Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr3P29630_001 | Banana | cytosol | 80.0 | 81.31 |
| GSMUA_Achr6P25200_001 | Banana | cytosol | 68.51 | 69.95 |
| Os03t0219100-01 | Rice | cytosol | 67.82 | 67.35 |
| GSMUA_Achr5P08620_001 | Banana | nucleus | 69.89 | 65.52 |
| VIT_05s0020g03350.t01 | Wine grape | cytosol | 61.84 | 63.59 |
| KRH35529 | Soybean | cytosol | 58.39 | 62.87 |
| EER95261 | Sorghum | cytosol | 64.14 | 62.84 |
| TraesCS4D01G242900.1 | Wheat | cytosol | 64.83 | 62.81 |
| KRG91288 | Soybean | cytosol | 57.93 | 62.38 |
| TraesCS4B01G243300.1 | Wheat | cytosol | 64.6 | 62.17 |
| TraesCS4A01G065900.1 | Wheat | cytosol | 64.83 | 61.44 |
| Zm00001d028231_P003 | Maize | cytosol | 63.68 | 61.28 |
| Zm00001d048066_P001 | Maize | cytosol | 61.38 | 61.1 |
| PGSC0003DMT400077340 | Potato | cytosol | 57.93 | 59.57 |
| Solyc09g075970.2.1 | Tomato | cytosol | 57.01 | 58.63 |
| AT1G05370.1 | Thale cress | cytosol | 54.48 | 56.83 |
| Bra032465.1-P | Field mustard | cytosol | 54.02 | 56.49 |
| CDY59787 | Canola | cytosol | 53.79 | 56.25 |
| CDY10026 | Canola | cytosol | 53.79 | 56.25 |
| CDY64658 | Canola | cytosol | 43.91 | 56.01 |
| Bra015421.1-P | Field mustard | cytosol | 50.8 | 54.98 |
| Bra039949.1-P | Field mustard | cytosol | 49.2 | 53.37 |
| AT3G22410.1 | Thale cress | cytosol | 48.74 | 53.0 |
| Bra023828.1-P | Field mustard | nucleus | 48.05 | 51.6 |
| CDY10103 | Canola | extracellular | 31.72 | 51.3 |
| HORVU4Hr1G067410.4 | Barley | plastid | 58.16 | 50.7 |
| CDY71148 | Canola | cytosol, mitochondrion, nucleus, plastid | 36.32 | 49.69 |
| CDY38325 | Canola | cytosol | 40.92 | 47.98 |
| CDY10638 | Canola | nucleus | 34.25 | 39.63 |
| GSMUA_Achr4P03190_001 | Banana | cytosol | 15.86 | 24.64 |
| GSMUA_Achr11P... | Banana | cytosol | 13.1 | 23.17 |
| GSMUA_AchrUn_... | Banana | cytosol | 15.17 | 23.16 |
| GSMUA_Achr8P00480_001 | Banana | cytosol | 11.72 | 22.77 |
| GSMUA_Achr8P26360_001 | Banana | cytosol | 15.17 | 22.22 |
| GSMUA_Achr10P... | Banana | cytosol, nucleus, plastid | 14.94 | 20.63 |
| GSMUA_Achr4P15920_001 | Banana | cytosol | 11.95 | 19.77 |
| GSMUA_Achr8P01630_001 | Banana | cytosol | 15.4 | 19.25 |
| GSMUA_Achr3P14480_001 | Banana | mitochondrion | 11.49 | 19.08 |
| GSMUA_Achr3P04420_001 | Banana | cytosol | 14.25 | 18.56 |
| GSMUA_Achr10P... | Banana | nucleus | 15.4 | 17.59 |
| GSMUA_Achr9P17070_001 | Banana | cytosol | 15.4 | 16.18 |
Protein Annotations
| EnsemblPlants:GSMUA_Achr7P27040_001 | EnsemblPlants:GSMUA_Achr7T27040_001 | EnsemblPlantsGene:GSMUA_Achr7G27040_001 | Gene3D:3.40.525.10 | InterPro:CRAL-TRIO_dom | InterPro:CRAL-TRIO_dom_sf |
| InterPro:CRAL/TRIO_N_dom_sf | InterPro:IPR001251 | InterPro:IPR036865 | PANTHER:PTHR10174 | PANTHER:PTHR10174:SF132 | PFAM:PF00650 |
| PFscan:PS50191 | SEG:seg | SMART:SM00516 | SUPFAM:SSF46938 | SUPFAM:SSF52087 | UniParc:UPI000294D276 |
| UniProt:M0TL40 | MapMan:35.2 | : | : | : | : |
Description
SEC14 cytosolic factor family protein, putative, expressed [Source:GMGC_GENE;Acc:GSMUA_Achr7G27040_001]
Coordinates
chr7:+:28210479..28212952
Molecular Weight (calculated)
48788.6 Da
IEP (calculated)
10.503
GRAVY (calculated)
-0.281
Length
435 amino acids
Sequence
(BLAST)
(BLAST)
001: MGTEMKGPKD RERIESVLKM LKKQAPVTVK QEKFCNDACV ERFLIAKGNN VKKAAKQLRT ALSWRESIGT DHLIADEFSE ELGSGLAYVA GHDDEARPVM
101: VFRIRQDYPK THTQKSFVRL LVFTLEVAIS SMSRFVDQFV ILFDARFFKS ASAFLNLFVG TLKIISEYYP GRLHKAFVID PPSLFSYLWK GVRPFVDLSA
201: VAAAVASLDF DDSLDDAAFA AYPTRTASLR FDPAVAATTT TKVGGSASSR FSFTVSHFDS LKPWYLSTTT TTAPRAVAPT ASPSLIGASP LNARSFSFAS
301: PAARSMPRAG IAYAPACRSI PSTPCSFPLP KQPRQHQQPP RTPRPSFLQS PATLFSFRKE GQVVPSRGER ERESFLPYLR FYRRPYDEMV YRAKMRPPLG
401: GLISIISPHL NNQQRQQQRC NAINIRHQRM QHLNY
101: VFRIRQDYPK THTQKSFVRL LVFTLEVAIS SMSRFVDQFV ILFDARFFKS ASAFLNLFVG TLKIISEYYP GRLHKAFVID PPSLFSYLWK GVRPFVDLSA
201: VAAAVASLDF DDSLDDAAFA AYPTRTASLR FDPAVAATTT TKVGGSASSR FSFTVSHFDS LKPWYLSTTT TTAPRAVAPT ASPSLIGASP LNARSFSFAS
301: PAARSMPRAG IAYAPACRSI PSTPCSFPLP KQPRQHQQPP RTPRPSFLQS PATLFSFRKE GQVVPSRGER ERESFLPYLR FYRRPYDEMV YRAKMRPPLG
401: GLISIISPHL NNQQRQQQRC NAINIRHQRM QHLNY
001: MGKKEQKDHH SVVESDDKVE AVLHLLRKHS PLTLKQEKFC NRACVGRFLR IKGDNVKKAA KQLRSCLSWR SSLGIESLIA DEFTAELAEG LAYVAGLDDE
101: CRPVLVFRIK QDYQKLHTQK QLTRLVVFTL EVAISTMSRN VEQFVILFDA SFFKSASAFM NILVTTLKIV AEYYPCRLFK TFVIDPPSLF SYLWKGIRTF
201: VDLSTATMIV SMQDFQDSFD YDDFSSSYPS RVSSLRFDTS SLKSTDKIGS CASSRFAFTV SRDGLDTVKP WCLTLTDTSS TKLGHNTGAY ISPLNARSFS
301: FASPAARSEP FGGPRRSFFA STPMPARTTD RHSIGTLRDP RIPRPSFFQS PAIFFRRESH VSKSEKPRDS FVQFLKFYRR PYDEMTYRSK MRPPLGGLVS
401: IVSTQIRRRH VSLSQRF
101: CRPVLVFRIK QDYQKLHTQK QLTRLVVFTL EVAISTMSRN VEQFVILFDA SFFKSASAFM NILVTTLKIV AEYYPCRLFK TFVIDPPSLF SYLWKGIRTF
201: VDLSTATMIV SMQDFQDSFD YDDFSSSYPS RVSSLRFDTS SLKSTDKIGS CASSRFAFTV SRDGLDTVKP WCLTLTDTSS TKLGHNTGAY ISPLNARSFS
301: FASPAARSEP FGGPRRSFFA STPMPARTTD RHSIGTLRDP RIPRPSFFQS PAIFFRRESH VSKSEKPRDS FVQFLKFYRR PYDEMTYRSK MRPPLGGLVS
401: IVSTQIRRRH VSLSQRF
Arabidopsis Description
Sec14p-like phosphatidylinositol transfer family protein [Source:UniProtKB/TrEMBL;Acc:F4I8Q8]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.