Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra011696.1-P | Field mustard | nucleus | 97.58 | 97.24 |
| CDY24776 | Canola | cytosol | 86.51 | 85.32 |
| CDX72592 | Canola | cytosol | 84.78 | 84.78 |
| CDX75583 | Canola | cytosol | 46.02 | 84.71 |
| CDY35466 | Canola | cytosol | 85.47 | 84.3 |
| CDY42697 | Canola | cytosol | 83.74 | 83.74 |
| AT4G36640.3 | Thale cress | cytosol | 82.01 | 80.61 |
| VIT_04s0023g01720.t01 | Wine grape | cytosol, mitochondrion | 70.24 | 70.0 |
| Solyc02g085300.2.1 | Tomato | cytosol | 50.52 | 67.59 |
| PGSC0003DMT400038571 | Potato | cytosol | 62.28 | 67.16 |
| KRH08288 | Soybean | cytosol | 67.47 | 65.88 |
| KRH69927 | Soybean | cytosol | 67.13 | 65.54 |
| GSMUA_AchrUn_... | Banana | cytosol | 58.48 | 59.3 |
| CDX73146 | Canola | cytosol | 57.09 | 57.09 |
| GSMUA_Achr4P03190_001 | Banana | cytosol | 54.67 | 56.43 |
| GSMUA_Achr8P26360_001 | Banana | cytosol | 56.06 | 54.55 |
| CDY38239 | Canola | cytosol | 11.76 | 53.97 |
| KXG37682 | Sorghum | cytosol | 52.6 | 51.88 |
| Zm00001d033836_P001 | Maize | nucleus | 52.25 | 51.19 |
| EER93541 | Sorghum | cytosol | 52.25 | 50.84 |
| HORVU4Hr1G074380.1 | Barley | cytosol | 23.88 | 49.64 |
| HORVU4Hr1G009210.2 | Barley | cytosol | 49.83 | 49.32 |
| KXG37681 | Sorghum | cytosol | 52.6 | 49.19 |
| TraesCS4A01G259700.1 | Wheat | cytosol | 49.48 | 48.97 |
| TraesCS4D01G055200.1 | Wheat | cytosol | 49.48 | 48.97 |
| Os03t0724100-01 | Rice | cytosol | 50.17 | 48.49 |
| HORVU4Hr1G005090.2 | Barley | cytosol | 21.8 | 48.46 |
| TraesCS4D01G055100.1 | Wheat | cytosol | 34.95 | 48.33 |
| TraesCS4A01G259600.1 | Wheat | cytosol | 48.44 | 47.95 |
| TraesCS4B01G055000.1 | Wheat | cytosol | 48.1 | 47.6 |
| TraesCS4D01G055300.1 | Wheat | cytosol | 48.1 | 47.6 |
| TraesCS4D01G055400.1 | Wheat | cytosol | 47.75 | 47.26 |
| TraesCS4A01G259500.1 | Wheat | cytosol | 47.4 | 46.92 |
| HORVU4Hr1G009310.1 | Barley | cytosol | 47.4 | 46.92 |
| TraesCS4B01G055200.1 | Wheat | cytosol | 47.4 | 46.92 |
| TraesCS4B01G055100.1 | Wheat | cytosol | 45.67 | 46.64 |
| HORVU4Hr1G009190.1 | Barley | cytosol | 47.06 | 46.58 |
| HORVU6Hr1G021650.1 | Barley | cytosol, mitochondrion, nucleus | 22.15 | 46.04 |
| TraesCS7B01G089700.1 | Wheat | cytosol | 44.29 | 45.23 |
| HORVU5Hr1G114590.3 | Barley | mitochondrion | 18.69 | 44.26 |
| CDY45413 | Canola | cytosol | 57.79 | 43.38 |
| HORVU3Hr1G080050.1 | Barley | cytosol, mitochondrion, plastid | 23.18 | 42.95 |
| CDY56380 | Canola | cytosol | 43.94 | 41.64 |
| CDY00428 | Canola | cytosol | 43.6 | 41.31 |
| HORVU5Hr1G020290.3 | Barley | plastid | 21.8 | 41.18 |
| CDX90694 | Canola | cytosol | 43.94 | 41.1 |
| Zm00001d033837_P001 | Maize | plastid | 41.87 | 40.6 |
| CDY05023 | Canola | cytosol | 43.6 | 40.13 |
| CDY21345 | Canola | cytosol | 43.25 | 38.82 |
| CDY12289 | Canola | cytosol | 25.95 | 35.55 |
| CDY38240 | Canola | peroxisome | 15.57 | 31.03 |
| CDX90047 | Canola | cytosol | 22.15 | 25.1 |
| CDY38020 | Canola | cytosol | 22.15 | 24.43 |
| CDY15164 | Canola | cytosol | 21.45 | 24.31 |
| CDY33738 | Canola | cytosol | 20.42 | 24.18 |
| CDX81674 | Canola | cytosol | 19.72 | 23.36 |
| CDY16746 | Canola | plastid | 19.72 | 22.44 |
| CDX87279 | Canola | plastid | 19.72 | 22.44 |
| CDY45292 | Canola | cytosol | 18.69 | 22.04 |
| CDY51766 | Canola | cytosol | 18.34 | 21.63 |
| CDY33739 | Canola | cytosol | 17.99 | 20.55 |
| CDX81673 | Canola | endoplasmic reticulum, golgi | 18.34 | 17.43 |
| CDY10026 | Canola | cytosol | 20.76 | 14.42 |
| CDY59787 | Canola | cytosol | 20.42 | 14.18 |
| CDX81672 | Canola | cytosol | 18.34 | 13.8 |
| CDY10638 | Canola | nucleus | 16.95 | 13.03 |
| CDY64658 | Canola | cytosol | 14.19 | 12.02 |
| CDY38325 | Canola | cytosol | 14.88 | 11.59 |
| CDY71148 | Canola | cytosol, mitochondrion, nucleus, plastid | 10.38 | 9.43 |
| CDY10103 | Canola | extracellular | 7.96 | 8.55 |
Protein Annotations
| EnsemblPlants:CDY65854 | EnsemblPlantsGene:GSBRNA2T00050901001 | Gene3D:3.40.525.10 | InterPro:CRAL-TRIO_dom | InterPro:CRAL-TRIO_dom_sf | InterPro:CRAL/TRIO_N_dom |
| InterPro:CRAL/TRIO_N_dom_sf | InterPro:IPR001251 | InterPro:IPR036865 | PANTHER:PTHR10174 | PANTHER:PTHR10174:SF206 | PFAM:PF00650 |
| PFAM:PF03765 | PFscan:PS50191 | ProteinID:CDY65854 | ProteinID:CDY65854.1 | SMART:SM00516 | SMART:SM01100 |
| SUPFAM:SSF46938 | SUPFAM:SSF52087 | UniParc:UPI0004EE12A2 | UniProt:A0A078JGN8 | MapMan:35.2 | : |
Description
BnaC01g40700DBnaC01g40700D protein [Source:UniProtKB/TrEMBL;Acc:A0A078JGN8]
Coordinates
chrLK034978:+:14373..16343
Molecular Weight (calculated)
33454.8 Da
IEP (calculated)
9.269
GRAVY (calculated)
-0.654
Length
289 amino acids
Sequence
(BLAST)
(BLAST)
001: MSNMFKRKNA HQLDDDSQQD NKVSKLRSAL GPLSGHSLVF CSDASLRRYL DARNWNVEKA KKMIEETLKW RSTYKPHEIL WHQVAHEGET GKVSRASFHD
101: RQGRVVLIMR PTMQNSTSAE GNIRHLVYLL ENAILNLPRG QEQMSWLIDF TGWSMAANVP MKTTRDIVYI LQNHYPERLG MAFLYNPPRL FQAGYKAIKY
201: FLDPRTAQKV KFVYPKDKTS YELMKSHFDV ENLPKEFGGK ATLAYDHEEF SRQMYEDDVK KAKYWGLEDT EPNGFHAADV VSEPATSLA
101: RQGRVVLIMR PTMQNSTSAE GNIRHLVYLL ENAILNLPRG QEQMSWLIDF TGWSMAANVP MKTTRDIVYI LQNHYPERLG MAFLYNPPRL FQAGYKAIKY
201: FLDPRTAQKV KFVYPKDKTS YELMKSHFDV ENLPKEFGGK ATLAYDHEEF SRQMYEDDVK KAKYWGLEDT EPNGFHAADV VSEPATSLA
001: MFRRRNAHQL DNDDSQQDNK VRELKSAIGP LSGHSLVFCS DASLRRFLDA RNWDVEKAKK MIQETLKWRS TYKPQEIRWN QVAHEGETGK ASRASFHDRQ
101: GRVVLIMRPA MQNSTSQEGN IRHLVYLLEN AIINLPKGQK QMSWLIDFTG WSMAVNPPMK TTREIIHILQ NYYPERLGIA FLYNPPRLFQ AVYRAAKYFL
201: DPRTAEKVKF VYPKDKASDE LMTTHFDVEN LPKEFGGEAT LEYDHEDFSR QMYEDDLKTA KYWGLEGKHY PKTNGFSPSD VVPEPAIEIA SAAS
101: GRVVLIMRPA MQNSTSQEGN IRHLVYLLEN AIINLPKGQK QMSWLIDFTG WSMAVNPPMK TTREIIHILQ NYYPERLGIA FLYNPPRLFQ AVYRAAKYFL
201: DPRTAEKVKF VYPKDKASDE LMTTHFDVEN LPKEFGGEAT LEYDHEDFSR QMYEDDLKTA KYWGLEGKHY PKTNGFSPSD VVPEPAIEIA SAAS
Arabidopsis Description
At4g36640 [Source:UniProtKB/TrEMBL;Acc:O23217]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.