Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra017768.1-P | Field mustard | cytosol | 98.27 | 98.27 |
| CDY42697 | Canola | cytosol | 97.58 | 97.58 |
| CDY65854 | Canola | nucleus | 84.78 | 84.78 |
| CDY24776 | Canola | cytosol | 84.43 | 83.28 |
| CDY35466 | Canola | cytosol | 83.39 | 82.25 |
| CDX75583 | Canola | cytosol | 40.48 | 74.52 |
| Solyc02g085300.2.1 | Tomato | cytosol | 51.21 | 68.52 |
| VIT_04s0023g01720.t01 | Wine grape | cytosol, mitochondrion | 68.17 | 67.93 |
| PGSC0003DMT400038571 | Potato | cytosol | 61.59 | 66.42 |
| KRH08288 | Soybean | cytosol | 66.44 | 64.86 |
| KRH69927 | Soybean | cytosol | 66.44 | 64.86 |
| GSMUA_AchrUn_... | Banana | cytosol | 57.79 | 58.6 |
| CDX73146 | Canola | cytosol | 58.13 | 58.13 |
| GSMUA_Achr4P03190_001 | Banana | cytosol | 52.94 | 54.64 |
| CDY38239 | Canola | cytosol | 11.76 | 53.97 |
| GSMUA_Achr8P26360_001 | Banana | cytosol | 55.36 | 53.87 |
| EER93541 | Sorghum | cytosol | 52.25 | 50.84 |
| Zm00001d033836_P001 | Maize | nucleus | 51.21 | 50.17 |
| KXG37682 | Sorghum | cytosol | 50.52 | 49.83 |
| Os03t0724100-01 | Rice | cytosol | 50.52 | 48.83 |
| KXG37681 | Sorghum | cytosol | 51.9 | 48.54 |
| TraesCS4D01G055100.1 | Wheat | cytosol | 34.95 | 48.33 |
| HORVU4Hr1G009210.2 | Barley | cytosol | 48.79 | 48.29 |
| TraesCS4A01G259700.1 | Wheat | cytosol | 48.79 | 48.29 |
| TraesCS4D01G055200.1 | Wheat | cytosol | 48.79 | 48.29 |
| TraesCS4B01G055000.1 | Wheat | cytosol | 48.1 | 47.6 |
| TraesCS4D01G055400.1 | Wheat | cytosol | 47.06 | 46.58 |
| TraesCS4A01G259600.1 | Wheat | cytosol | 47.06 | 46.58 |
| TraesCS4D01G055300.1 | Wheat | cytosol | 46.71 | 46.23 |
| TraesCS4A01G259500.1 | Wheat | cytosol | 46.71 | 46.23 |
| TraesCS4B01G055200.1 | Wheat | cytosol | 46.71 | 46.23 |
| TraesCS4B01G055100.1 | Wheat | cytosol | 44.64 | 45.58 |
| HORVU4Hr1G074380.1 | Barley | cytosol | 21.8 | 45.32 |
| HORVU4Hr1G009310.1 | Barley | cytosol | 45.67 | 45.21 |
| HORVU4Hr1G009190.1 | Barley | cytosol | 45.33 | 44.86 |
| HORVU4Hr1G005090.2 | Barley | cytosol | 20.07 | 44.62 |
| CDY45413 | Canola | cytosol | 58.48 | 43.9 |
| TraesCS7B01G089700.1 | Wheat | cytosol | 42.91 | 43.82 |
| HORVU6Hr1G021650.1 | Barley | cytosol, mitochondrion, nucleus | 20.76 | 43.17 |
| HORVU5Hr1G114590.3 | Barley | mitochondrion | 17.65 | 41.8 |
| CDY00428 | Canola | cytosol | 43.25 | 40.98 |
| CDY56380 | Canola | cytosol | 43.25 | 40.98 |
| Zm00001d033837_P001 | Maize | plastid | 42.21 | 40.94 |
| HORVU3Hr1G080050.1 | Barley | cytosol, mitochondrion, plastid | 21.45 | 39.74 |
| CDX90694 | Canola | cytosol | 41.52 | 38.84 |
| HORVU5Hr1G020290.3 | Barley | plastid | 20.42 | 38.56 |
| CDY21345 | Canola | cytosol | 42.56 | 38.2 |
| CDY05023 | Canola | cytosol | 41.18 | 37.9 |
| CDY12289 | Canola | cytosol | 24.91 | 34.12 |
| CDY38240 | Canola | peroxisome | 16.61 | 33.1 |
| CDY33738 | Canola | cytosol | 20.42 | 24.18 |
| CDX90047 | Canola | cytosol | 21.11 | 23.92 |
| CDX81674 | Canola | cytosol | 19.72 | 23.36 |
| CDY15164 | Canola | cytosol | 20.42 | 23.14 |
| CDY38020 | Canola | cytosol | 20.76 | 22.9 |
| CDY16746 | Canola | plastid | 19.03 | 21.65 |
| CDX87279 | Canola | plastid | 19.03 | 21.65 |
| CDY45292 | Canola | cytosol | 18.34 | 21.63 |
| CDY51766 | Canola | cytosol | 17.99 | 21.22 |
| CDY33739 | Canola | cytosol | 17.65 | 20.16 |
| CDX81673 | Canola | endoplasmic reticulum, golgi | 18.34 | 17.43 |
| CDY10026 | Canola | cytosol | 20.42 | 14.18 |
| CDY59787 | Canola | cytosol | 20.07 | 13.94 |
| CDX81672 | Canola | cytosol | 17.99 | 13.54 |
| CDY10638 | Canola | nucleus | 15.92 | 12.23 |
| CDY64658 | Canola | cytosol | 14.19 | 12.02 |
| CDY38325 | Canola | cytosol | 14.53 | 11.32 |
| CDY71148 | Canola | cytosol, mitochondrion, nucleus, plastid | 10.73 | 9.75 |
| CDY10103 | Canola | extracellular | 7.96 | 8.55 |
Protein Annotations
| EnsemblPlants:CDX72592 | EnsemblPlantsGene:GSBRNA2T00100135001 | Gene3D:3.40.525.10 | InterPro:CRAL-TRIO_dom | InterPro:CRAL-TRIO_dom_sf | InterPro:CRAL/TRIO_N_dom |
| InterPro:CRAL/TRIO_N_dom_sf | InterPro:IPR001251 | InterPro:IPR036865 | PANTHER:PTHR10174 | PANTHER:PTHR10174:SF206 | PFAM:PF00650 |
| PFscan:PS50191 | ProteinID:CDX72592 | ProteinID:CDX72592.1 | SMART:SM00516 | SMART:SM01100 | SUPFAM:SSF46938 |
| SUPFAM:SSF52087 | UniParc:UPI0004EE62CB | MapMan:35.2 | : | : | : |
Description
BnaC07g46140D
Coordinates
chrLK031796:-:2079427..2081244
Molecular Weight (calculated)
33233.3 Da
IEP (calculated)
6.685
GRAVY (calculated)
-0.651
Length
289 amino acids
Sequence
(BLAST)
(BLAST)
001: MSAHQLEDDS QQDNKVSKLK SALGPLSGHS LVFCSDASLR RYLDARSWNV ENAKQMIEET LKWRSTYKPH EIPWHEVAHE GETGKVSRAS FHDRQGRTVL
101: IMRPGLQNTT SAEGNIRHLV YLLENAIINL PKGQEQMSWL IDFTGWSMAN NAPMKTTRDI IYILQNHYPE RLGMSFLYNP PRLFQAGYKA VKYFLDPRTA
201: QKVNFVYPKD KASDELMRSH FDMENLPKEF GGEATLEYDH EEFSRQMFED DLKTAKFWGL EQKQYPIPNG FSPADVVREP ATSLASVAN
101: IMRPGLQNTT SAEGNIRHLV YLLENAIINL PKGQEQMSWL IDFTGWSMAN NAPMKTTRDI IYILQNHYPE RLGMSFLYNP PRLFQAGYKA VKYFLDPRTA
201: QKVNFVYPKD KASDELMRSH FDMENLPKEF GGEATLEYDH EEFSRQMFED DLKTAKFWGL EQKQYPIPNG FSPADVVREP ATSLASVAN
001: MFRRRNAHQL DNDDSQQDNK VRELKSAIGP LSGHSLVFCS DASLRRFLDA RNWDVEKAKK MIQETLKWRS TYKPQEIRWN QVAHEGETGK ASRASFHDRQ
101: GRVVLIMRPA MQNSTSQEGN IRHLVYLLEN AIINLPKGQK QMSWLIDFTG WSMAVNPPMK TTREIIHILQ NYYPERLGIA FLYNPPRLFQ AVYRAAKYFL
201: DPRTAEKVKF VYPKDKASDE LMTTHFDVEN LPKEFGGEAT LEYDHEDFSR QMYEDDLKTA KYWGLEGKHY PKTNGFSPSD VVPEPAIEIA SAAS
101: GRVVLIMRPA MQNSTSQEGN IRHLVYLLEN AIINLPKGQK QMSWLIDFTG WSMAVNPPMK TTREIIHILQ NYYPERLGIA FLYNPPRLFQ AVYRAAKYFL
201: DPRTAEKVKF VYPKDKASDE LMTTHFDVEN LPKEFGGEAT LEYDHEDFSR QMYEDDLKTA KYWGLEGKHY PKTNGFSPSD VVPEPAIEIA SAAS
Arabidopsis Description
At4g36640 [Source:UniProtKB/TrEMBL;Acc:O23217]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.