CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 4
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH35529	Soybean	cytosol	95.05	95.05
VIT_05s0020g03350.t01	Wine grape	cytosol	78.71	75.18
Solyc09g075970.2.1	Tomato	cytosol	71.29	68.09
PGSC0003DMT400077340	Potato	cytosol	71.29	68.09
Bra039949.1-P	Field mustard	cytosol	61.39	61.85
AT3G22410.1	Thale cress	cytosol	60.64	61.25
GSMUA_Achr3P29630_001	Banana	cytosol	62.13	58.64
GSMUA_Achr7P27040_001	Banana	cytosol	62.38	57.93
Bra023828.1-P	Field mustard	nucleus	57.67	57.53
CDY38325	Canola	cytosol	51.49	56.06
GSMUA_Achr6P25200_001	Banana	cytosol	58.91	55.87
Os03t0219100-01	Rice	cytosol	59.9	55.25
CDY71148	Canola	cytosol, mitochondrion, nucleus, plastid	43.32	55.03
EER95261	Sorghum	cytosol	57.43	52.25
Zm00001d028231_P003	Maize	cytosol	58.17	51.99
Zm00001d048066_P001	Maize	cytosol	55.69	51.49
GSMUA_Achr5P08620_001	Banana	nucleus	57.92	50.43
TraesCS4D01G242900.1	Wheat	cytosol	55.45	49.89
TraesCS4B01G243300.1	Wheat	cytosol	55.2	49.34
TraesCS4A01G065900.1	Wheat	cytosol	55.69	49.02
CDY10638	Canola	nucleus	39.11	42.02
HORVU4Hr1G067410.4	Barley	plastid	50.99	41.28
KRH41051	Soybean	cytosol	15.35	25.0
KRH51858	Soybean	nucleus, plastid	12.13	24.14
KRH64923	Soybean	nucleus	15.84	22.46
KRH15219	Soybean	cytosol	15.84	22.38
KRH69927	Soybean	cytosol	16.34	22.3
KRH08288	Soybean	cytosol	16.09	21.96
KRH53100	Soybean	cytosol	14.85	21.9
KRH63881	Soybean	cytosol	14.11	21.59
KRH62380	Soybean	cytosol	14.6	21.53
KRH05807	Soybean	cytosol	15.59	21.5
KRH54081	Soybean	cytosol	13.86	21.13
KRH16691	Soybean	cytosol	16.83	20.48
KRH61179	Soybean	cytosol	9.16	20.44
KRH18888	Soybean	cytosol	16.58	20.12
KRH59732	Soybean	endoplasmic reticulum, golgi	14.11	19.93
KRH57102	Soybean	cytosol, plastid	12.87	19.85
KRH03256	Soybean	endoplasmic reticulum, plastid	12.62	19.47
KRH62383	Soybean	cytosol	15.84	18.66
KRH70361	Soybean	cytosol	11.39	18.62

Protein Annotations

EMBL:ACUP02012674	EnsemblPlants:KRG91288	EnsemblPlantsGene:GLYMA_20G145500	EntrezGene:100803115	Gene3D:3.40.525.10	InterPro:CRAL-TRIO_dom
InterPro:CRAL-TRIO_dom_sf	InterPro:CRAL/TRIO_N_dom_sf	InterPro:IPR001251	InterPro:IPR036865	PANTHER:PTHR10174	PANTHER:PTHR10174:SF132
PFAM:PF00650	PFscan:PS50191	ProteinID:KRG91288	ProteinID:KRG91288.1	SEG:seg	SMART:SM00516
SUPFAM:SSF46938	SUPFAM:SSF52087	UniParc:UPI0001D64F91	UniProt:I1NGE4	MapMan:35.2	:

Description

hypothetical protein

Coordinates

chr20:-:38391819..38396311

Molecular Weight (calculated)

45434.9 Da

IEP (calculated)

10.337

GRAVY (calculated)

-0.186

Length

404 amino acids

Sequence
(BLAST)

001: MGKKTELKDH KEIAKVETVL ELLRKQTPLT VKQEKFCNYA CVKRFLKAKG DSVKKASKQL KACLAWRESV IADHLIADDF SAELADGLAY LAGHDDESRP
101: VMIFRLKQDY QKLHSQKMFT RLLAFTIEVA ISTMPKNVEQ FVMLFDASFY RSASAFMNLL LPALKIVAEY YPGRLCKAFV IDPPSLFAYL WKGVRPFVEL
201: SSWTTVVSSL DFEESLDFND FAAYPRASSL RFDSASVKST AKIGSCSSSR FSFTVSHHLD SLKPWYLSLA DTSASKVGPT SPSAALISPL NARSLSFASP
301: VARTPRGPPA TRKGLFPSTP LPQRVTAPPR TSFLQSPATF FRRDSHVAAK GERCRESFLP YVKFYRRPYD EMVYRSKMRP PLGGLISIVS PHITRRHVSV
401: SQRF

Best Arabidopsis Sequence Match ( AT1G05370.1 )
(BLAST)

001: MGKKEQKDHH SVVESDDKVE AVLHLLRKHS PLTLKQEKFC NRACVGRFLR IKGDNVKKAA KQLRSCLSWR SSLGIESLIA DEFTAELAEG LAYVAGLDDE
101: CRPVLVFRIK QDYQKLHTQK QLTRLVVFTL EVAISTMSRN VEQFVILFDA SFFKSASAFM NILVTTLKIV AEYYPCRLFK TFVIDPPSLF SYLWKGIRTF
201: VDLSTATMIV SMQDFQDSFD YDDFSSSYPS RVSSLRFDTS SLKSTDKIGS CASSRFAFTV SRDGLDTVKP WCLTLTDTSS TKLGHNTGAY ISPLNARSFS
301: FASPAARSEP FGGPRRSFFA STPMPARTTD RHSIGTLRDP RIPRPSFFQS PAIFFRRESH VSKSEKPRDS FVQFLKFYRR PYDEMTYRSK MRPPLGGLVS
401: IVSTQIRRRH VSLSQRF

Arabidopsis Description

Sec14p-like phosphatidylinositol transfer family protein [Source:UniProtKB/TrEMBL;Acc:F4I8Q8]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.