Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400024527 | Potato | cytosol | 91.1 | 90.0 |
| CDY38239 | Canola | cytosol | 13.19 | 68.25 |
| Bra012311.1-P | Field mustard | cytosol | 53.99 | 57.7 |
| CDY00428 | Canola | cytosol | 53.99 | 57.7 |
| CDY56380 | Canola | cytosol | 53.68 | 57.38 |
| CDY38240 | Canola | peroxisome | 24.23 | 54.48 |
| AT1G22180.4 | Thale cress | cytosol | 52.15 | 54.14 |
| Bra031370.1-P | Field mustard | cytosol | 53.07 | 53.73 |
| CDY21345 | Canola | cytosol | 53.07 | 53.73 |
| KRH18888 | Soybean | cytosol | 54.6 | 53.45 |
| Bra000655.1-P | Field mustard | cytosol | 50.61 | 53.4 |
| GSMUA_Achr10P... | Banana | cytosol, nucleus, plastid | 51.53 | 53.33 |
| KRH16691 | Soybean | cytosol | 54.29 | 53.31 |
| KRH53100 | Soybean | cytosol | 44.79 | 53.28 |
| AT4G08690.2 | Thale cress | cytosol | 48.77 | 52.82 |
| CDX90694 | Canola | cytosol | 50.0 | 52.75 |
| CDY05023 | Canola | cytosol | 50.0 | 51.91 |
| KRH62380 | Soybean | cytosol | 43.56 | 51.82 |
| VIT_18s0001g05080.t01 | Wine grape | nucleus | 55.52 | 50.14 |
| GSMUA_Achr3P04420_001 | Banana | cytosol | 50.0 | 48.8 |
| CDY12289 | Canola | cytosol | 30.67 | 47.39 |
| Solyc09g098600.2.1 | Tomato | cytosol | 43.87 | 46.89 |
| Solyc12g089130.1.1 | Tomato | cytosol | 33.13 | 46.35 |
| EES05517 | Sorghum | cytosol | 49.39 | 46.0 |
| Zm00001d052231_P003 | Maize | cytosol | 48.47 | 45.14 |
| KRH62383 | Soybean | cytosol | 47.24 | 44.9 |
| Solyc02g085300.2.1 | Tomato | cytosol | 29.14 | 43.98 |
| Os02t0752000-01 | Rice | cytosol | 50.92 | 43.92 |
| Solyc04g080290.2.1 | Tomato | cytosol | 38.04 | 43.21 |
| TraesCS6D01G281700.1 | Wheat | nucleus | 47.55 | 39.44 |
| TraesCS6B01G331400.1 | Wheat | nucleus | 48.47 | 39.21 |
| HORVU6Hr1G075070.1 | Barley | nucleus | 48.47 | 39.21 |
| TraesCS6A01G302200.1 | Wheat | nucleus | 48.16 | 38.96 |
| Solyc01g005290.2.1 | Tomato | cytosol | 16.56 | 27.27 |
| Solyc03g118150.2.1 | Tomato | cytosol | 21.78 | 26.2 |
| Solyc01g005260.2.1 | Tomato | cytosol | 18.71 | 25.42 |
| Solyc01g005280.2.1 | Tomato | cytosol | 18.1 | 24.58 |
| Solyc01g005270.2.1 | Tomato | cytosol | 17.48 | 23.75 |
| Solyc06g068800.2.1 | Tomato | cytosol | 19.94 | 21.04 |
| Solyc03g112640.2.1 | Tomato | plastid | 16.87 | 20.99 |
| Solyc09g075970.2.1 | Tomato | cytosol | 23.01 | 17.73 |
Protein Annotations
| EnsemblPlants:Solyc04g072810.2.1 | EnsemblPlantsGene:Solyc04g072810.2 | Gene3D:3.40.525.10 | InterPro:CRAL-TRIO_dom | InterPro:CRAL-TRIO_dom_sf | InterPro:CRAL/TRIO_N_dom_sf |
| InterPro:IPR001251 | InterPro:IPR036865 | PANTHER:PTHR10174 | PANTHER:PTHR10174:SF202 | PFAM:PF00650 | PFscan:PS50191 |
| SEG:seg | SMART:SM00516 | SUPFAM:SSF46938 | SUPFAM:SSF52087 | UniParc:UPI000276718F | UniProt:K4BTR8 |
| MapMan:35.2 | : | : | : | : | : |
Description
No Description!
Coordinates
chr4:-:59777492..59782755
Molecular Weight (calculated)
37239.0 Da
IEP (calculated)
4.653
GRAVY (calculated)
-0.665
Length
326 amino acids
Sequence
(BLAST)
(BLAST)
001: MPNGLENSLK PEEERNKIDE MRKLIGPLSG KLALYCSDAS ISRYLAAQSW NVKKAAKMLK ASLKWRLDFM PEEIRWDDVA SEAETGKIYR SNYKDKHGRP
101: VLVMRPRCQN TKSLEGQMKY LVYCLENAVV NLPKDQEQMI WLIDFHGFTL SNLSIKVTKE TAHILEDYYP ERLGIAILYD PPKIFEPFWK LAKPFLDPKT
201: ASKVHFMYSD DPNSKKMMEE MFDMSLVESA FGGDDKADFD VNKYAERMRE DDEKLSSFWK KDDNSASNAQ LTVTADPSLE PTNSDSDSEV LDEKVEKPSL
301: DVDEEESSIE ETLPGSNSTN ANVKAV
101: VLVMRPRCQN TKSLEGQMKY LVYCLENAVV NLPKDQEQMI WLIDFHGFTL SNLSIKVTKE TAHILEDYYP ERLGIAILYD PPKIFEPFWK LAKPFLDPKT
201: ASKVHFMYSD DPNSKKMMEE MFDMSLVESA FGGDDKADFD VNKYAERMRE DDEKLSSFWK KDDNSASNAQ LTVTADPSLE PTNSDSDSEV LDEKVEKPSL
301: DVDEEESSIE ETLPGSNSTN ANVKAV
001: MNSDSNKSSS NGFEKSLTPE EYLNKINEVR TLLGPLTEKS SEFCSDAAIT RYLAARNGHV KKATKMLKET LKWRAQYKPE EIRWEEIARE AETGKIYRAN
101: CTDKYGRTVL VMRPSCQNTK SYKGQIRILV YCMENAILNL PDNQEQMVWL IDFHGFNMSH ISLKVSRETA HVLQEHYPER LGLAIVYNPP KIFESFYKMV
201: KPFLEPKTSN KVKFVYSDDN LSNKLLEDLF DMEQLEVAFG GKNSDAGFNF EKYAERMRED DLKFYGNTTV SSTSAHLTNS DSEVSDSEMK YLEDKEDETI
301: ENGTLQSPLD TTKT
101: CTDKYGRTVL VMRPSCQNTK SYKGQIRILV YCMENAILNL PDNQEQMVWL IDFHGFNMSH ISLKVSRETA HVLQEHYPER LGLAIVYNPP KIFESFYKMV
201: KPFLEPKTSN KVKFVYSDDN LSNKLLEDLF DMEQLEVAFG GKNSDAGFNF EKYAERMRED DLKFYGNTTV SSTSAHLTNS DSEVSDSEMK YLEDKEDETI
301: ENGTLQSPLD TTKT
Arabidopsis Description
F16L1.9 protein [Source:UniProtKB/TrEMBL;Acc:Q9LM14]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.