Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 3
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| HORVU6Hr1G021650.1 | Barley | cytosol, mitochondrion, nucleus | 84.97 | 93.53 |
| HORVU5Hr1G114590.3 | Barley | mitochondrion | 74.51 | 93.44 |
| HORVU3Hr1G080050.1 | Barley | cytosol, mitochondrion, plastid | 94.12 | 92.31 |
| HORVU4Hr1G005090.2 | Barley | cytosol | 69.93 | 82.31 |
| HORVU4Hr1G074380.1 | Barley | cytosol | 72.55 | 79.86 |
| TraesCS4B01G055000.1 | Wheat | cytosol | 72.55 | 38.01 |
| HORVU4Hr1G009210.2 | Barley | cytosol | 72.55 | 38.01 |
| TraesCS4A01G259700.1 | Wheat | cytosol | 71.24 | 37.33 |
| KRH51858 | Soybean | nucleus, plastid | 46.41 | 34.98 |
| HORVU4Hr1G009310.1 | Barley | cytosol | 65.36 | 34.25 |
| HORVU4Hr1G009190.1 | Barley | cytosol | 65.36 | 34.25 |
| Zm00001d033837_P001 | Maize | plastid | 66.01 | 33.89 |
| CDX75583 | Canola | cytosol | 34.64 | 33.76 |
| EER93541 | Sorghum | cytosol | 62.75 | 32.32 |
| KXG37682 | Sorghum | cytosol | 61.44 | 32.08 |
| Os03t0724100-01 | Rice | cytosol | 62.09 | 31.77 |
| Zm00001d033836_P001 | Maize | nucleus | 56.86 | 29.49 |
| GSMUA_Achr4P03190_001 | Banana | cytosol | 50.98 | 27.86 |
| KXG37681 | Sorghum | cytosol | 56.21 | 27.83 |
| PGSC0003DMT400038571 | Potato | cytosol | 46.41 | 26.49 |
| KRH61179 | Soybean | cytosol | 30.72 | 25.97 |
| TraesCS4D01G055100.1 | Wheat | cytosol | 35.29 | 25.84 |
| GSMUA_AchrUn_... | Banana | cytosol | 47.71 | 25.61 |
| KRH15219 | Soybean | cytosol | 47.06 | 25.17 |
| VIT_04s0023g01720.t01 | Wine grape | cytosol, mitochondrion | 47.06 | 24.83 |
| GSMUA_Achr8P26360_001 | Banana | cytosol | 47.71 | 24.58 |
| KRH08288 | Soybean | cytosol | 47.06 | 24.32 |
| KRH05807 | Soybean | cytosol | 46.41 | 24.23 |
| KRH69927 | Soybean | cytosol | 46.41 | 23.99 |
| CDX73146 | Canola | cytosol | 43.79 | 23.18 |
| Solyc04g080290.2.1 | Tomato | cytosol | 43.14 | 23.0 |
| PGSC0003DMT400013200 | Potato | cytosol | 43.14 | 23.0 |
| AT1G75170.1 | Thale cress | cytosol | 44.44 | 22.97 |
| VIT_18s0001g12420.t01 | Wine grape | cytosol | 46.41 | 22.54 |
| CDY24776 | Canola | cytosol | 42.48 | 22.18 |
| CDY35466 | Canola | cytosol | 42.48 | 22.18 |
| Bra010566.1-P | Field mustard | cytosol | 42.48 | 22.18 |
| Bra011696.1-P | Field mustard | nucleus | 41.83 | 22.07 |
| CDY65854 | Canola | nucleus | 41.18 | 21.8 |
| Solyc02g085300.2.1 | Tomato | cytosol | 30.72 | 21.76 |
| AT4G36640.3 | Thale cress | cytosol | 39.87 | 20.75 |
| CDY42697 | Canola | cytosol | 38.56 | 20.42 |
| CDX72592 | Canola | cytosol | 38.56 | 20.42 |
| Bra017768.1-P | Field mustard | cytosol | 37.91 | 20.07 |
| Solyc12g089130.1.1 | Tomato | cytosol | 28.76 | 18.88 |
| Bra015863.1-P | Field mustard | cytosol | 45.1 | 17.97 |
| CDY45413 | Canola | cytosol | 45.1 | 17.92 |
| HORVU3Hr1G037050.3 | Barley | nucleus | 37.25 | 17.54 |
| HORVU6Hr1G075070.1 | Barley | nucleus | 39.22 | 14.89 |
| HORVU7Hr1G021120.1 | Barley | cytosol | 24.84 | 13.48 |
| HORVU5Hr1G122080.1 | Barley | cytosol | 19.61 | 12.15 |
| HORVU5Hr1G121940.5 | Barley | cytosol | 19.61 | 12.05 |
| HORVU0Hr1G022240.10 | Barley | mitochondrion | 18.3 | 10.69 |
| HORVU3Hr1G096280.6 | Barley | plastid | 20.26 | 10.06 |
| HORVU3Hr1G096290.4 | Barley | plastid | 20.26 | 8.81 |
| HORVU5Hr1G121860.2 | Barley | plastid | 18.95 | 8.58 |
| HORVU4Hr1G067410.4 | Barley | plastid | 20.91 | 6.41 |
Protein Annotations
| EnsemblPlants:HORVU5Hr1G020290.3 | EnsemblPlantsGene:HORVU5Hr1G020290 | Gene3D:3.40.525.10 | InterPro:CRAL-TRIO_dom | InterPro:CRAL-TRIO_dom_sf | InterPro:CRAL/TRIO_N_dom |
| InterPro:CRAL/TRIO_N_dom_sf | InterPro:IPR001251 | InterPro:IPR036865 | PANTHER:PTHR10174 | PANTHER:PTHR10174:SF206 | PFAM:PF00650 |
| SMART:SM01100 | SUPFAM:SSF46938 | SUPFAM:SSF52087 | UniParc:UPI000B4672C4 | UniProt:A0A287QKG8 | MapMan:35.2 |
Description
No Description!
Coordinates
chrchr5H:-:92538301..92539473
Molecular Weight (calculated)
17525.2 Da
IEP (calculated)
9.922
GRAVY (calculated)
-0.478
Length
153 amino acids
Sequence
(BLAST)
(BLAST)
001: MSSFMNSLDV SSSVVPRKLK NIDAYYFLSK RKPPLINELR ATLAPMSARG EKYCSKACLA MYLEARNWNV DKSRKMLEES LKWRAVSRPE DIRWPDVSVE
101: AETGKMYRAT FADREGRAVV IMRPAKQNTS SHEGQLRYLI YTLENAVLSL PEG
101: AETGKMYRAT FADREGRAVV IMRPAKQNTS SHEGQLRYLI YTLENAVLSL PEG
001: MFRWKNSSQT EQEQKEAALR EAKMKELKTL IGQLSGRNSL YCSDACLKRY LEARNWNVGK AKKMLEETLK WRSSFKPEEI RWNEVSGEGE TGKVYKAGFH
101: DRHGRTVLIL RPGLQNTKSL ENQMKHLVYL IENAILNLPE DQEQMSWLID FTGWSMSTSV PIKSARETIN ILQNHYPERL AVAFLYNPPR LFEAFWKIVK
201: YFIDAKTFVK VKFVYPKNSE SVELMSTFFD EENLPTEFGG KALLQYNYEE FSKQMNQDDV KTANFWGLGH SNNNQLHASN GFSGAEIAPE PIQNHP
101: DRHGRTVLIL RPGLQNTKSL ENQMKHLVYL IENAILNLPE DQEQMSWLID FTGWSMSTSV PIKSARETIN ILQNHYPERL AVAFLYNPPR LFEAFWKIVK
201: YFIDAKTFVK VKFVYPKNSE SVELMSTFFD EENLPTEFGG KALLQYNYEE FSKQMNQDDV KTANFWGLGH SNNNQLHASN GFSGAEIAPE PIQNHP
Arabidopsis Description
Sec14p-like phosphatidylinositol transfer family protein [Source:UniProtKB/TrEMBL;Acc:Q9FRK8]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.