Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 2
- mitochondrion 1
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra000655.1-P | Field mustard | cytosol | 95.86 | 97.41 |
| CDX90694 | Canola | cytosol | 95.54 | 97.09 |
| CDY12289 | Canola | cytosol | 61.47 | 91.47 |
| AT4G08690.2 | Thale cress | cytosol | 85.67 | 89.37 |
| CDY38239 | Canola | cytosol | 14.33 | 71.43 |
| CDY00428 | Canola | cytosol | 59.24 | 60.98 |
| CDY56380 | Canola | cytosol | 57.96 | 59.67 |
| KRH18888 | Soybean | cytosol | 60.19 | 56.76 |
| KRH16691 | Soybean | cytosol | 59.87 | 56.63 |
| CDY21345 | Canola | cytosol | 56.69 | 55.28 |
| KRH53100 | Soybean | cytosol | 47.45 | 54.38 |
| VIT_18s0001g05080.t01 | Wine grape | nucleus | 62.1 | 54.02 |
| GSMUA_Achr10P... | Banana | cytosol, nucleus, plastid | 52.87 | 52.7 |
| KRH62380 | Soybean | cytosol | 45.86 | 52.55 |
| GSMUA_Achr3P04420_001 | Banana | cytosol | 55.73 | 52.4 |
| PGSC0003DMT400024527 | Potato | cytosol | 53.82 | 51.21 |
| CDY38240 | Canola | peroxisome | 23.57 | 51.03 |
| Solyc04g072810.2.1 | Tomato | cytosol | 51.91 | 50.0 |
| EES05517 | Sorghum | cytosol | 50.32 | 45.14 |
| Zm00001d052231_P003 | Maize | cytosol | 50.0 | 44.86 |
| KRH62383 | Soybean | cytosol | 48.09 | 44.02 |
| CDY65854 | Canola | nucleus | 40.13 | 43.6 |
| Os02t0752000-01 | Rice | cytosol | 51.91 | 43.12 |
| CDY24776 | Canola | cytosol | 40.13 | 43.0 |
| CDX73146 | Canola | cytosol | 39.49 | 42.91 |
| CDY35466 | Canola | cytosol | 39.81 | 42.66 |
| TraesCS6D01G281700.1 | Wheat | nucleus | 52.55 | 41.98 |
| CDY42697 | Canola | cytosol | 38.22 | 41.52 |
| CDX72592 | Canola | cytosol | 37.9 | 41.18 |
| HORVU6Hr1G075070.1 | Barley | nucleus | 52.55 | 40.94 |
| TraesCS6A01G302200.1 | Wheat | nucleus | 52.55 | 40.94 |
| CDX75583 | Canola | cytosol | 20.38 | 40.76 |
| TraesCS6B01G331400.1 | Wheat | nucleus | 51.91 | 40.45 |
| CDY45413 | Canola | cytosol | 39.49 | 32.21 |
| CDY33738 | Canola | cytosol | 20.7 | 26.64 |
| CDX81674 | Canola | cytosol | 20.38 | 26.23 |
| CDY15164 | Canola | cytosol | 20.7 | 25.49 |
| CDX90047 | Canola | cytosol | 20.7 | 25.49 |
| CDY38020 | Canola | cytosol | 21.02 | 25.19 |
| CDY51766 | Canola | cytosol | 19.43 | 24.9 |
| CDY45292 | Canola | cytosol | 19.43 | 24.9 |
| CDX87279 | Canola | plastid | 19.11 | 23.62 |
| CDY16746 | Canola | plastid | 19.11 | 23.62 |
| CDY33739 | Canola | cytosol | 18.47 | 22.92 |
| CDX81673 | Canola | endoplasmic reticulum, golgi | 19.11 | 19.74 |
| CDY10026 | Canola | cytosol | 22.29 | 16.83 |
| CDX81672 | Canola | cytosol | 20.38 | 16.67 |
| CDY59787 | Canola | cytosol | 21.97 | 16.59 |
| CDY10638 | Canola | nucleus | 19.75 | 16.49 |
| CDY38325 | Canola | cytosol | 18.15 | 15.36 |
| CDY64658 | Canola | cytosol | 15.61 | 14.37 |
| CDY71148 | Canola | cytosol, mitochondrion, nucleus, plastid | 12.1 | 11.95 |
| CDY10103 | Canola | extracellular | 9.24 | 10.78 |
Protein Annotations
| EnsemblPlants:CDY05023 | EnsemblPlantsGene:GSBRNA2T00119766001 | Gene3D:3.40.525.10 | InterPro:CRAL-TRIO_dom | InterPro:CRAL-TRIO_dom_sf | InterPro:CRAL/TRIO_N_dom |
| InterPro:CRAL/TRIO_N_dom_sf | InterPro:IPR001251 | InterPro:IPR036865 | PANTHER:PTHR10174 | PANTHER:PTHR10174:SF202 | PFAM:PF00650 |
| PFAM:PF03765 | PFscan:PS50191 | ProteinID:CDY05023 | ProteinID:CDY05023.1 | SEG:seg | SMART:SM00516 |
| SMART:SM01100 | SUPFAM:SSF46938 | SUPFAM:SSF52087 | UniParc:UPI0004EC8DA0 | MapMan:35.2 | : |
Description
BnaC03g28210D
Coordinates
chrLK031959:-:38225..40237
Molecular Weight (calculated)
36001.7 Da
IEP (calculated)
5.919
GRAVY (calculated)
-0.718
Length
314 amino acids
Sequence
(BLAST)
(BLAST)
001: MNPNQVSNGF VKPVPTEEEK GKIEELRKLL GPLPEKLSSF CSDDAVLRYL RARNWHVKKA AKMLKETLKW RVQYKPEEIC WEEIADEAET GKIYRSSCVD
101: KHGRPVLIMR PSVENSKSVK GQIRYLVYCM ENAIQNLPPG EEQMVWMIDF NGYSLANVSL RTTRETAHVL QEHYPERLSL AILYNPPKFF EPFWKVARPF
201: LEPKTRNKVK FVYSDDPNTK QIMEENFDMD KLESAFGGND DSGFNIEKHS ERMKEDDKKR LAALKDIASP SLDSLSFLSV SDGATSDSAH LGSEDVSEDE
301: HQPHGMSEKK ESIP
101: KHGRPVLIMR PSVENSKSVK GQIRYLVYCM ENAIQNLPPG EEQMVWMIDF NGYSLANVSL RTTRETAHVL QEHYPERLSL AILYNPPKFF EPFWKVARPF
201: LEPKTRNKVK FVYSDDPNTK QIMEENFDMD KLESAFGGND DSGFNIEKHS ERMKEDDKKR LAALKDIASP SLDSLSFLSV SDGATSDSAH LGSEDVSEDE
301: HQPHGMSEKK ESIP
001: MNTNPVTNGF VKPVPTEEEQ AKIEEVRKLL GPLPEKLSSF CSDDAVLRYL RARNWHVKKA TKMLKETLKW RVQYKPEEIC WEEVAGEAET GKIYRSSCVD
101: KLGRPVLIMR PSVENSKSVK GQIRYLVYCM ENAVQNLPPG EEQMVWMIDF HGYSLANVSL RTTKETAHVL QEHYPERLAF AVLYNPPKFF EPFWKVARPF
201: LEPKTRNKVK FVYSDDPNTK VIMEENFDME KMELAFGGND DSGFNIEKHS ERMKEDDKKR LASLEGIVSA SLDSLSILSV SDGTASNSAH PSSHDVSEDE
301: H
101: KLGRPVLIMR PSVENSKSVK GQIRYLVYCM ENAVQNLPPG EEQMVWMIDF HGYSLANVSL RTTKETAHVL QEHYPERLAF AVLYNPPKFF EPFWKVARPF
201: LEPKTRNKVK FVYSDDPNTK VIMEENFDME KMELAFGGND DSGFNIEKHS ERMKEDDKKR LASLEGIVSA SLDSLSILSV SDGTASNSAH PSSHDVSEDE
301: H
Arabidopsis Description
AT4G08690 protein [Source:UniProtKB/TrEMBL;Acc:O22270]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.