Factsheet for GSMUA_Achr4P03190_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_AchrUn_...	Banana	cytosol	71.43	70.18
GSMUA_Achr8P26360_001	Banana	cytosol	67.14	63.3
HORVU4Hr1G074380.1	Barley	cytosol	31.07	62.59
KRH51858	Soybean	nucleus, plastid	45.36	62.56
PGSC0003DMT400038571	Potato	cytosol	59.29	61.94
Os03t0724100-01	Rice	cytosol	65.71	61.54
Solyc02g085300.2.1	Tomato	cytosol	47.14	61.11
KRH15219	Soybean	cytosol	62.14	60.84
VIT_04s0023g01720.t01	Wine grape	cytosol, mitochondrion	62.86	60.69
Solyc12g089130.1.1	Tomato	cytosol	50.36	60.52
KRH05807	Soybean	cytosol	62.86	60.07
CDX73146	Canola	cytosol	61.79	59.86
Solyc04g080290.2.1	Tomato	cytosol	61.07	59.58
PGSC0003DMT400013200	Potato	cytosol	60.71	59.23
HORVU4Hr1G005090.2	Barley	cytosol	27.5	59.23
TraesCS4A01G259700.1	Wheat	cytosol	61.07	58.56
KXG37682	Sorghum	cytosol	61.07	58.36
TraesCS4D01G055200.1	Wheat	cytosol	60.71	58.22
AT1G75170.1	Thale cress	cytosol	61.43	58.11
TraesCS4B01G055000.1	Wheat	cytosol	60.0	57.53
TraesCS4D01G055100.1	Wheat	cytosol	42.5	56.94
HORVU6Hr1G021650.1	Barley	cytosol, mitochondrion, nucleus	28.21	56.83
VIT_18s0001g12420.t01	Wine grape	cytosol	63.57	56.51
HORVU4Hr1G009210.2	Barley	cytosol	58.93	56.51
Zm00001d033836_P001	Maize	nucleus	58.93	55.93
KRH61179	Soybean	cytosol	36.07	55.8
CDY24776	Canola	cytosol	58.21	55.63
Bra010566.1-P	Field mustard	cytosol	58.21	55.63
EER93541	Sorghum	cytosol	58.93	55.56
TraesCS4D01G055300.1	Wheat	cytosol	57.86	55.48
KRH69927	Soybean	cytosol	58.57	55.41
TraesCS4A01G259600.1	Wheat	cytosol	57.5	55.14
HORVU5Hr1G114590.3	Barley	mitochondrion	23.93	54.92
HORVU4Hr1G009190.1	Barley	cytosol	57.14	54.79
CDY65854	Canola	nucleus	56.43	54.67
CDY35466	Canola	cytosol	57.14	54.61
TraesCS4A01G259500.1	Wheat	cytosol	56.79	54.45
TraesCS4B01G055100.1	Wheat	cytosol	55.0	54.42
KRH08288	Soybean	cytosol	57.5	54.39
HORVU4Hr1G009310.1	Barley	cytosol	56.43	54.11
TraesCS4D01G055400.1	Wheat	cytosol	56.43	54.11
KXG37681	Sorghum	cytosol	59.29	53.72
Bra011696.1-P	Field mustard	nucleus	55.36	53.45
TraesCS4B01G055200.1	Wheat	cytosol	55.71	53.42
CDY42697	Canola	cytosol	55.0	53.29
TraesCS7B01G089700.1	Wheat	cytosol	53.57	53.0
CDX72592	Canola	cytosol	54.64	52.94
Bra017768.1-P	Field mustard	cytosol	54.64	52.94
CDX75583	Canola	cytosol	29.64	52.87
HORVU3Hr1G080050.1	Barley	cytosol, mitochondrion, plastid	28.93	51.92
AT4G36640.3	Thale cress	cytosol	53.93	51.36
HORVU5Hr1G020290.3	Barley	plastid	27.86	50.98
Bra015863.1-P	Field mustard	cytosol	61.79	45.05
CDY45413	Canola	cytosol	61.79	44.94
Zm00001d033837_P001	Maize	plastid	47.14	44.3
GSMUA_Achr10P...	Banana	cytosol, nucleus, plastid	44.64	39.68
GSMUA_Achr8P01630_001	Banana	cytosol	48.93	39.37
GSMUA_Achr3P04420_001	Banana	cytosol	45.0	37.72
GSMUA_Achr10P...	Banana	nucleus	49.64	36.48
GSMUA_Achr9P17070_001	Banana	cytosol	47.14	31.88
GSMUA_Achr11P...	Banana	cytosol	26.79	30.49
GSMUA_Achr8P00480_001	Banana	cytosol	21.79	27.23
GSMUA_Achr4P15920_001	Banana	cytosol	24.29	25.86
GSMUA_Achr3P14480_001	Banana	mitochondrion	17.5	18.7
GSMUA_Achr3P29630_001	Banana	cytosol	25.0	16.36
GSMUA_Achr7P27040_001	Banana	cytosol	24.64	15.86
GSMUA_Achr6P25200_001	Banana	cytosol	23.93	15.73
GSMUA_Achr5P08620_001	Banana	nucleus	23.93	14.44

Protein Annotations

EnsemblPlants:GSMUA_Achr4P03190_001	EnsemblPlants:GSMUA_Achr4T03190_001	EnsemblPlantsGene:GSMUA_Achr4G03190_001	Gene3D:3.40.525.10	InterPro:CRAL-TRIO_dom	InterPro:CRAL-TRIO_dom_sf
InterPro:CRAL/TRIO_N_dom	InterPro:CRAL/TRIO_N_dom_sf	InterPro:IPR001251	InterPro:IPR036865	ncoils:Coil	PANTHER:PTHR10174
PANTHER:PTHR10174:SF206	PFAM:PF00650	PFAM:PF03765	PFscan:PS50191	SMART:SM00516	SMART:SM01100
SUPFAM:SSF46938	SUPFAM:SSF52087	UniParc:UPI000295C0EF	UniProt:M0SKN6	MapMan:35.2	:

Description

Putative Random slug protein 5 [Source:GMGC_GENE;Acc:GSMUA_Achr4G03190_001]

Coordinates

chr4:-:2564285..2565940

Molecular Weight (calculated)

32701.0 Da

IEP (calculated)

8.317

GRAVY (calculated)

-0.680

Length

280 amino acids

Sequence
(BLAST)

001: MFRKKHNSHD NQEHDAKDQE QKIKELRAAI GPLSGSSLTF CTDACLRRYL EARNWNVDKS KKMLEETLKW RTTYKPEEIL WHEVATESET GKLYRANFHD
101: REGRTVIVMR PAKQNTSSHD NQLRHLVYVL ENALLSLPED QEQMVCLIDF TGWSLSNSPI KTARETANIL QCHYPERLAV GFLYNPPRIF ETFWKVVKYF
201: LDSKTFLKAK FIYPKNKESM ELLRKHFDLD VLPVEFGGRN QVQYNHEEFS KMMIAEDTVK ASLRSSEEKT PQPGLAVQAS

Best Arabidopsis Sequence Match ( AT1G75170.1 )
(BLAST)

001: MFRWKNSSQT EQEQKEAALR EAKMKELKTL IGQLSGRNSL YCSDACLKRY LEARNWNVGK AKKMLEETLK WRSSFKPEEI RWNEVSGEGE TGKVYKAGFH
101: DRHGRTVLIL RPGLQNTKSL ENQMKHLVYL IENAILNLPE DQEQMSWLID FTGWSMSTSV PIKSARETIN ILQNHYPERL AVAFLYNPPR LFEAFWKIVK
201: YFIDAKTFVK VKFVYPKNSE SVELMSTFFD EENLPTEFGG KALLQYNYEE FSKQMNQDDV KTANFWGLGH SNNNQLHASN GFSGAEIAPE PIQNHP

Arabidopsis Description

Sec14p-like phosphatidylinositol transfer family protein [Source:UniProtKB/TrEMBL;Acc:Q9FRK8]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.