Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion, cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 3
- mitochondrion 3
Predictors | GFP | MS/MS | Papers |
---|---|---|---|
PPI
No PPI Data
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
PGSC0003DMT400038571 | Potato | cytosol | 70.34 | 76.12 |
Solyc02g085300.2.1 | Tomato | cytosol | 56.55 | 75.93 |
KRH69927 | Soybean | cytosol | 76.21 | 74.66 |
KRH08288 | Soybean | cytosol | 75.86 | 74.32 |
Bra011696.1-P | Field mustard | nucleus | 71.03 | 71.03 |
CDY65854 | Canola | nucleus | 70.0 | 70.24 |
Bra010566.1-P | Field mustard | cytosol | 70.0 | 69.28 |
CDY24776 | Canola | cytosol | 70.0 | 69.28 |
CDY35466 | Canola | cytosol | 69.31 | 68.6 |
CDX72592 | Canola | cytosol | 67.93 | 68.17 |
CDY42697 | Canola | cytosol | 67.59 | 67.82 |
Bra017768.1-P | Field mustard | cytosol | 67.24 | 67.47 |
GSMUA_AchrUn_... | Banana | cytosol | 65.52 | 66.67 |
AT4G36640.3 | Thale cress | cytosol | 66.55 | 65.65 |
VIT_18s0001g12420.t01 | Wine grape | cytosol | 69.66 | 64.13 |
GSMUA_Achr4P03190_001 | Banana | cytosol | 60.69 | 62.86 |
CDX75583 | Canola | cytosol | 33.45 | 61.78 |
GSMUA_Achr8P26360_001 | Banana | cytosol | 63.1 | 61.62 |
HORVU4Hr1G074380.1 | Barley | cytosol | 27.93 | 58.27 |
KXG37682 | Sorghum | cytosol | 57.93 | 57.34 |
Os03t0724100-01 | Rice | cytosol | 58.97 | 57.19 |
HORVU4Hr1G009210.2 | Barley | cytosol | 57.24 | 56.85 |
TraesCS4D01G055200.1 | Wheat | cytosol | 57.24 | 56.85 |
TraesCS4A01G259700.1 | Wheat | cytosol | 57.24 | 56.85 |
EER93541 | Sorghum | cytosol | 57.59 | 56.23 |
TraesCS4B01G055000.1 | Wheat | cytosol | 56.55 | 56.16 |
TraesCS4D01G055400.1 | Wheat | cytosol | 54.48 | 54.11 |
TraesCS4D01G055300.1 | Wheat | cytosol | 54.48 | 54.11 |
TraesCS4A01G259600.1 | Wheat | cytosol | 54.48 | 54.11 |
TraesCS4B01G055100.1 | Wheat | cytosol | 52.76 | 54.06 |
Zm00001d033836_P001 | Maize | nucleus | 54.83 | 53.9 |
HORVU4Hr1G005090.2 | Barley | cytosol | 24.14 | 53.85 |
TraesCS4B01G055200.1 | Wheat | cytosol | 54.14 | 53.77 |
TraesCS4D01G055100.1 | Wheat | cytosol | 38.62 | 53.59 |
TraesCS4A01G259500.1 | Wheat | cytosol | 53.79 | 53.42 |
HORVU5Hr1G114590.3 | Barley | mitochondrion | 22.41 | 53.28 |
HORVU6Hr1G021650.1 | Barley | cytosol, mitochondrion, nucleus | 25.52 | 53.24 |
HORVU4Hr1G009310.1 | Barley | cytosol | 53.45 | 53.08 |
HORVU4Hr1G009190.1 | Barley | cytosol | 52.41 | 52.05 |
KXG37681 | Sorghum | cytosol | 54.83 | 51.46 |
TraesCS7B01G089700.1 | Wheat | cytosol | 50.0 | 51.24 |
HORVU3Hr1G080050.1 | Barley | cytosol, mitochondrion, plastid | 25.86 | 48.08 |
HORVU5Hr1G020290.3 | Barley | plastid | 24.83 | 47.06 |
Zm00001d033837_P001 | Maize | plastid | 45.86 | 44.63 |
VIT_08s0056g00730.t01 | Wine grape | cytosol | 42.76 | 39.12 |
VIT_18s0001g05080.t01 | Wine grape | nucleus | 45.86 | 36.84 |
VIT_01s0150g00170.t01 | Wine grape | cytosol | 24.48 | 28.86 |
VIT_17s0000g00130.t01 | Wine grape | cytosol | 22.76 | 25.78 |
VIT_01s0011g05850.t01 | Wine grape | cytosol | 21.38 | 25.51 |
VIT_17s0000g08850.t01 | Wine grape | mitochondrion | 21.72 | 24.23 |
VIT_05s0020g03350.t01 | Wine grape | cytosol | 21.38 | 14.66 |
Protein Annotations
EntrezGene:100244435 | wikigene:100244435 | Gene3D:3.40.525.10 | MapMan:35.2 | ProteinID:CBI17522 | ProteinID:CBI17522.3 |
InterPro:CRAL-TRIO_dom | InterPro:CRAL-TRIO_dom_sf | InterPro:CRAL/TRIO_N_dom | InterPro:CRAL/TRIO_N_dom_sf | UniProt:D7SPE3 | EMBL:FN594959 |
InterPro:IPR001251 | InterPro:IPR036865 | EntrezGene:LOC100244435 | wikigene:LOC100244435 | PFAM:PF00650 | PFAM:PF03765 |
PFscan:PS50191 | PANTHER:PTHR10174 | PANTHER:PTHR10174:SF206 | SMART:SM00516 | SMART:SM01100 | SUPFAM:SSF46938 |
SUPFAM:SSF52087 | UniParc:UPI00015CAEC8 | ArrayExpress:VIT_04s0023g01720 | EnsemblPlantsGene:VIT_04s0023g01720 | EnsemblPlants:VIT_04s0023g01720.t01 | unigene:Vvi.20483 |
RefSeq:XP_002266907 | RefSeq:XP_002266907.2 | RefSeq:XP_010649154.1 | : | : | : |
Description
No Description!
Coordinates
chr4:+:18296632..18300829
Molecular Weight (calculated)
33586.2 Da
IEP (calculated)
8.570
GRAVY (calculated)
-0.560
Length
290 amino acids
Sequence
(BLAST)
(BLAST)
001: MFRRRQSHNH EENDSLQRGA KVSELRAALG PLSGRSLQYC TDACLVRYLE ARNWNVDKAK KMLEETLKWR ATYKPEEIRW HEVAHEGETG KVSRADFHDR
101: LGRTVLIMRP GMQNTTSAEN NIRHLVYLIE NSILNLREGQ EQMSWLIDFT GWSLNTNVPI KTARDIINIL QNHYPERLAI CILYNPPRIF VAFWKVVKYF
201: LDPKTFQKVK FVYPKNKESL EVMKSLFDVE NLPGEFGGKA TLKYDHEEFS RMMAEDDVKT ASYWGLDSKP CHVTNGYSGA ETMPLAPPAS
101: LGRTVLIMRP GMQNTTSAEN NIRHLVYLIE NSILNLREGQ EQMSWLIDFT GWSLNTNVPI KTARDIINIL QNHYPERLAI CILYNPPRIF VAFWKVVKYF
201: LDPKTFQKVK FVYPKNKESL EVMKSLFDVE NLPGEFGGKA TLKYDHEEFS RMMAEDDVKT ASYWGLDSKP CHVTNGYSGA ETMPLAPPAS
001: MFRWKNSSQT EQEQKEAALR EAKMKELKTL IGQLSGRNSL YCSDACLKRY LEARNWNVGK AKKMLEETLK WRSSFKPEEI RWNEVSGEGE TGKVYKAGFH
101: DRHGRTVLIL RPGLQNTKSL ENQMKHLVYL IENAILNLPE DQEQMSWLID FTGWSMSTSV PIKSARETIN ILQNHYPERL AVAFLYNPPR LFEAFWKIVK
201: YFIDAKTFVK VKFVYPKNSE SVELMSTFFD EENLPTEFGG KALLQYNYEE FSKQMNQDDV KTANFWGLGH SNNNQLHASN GFSGAEIAPE PIQNHP
101: DRHGRTVLIL RPGLQNTKSL ENQMKHLVYL IENAILNLPE DQEQMSWLID FTGWSMSTSV PIKSARETIN ILQNHYPERL AVAFLYNPPR LFEAFWKIVK
201: YFIDAKTFVK VKFVYPKNSE SVELMSTFFD EENLPTEFGG KALLQYNYEE FSKQMNQDDV KTANFWGLGH SNNNQLHASN GFSGAEIAPE PIQNHP
Arabidopsis Description
Sec14p-like phosphatidylinositol transfer family protein [Source:UniProtKB/TrEMBL;Acc:Q9FRK8]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.