Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400077340 | Potato | cytosol | 95.98 | 95.98 |
| VIT_05s0020g03350.t01 | Wine grape | cytosol | 74.23 | 74.23 |
| KRH35529 | Soybean | cytosol | 69.27 | 72.52 |
| KRG91288 | Soybean | cytosol | 68.09 | 71.29 |
| Bra039949.1-P | Field mustard | cytosol | 57.92 | 61.1 |
| AT3G22410.1 | Thale cress | cytosol | 56.74 | 60.0 |
| Os03t0219100-01 | Rice | cytosol | 59.1 | 57.08 |
| GSMUA_Achr7P27040_001 | Banana | cytosol | 58.63 | 57.01 |
| GSMUA_Achr3P29630_001 | Banana | cytosol | 57.68 | 57.01 |
| EER95261 | Sorghum | cytosol | 58.63 | 55.86 |
| GSMUA_Achr6P25200_001 | Banana | cytosol | 56.03 | 55.63 |
| Bra023828.1-P | Field mustard | nucleus | 53.19 | 55.56 |
| Zm00001d028231_P003 | Maize | cytosol | 58.87 | 55.09 |
| CDY38325 | Canola | cytosol | 47.99 | 54.72 |
| Zm00001d048066_P001 | Maize | cytosol | 56.5 | 54.69 |
| CDY71148 | Canola | cytosol, mitochondrion, nucleus, plastid | 40.19 | 53.46 |
| TraesCS4D01G242900.1 | Wheat | cytosol | 56.03 | 52.78 |
| TraesCS4B01G243300.1 | Wheat | cytosol | 55.79 | 52.21 |
| TraesCS4A01G065900.1 | Wheat | cytosol | 55.79 | 51.42 |
| GSMUA_Achr5P08620_001 | Banana | nucleus | 55.79 | 50.86 |
| HORVU4Hr1G067410.4 | Barley | plastid | 51.06 | 43.29 |
| CDY10638 | Canola | nucleus | 36.88 | 41.49 |
| Solyc12g089130.1.1 | Tomato | cytosol | 12.77 | 23.18 |
| Solyc04g072810.2.1 | Tomato | cytosol | 17.73 | 23.01 |
| Solyc04g080290.2.1 | Tomato | cytosol | 15.37 | 22.65 |
| Solyc03g118150.2.1 | Tomato | cytosol | 14.18 | 22.14 |
| Solyc02g085300.2.1 | Tomato | cytosol | 10.87 | 21.3 |
| Solyc01g005290.2.1 | Tomato | cytosol | 9.93 | 21.21 |
| Solyc09g098600.2.1 | Tomato | cytosol | 14.42 | 20.0 |
| Solyc01g005260.2.1 | Tomato | cytosol | 11.35 | 20.0 |
| Solyc06g068800.2.1 | Tomato | cytosol | 14.42 | 19.74 |
| Solyc01g005280.2.1 | Tomato | cytosol | 11.11 | 19.58 |
| Solyc01g005270.2.1 | Tomato | cytosol | 11.11 | 19.58 |
| Solyc03g112640.2.1 | Tomato | plastid | 11.58 | 18.7 |
Protein Annotations
| EnsemblPlants:Solyc09g075970.2.1 | EnsemblPlantsGene:Solyc09g075970.2 | Gene3D:3.40.525.10 | InterPro:CRAL-TRIO_dom | InterPro:CRAL-TRIO_dom_sf | InterPro:CRAL/TRIO_N_dom_sf |
| InterPro:IPR001251 | InterPro:IPR036865 | PANTHER:PTHR10174 | PANTHER:PTHR10174:SF132 | PFAM:PF00650 | PFscan:PS50191 |
| SEG:seg | SMART:SM00516 | SUPFAM:SSF46938 | SUPFAM:SSF52087 | UniParc:UPI000276BD6F | UniProt:K4CVH4 |
| MapMan:35.2 | : | : | : | : | : |
Description
No Description!
Coordinates
chr9:-:67613088..67616775
Molecular Weight (calculated)
48068.8 Da
IEP (calculated)
10.343
GRAVY (calculated)
-0.377
Length
423 amino acids
Sequence
(BLAST)
(BLAST)
001: MGKKEQINDE KHKNTEKVQS VLQLLKKQAP LSVKQEKLCN GDCVERFLKV KGENVKKAAK HLRNCLNWRD SLGIDHLIAD EFSAELAEGV AYVSGHDDES
101: RPVLIFRIKQ DYQKFHSQKL FTRLLVFTLE VAIQTMARSV EQFVILFDAS FFRSASAFMN ILLASLKIIA DYYPGRLHKA FVIDPPSLFS YLWKGVKTFV
201: DLAPLTMVVS SLDFEESLEF NDFTAYPRAA SLRFNPSSIS SNGKIGSCSS SRFSFTVSHH FDSVKPWYLS LTDTSSAKVG PTTNMGPAIS PLNARSHSFA
301: SPIDRTPRGN NNIGPMKKGF FPSTPLPQKS KDMVDHSEIH HPRAHRPSFF QSPAMFFKRD GGKGQTISRV DKCRESFQPF LKFYRRPYDE MIYRSKMRPP
401: LGGLISIVSP HIRRRHMSAS QRF
101: RPVLIFRIKQ DYQKFHSQKL FTRLLVFTLE VAIQTMARSV EQFVILFDAS FFRSASAFMN ILLASLKIIA DYYPGRLHKA FVIDPPSLFS YLWKGVKTFV
201: DLAPLTMVVS SLDFEESLEF NDFTAYPRAA SLRFNPSSIS SNGKIGSCSS SRFSFTVSHH FDSVKPWYLS LTDTSSAKVG PTTNMGPAIS PLNARSHSFA
301: SPIDRTPRGN NNIGPMKKGF FPSTPLPQKS KDMVDHSEIH HPRAHRPSFF QSPAMFFKRD GGKGQTISRV DKCRESFQPF LKFYRRPYDE MIYRSKMRPP
401: LGGLISIVSP HIRRRHMSAS QRF
001: MGKKEQKDHH SVVESDDKVE AVLHLLRKHS PLTLKQEKFC NRACVGRFLR IKGDNVKKAA KQLRSCLSWR SSLGIESLIA DEFTAELAEG LAYVAGLDDE
101: CRPVLVFRIK QDYQKLHTQK QLTRLVVFTL EVAISTMSRN VEQFVILFDA SFFKSASAFM NILVTTLKIV AEYYPCRLFK TFVIDPPSLF SYLWKGIRTF
201: VDLSTATMIV SMQDFQDSFD YDDFSSSYPS RVSSLRFDTS SLKSTDKIGS CASSRFAFTV SRDGLDTVKP WCLTLTDTSS TKLGHNTGAY ISPLNARSFS
301: FASPAARSEP FGGPRRSFFA STPMPARTTD RHSIGTLRDP RIPRPSFFQS PAIFFRRESH VSKSEKPRDS FVQFLKFYRR PYDEMTYRSK MRPPLGGLVS
401: IVSTQIRRRH VSLSQRF
101: CRPVLVFRIK QDYQKLHTQK QLTRLVVFTL EVAISTMSRN VEQFVILFDA SFFKSASAFM NILVTTLKIV AEYYPCRLFK TFVIDPPSLF SYLWKGIRTF
201: VDLSTATMIV SMQDFQDSFD YDDFSSSYPS RVSSLRFDTS SLKSTDKIGS CASSRFAFTV SRDGLDTVKP WCLTLTDTSS TKLGHNTGAY ISPLNARSFS
301: FASPAARSEP FGGPRRSFFA STPMPARTTD RHSIGTLRDP RIPRPSFFQS PAIFFRRESH VSKSEKPRDS FVQFLKFYRR PYDEMTYRSK MRPPLGGLVS
401: IVSTQIRRRH VSLSQRF
Arabidopsis Description
Sec14p-like phosphatidylinositol transfer family protein [Source:UniProtKB/TrEMBL;Acc:F4I8Q8]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.