Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY38239 | Canola | cytosol | 13.3 | 76.19 |
| KRH16691 | Soybean | cytosol | 64.82 | 70.48 |
| KRH18888 | Soybean | cytosol | 64.27 | 69.67 |
| Bra012311.1-P | Field mustard | cytosol | 55.4 | 65.57 |
| CDY56380 | Canola | cytosol | 55.12 | 65.25 |
| CDY00428 | Canola | cytosol | 54.57 | 64.59 |
| GSMUA_Achr10P... | Banana | cytosol, nucleus, plastid | 55.12 | 63.17 |
| AT1G22180.4 | Thale cress | cytosol | 54.85 | 63.06 |
| Bra000655.1-P | Field mustard | cytosol | 53.74 | 62.78 |
| AT4G08690.2 | Thale cress | cytosol | 52.08 | 62.46 |
| CDX90694 | Canola | cytosol | 53.19 | 62.14 |
| CDY05023 | Canola | cytosol | 54.02 | 62.1 |
| KRH53100 | Soybean | cytosol | 45.71 | 60.22 |
| KRH62380 | Soybean | cytosol | 45.43 | 59.85 |
| CDY21345 | Canola | cytosol | 53.19 | 59.63 |
| Bra031370.1-P | Field mustard | cytosol | 53.19 | 59.63 |
| GSMUA_Achr3P04420_001 | Banana | cytosol | 54.29 | 58.68 |
| CDY12289 | Canola | cytosol | 34.07 | 58.29 |
| VIT_08s0056g00730.t01 | Wine grape | cytosol | 50.42 | 57.41 |
| PGSC0003DMT400024527 | Potato | cytosol | 51.8 | 56.67 |
| Solyc04g072810.2.1 | Tomato | cytosol | 50.14 | 55.52 |
| CDY38240 | Canola | peroxisome | 22.16 | 55.17 |
| KRH62383 | Soybean | cytosol | 51.8 | 54.52 |
| EES05517 | Sorghum | cytosol | 49.03 | 50.57 |
| Zm00001d052231_P003 | Maize | cytosol | 48.75 | 50.29 |
| Os02t0752000-01 | Rice | cytosol | 49.58 | 47.35 |
| VIT_04s0023g01720.t01 | Wine grape | cytosol, mitochondrion | 36.84 | 45.86 |
| TraesCS6D01G281700.1 | Wheat | nucleus | 49.03 | 45.04 |
| TraesCS6A01G302200.1 | Wheat | nucleus | 50.14 | 44.91 |
| HORVU6Hr1G075070.1 | Barley | nucleus | 49.31 | 44.17 |
| TraesCS6B01G331400.1 | Wheat | nucleus | 49.03 | 43.92 |
| VIT_18s0001g12420.t01 | Wine grape | cytosol | 37.67 | 43.17 |
| VIT_17s0000g00130.t01 | Wine grape | cytosol | 18.56 | 26.17 |
| VIT_01s0150g00170.t01 | Wine grape | cytosol | 17.73 | 26.02 |
| VIT_01s0011g05850.t01 | Wine grape | cytosol | 16.62 | 24.69 |
| VIT_17s0000g08850.t01 | Wine grape | mitochondrion | 17.45 | 24.23 |
| VIT_05s0020g03350.t01 | Wine grape | cytosol | 20.22 | 17.26 |
Protein Annotations
| EntrezGene:100250501 | wikigene:100250501 | Gene3D:3.40.525.10 | MapMan:35.2 | ProteinID:CBI19134 | ProteinID:CBI19134.3 |
| InterPro:CRAL-TRIO_dom | InterPro:CRAL-TRIO_dom_sf | InterPro:CRAL/TRIO_N_dom | InterPro:CRAL/TRIO_N_dom_sf | UniProt:E0CRI0 | EMBL:FN595227 |
| InterPro:IPR001251 | InterPro:IPR036865 | EntrezGene:LOC100250501 | wikigene:LOC100250501 | PFAM:PF00650 | PFAM:PF03765 |
| PFscan:PS50191 | PANTHER:PTHR10174 | PANTHER:PTHR10174:SF202 | SMART:SM00516 | SMART:SM01100 | SUPFAM:SSF46938 |
| SUPFAM:SSF52087 | TIGR:TC66714 | UniParc:UPI0001BE1492 | ArrayExpress:VIT_18s0001g05080 | EnsemblPlantsGene:VIT_18s0001g05080 | EnsemblPlants:VIT_18s0001g05080.t01 |
| RefSeq:XP_002284219 | RefSeq:XP_002284219.2 | : | : | : | : |
Description
No Description!
Coordinates
chr18:-:4148968..4155129
Molecular Weight (calculated)
40921.3 Da
IEP (calculated)
6.796
GRAVY (calculated)
-0.750
Length
361 amino acids
Sequence
(BLAST)
(BLAST)
001: MSTGLKKSPS NGYEKPSTSK EQQEKINEVR RLIGPLPDRL SIYCSDASIA RYLTARNWNV KKATKMLKET LKWRSEYKPE EIRWEDIAQE AETGKIYRAN
101: YIDKHGRTVL VMKPSCQNSK STKGQIKYLV YCMENAILNL PPNQEQMVWM IDFQGFNLSN ISVKLTRETA HVLQDRYPER LGLAILYNPP KFFEPFWTVV
201: KPFLEPKTCK KVKFVYSDDL NAKKIMEDLF DMDKLESAFG GNDTVGFNIN KYSESMREDD KKMPSFWTKD SHPSGAALQP ALANDPTLTP INLQSDSDAS
301: DKERAENPPS LTHINLQSDS DASDKERAEN SPSHGVNSGE GPLDNNVLVS DESRNGAVGI H
101: YIDKHGRTVL VMKPSCQNSK STKGQIKYLV YCMENAILNL PPNQEQMVWM IDFQGFNLSN ISVKLTRETA HVLQDRYPER LGLAILYNPP KFFEPFWTVV
201: KPFLEPKTCK KVKFVYSDDL NAKKIMEDLF DMDKLESAFG GNDTVGFNIN KYSESMREDD KKMPSFWTKD SHPSGAALQP ALANDPTLTP INLQSDSDAS
301: DKERAENPPS LTHINLQSDS DASDKERAEN SPSHGVNSGE GPLDNNVLVS DESRNGAVGI H
001: MNSDSNKSSS NGFEKSLTPE EYLNKINEVR TLLGPLTEKS SEFCSDAAIT RYLAARNGHV KKATKMLKET LKWRAQYKPE EIRWEEIARE AETGKIYRAN
101: CTDKYGRTVL VMRPSCQNTK SYKGQIRILV YCMENAILNL PDNQEQMVWL IDFHGFNMSH ISLKVSRETA HVLQEHYPER LGLAIVYNPP KIFESFYKMV
201: KPFLEPKTSN KVKFVYSDDN LSNKLLEDLF DMEQLEVAFG GKNSDAGFNF EKYAERMRED DLKFYGNTTV SSTSAHLTNS DSEVSDSEMK YLEDKEDETI
301: ENGTLQSPLD TTKT
101: CTDKYGRTVL VMRPSCQNTK SYKGQIRILV YCMENAILNL PDNQEQMVWL IDFHGFNMSH ISLKVSRETA HVLQEHYPER LGLAIVYNPP KIFESFYKMV
201: KPFLEPKTSN KVKFVYSDDN LSNKLLEDLF DMEQLEVAFG GKNSDAGFNF EKYAERMRED DLKFYGNTTV SSTSAHLTNS DSEVSDSEMK YLEDKEDETI
301: ENGTLQSPLD TTKT
Arabidopsis Description
F16L1.9 protein [Source:UniProtKB/TrEMBL;Acc:Q9LM14]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.