Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra026802.1-P | Field mustard | cytosol | 81.15 | 95.65 |
| CDY33738 | Canola | cytosol | 95.08 | 95.08 |
| CDY33739 | Canola | cytosol | 77.05 | 74.31 |
| CDY45292 | Canola | cytosol | 74.59 | 74.29 |
| CDY51766 | Canola | cytosol | 74.59 | 74.29 |
| Solyc01g005260.2.1 | Tomato | cytosol | 63.11 | 64.17 |
| CDX81673 | Canola | endoplasmic reticulum, golgi | 79.1 | 63.49 |
| Solyc01g005270.2.1 | Tomato | cytosol | 62.3 | 63.33 |
| PGSC0003DMT400058687 | Potato | cytosol | 61.07 | 62.08 |
| VIT_01s0011g05850.t01 | Wine grape | cytosol | 61.07 | 61.32 |
| Solyc01g005280.2.1 | Tomato | cytosol | 59.84 | 60.83 |
| KRH70361 | Soybean | cytosol | 61.48 | 60.73 |
| Solyc01g005290.2.1 | Tomato | cytosol | 49.18 | 60.61 |
| PGSC0003DMT400058639 | Potato | cytosol | 50.41 | 60.59 |
| PGSC0003DMT400058682 | Potato | cytosol | 61.07 | 52.65 |
| PGSC0003DMT400058685 | Potato | cytosol | 43.03 | 52.24 |
| CDX81672 | Canola | cytosol | 77.87 | 49.48 |
| CDX90047 | Canola | cytosol | 37.3 | 35.69 |
| CDY15164 | Canola | cytosol | 37.3 | 35.69 |
| CDY38020 | Canola | cytosol | 35.25 | 32.82 |
| CDY38239 | Canola | cytosol | 7.79 | 30.16 |
| CDX73146 | Canola | cytosol | 25.0 | 21.11 |
| CDY24776 | Canola | cytosol | 24.59 | 20.48 |
| CDY05023 | Canola | cytosol | 26.23 | 20.38 |
| CDY00428 | Canola | cytosol | 25.41 | 20.33 |
| CDY35466 | Canola | cytosol | 24.18 | 20.14 |
| CDY42697 | Canola | cytosol | 23.77 | 20.07 |
| CDX90694 | Canola | cytosol | 25.0 | 19.74 |
| CDX72592 | Canola | cytosol | 23.36 | 19.72 |
| CDY65854 | Canola | nucleus | 23.36 | 19.72 |
| CDY56380 | Canola | cytosol | 24.18 | 19.34 |
| CDY21345 | Canola | cytosol | 24.18 | 18.32 |
| CDX75583 | Canola | cytosol | 11.48 | 17.83 |
| CDY16746 | Canola | plastid | 17.62 | 16.93 |
| CDX87279 | Canola | plastid | 17.62 | 16.93 |
| CDY45413 | Canola | cytosol | 25.0 | 15.84 |
| CDY12289 | Canola | cytosol | 13.52 | 15.64 |
| CDY38240 | Canola | peroxisome | 8.61 | 14.48 |
| CDY10026 | Canola | cytosol | 21.31 | 12.5 |
| CDY59787 | Canola | cytosol | 20.9 | 12.26 |
| CDY10638 | Canola | nucleus | 18.03 | 11.7 |
| CDY38325 | Canola | cytosol | 15.57 | 10.24 |
| CDY64658 | Canola | cytosol | 13.52 | 9.68 |
| CDY71148 | Canola | cytosol, mitochondrion, nucleus, plastid | 10.25 | 7.86 |
| CDY10103 | Canola | extracellular | 8.2 | 7.43 |
Protein Annotations
| EnsemblPlants:CDX81674 | EnsemblPlantsGene:GSBRNA2T00136594001 | Gene3D:1.10.8.20 | Gene3D:3.40.525.10 | InterPro:CRAL-TRIO_dom | InterPro:CRAL-TRIO_dom_sf |
| InterPro:CRAL/TRIO_N_dom_sf | InterPro:IPR001251 | InterPro:IPR036865 | PANTHER:PTHR10174 | PANTHER:PTHR10174:SF121 | PFAM:PF00650 |
| PFscan:PS50191 | ProteinID:CDX81674 | ProteinID:CDX81674.1 | SMART:SM00516 | SUPFAM:SSF46938 | SUPFAM:SSF52087 |
| UniParc:UPI0004EEF224 | MapMan:35.2 | : | : | : | : |
Description
BnaC08g39270D
Coordinates
chrLK031826:-:301355..302675
Molecular Weight (calculated)
27671.7 Da
IEP (calculated)
8.300
GRAVY (calculated)
-0.249
Length
244 amino acids
Sequence
(BLAST)
(BLAST)
001: MEESQELALT QLRKSVEKLS SSTEGYEKPT LMRFLIARSM NPNKAAKMFV DWQKWRASMI PPSGFIPDSE VKDELETRKM FLQGPTKSGQ PLVVCKVSKH
101: LTSKDQLPFK KFLVHVLDKS IASAIQGKEV GDEKVACLID LQNITYKNLD ARGTITGFQI LQAYYPERLS KCYILHMPGI FVTLWRFVCR FLDKATKEKI
201: VIVTDAEEQQ RLEEEVGLDA LPEEYGGRAK LTAFQDVLLP LAAP
101: LTSKDQLPFK KFLVHVLDKS IASAIQGKEV GDEKVACLID LQNITYKNLD ARGTITGFQI LQAYYPERLS KCYILHMPGI FVTLWRFVCR FLDKATKEKI
201: VIVTDAEEQQ RLEEEVGLDA LPEEYGGRAK LTAFQDVLLP LAAP
001: MEESQELALT QLRKSVEKLS SSTEGYDKPT LMRFLVARSM DPVKAAKMFV DWQKWRASMV PPTGFIPESE VQDELEFRKV CLQGPTKSGH PLVLVITSKH
101: FASKDPANFK KFVVYALDKT IASGNNGKEV GGEKLVAVID LANITYKNLD ARGLITGFQF LQSYYPERLA KCYILHMPGF FVTVWKFVCR FLEKATQEKI
201: VIVTDGEEQR KFEEEIGADA LPEEYGGRAK LTAIQDVLLP QAAPVTLTNN NV
101: FASKDPANFK KFVVYALDKT IASGNNGKEV GGEKLVAVID LANITYKNLD ARGLITGFQF LQSYYPERLA KCYILHMPGF FVTVWKFVCR FLEKATQEKI
201: VIVTDGEEQR KFEEEIGADA LPEEYGGRAK LTAIQDVLLP QAAPVTLTNN NV
Arabidopsis Description
AT1G14820 protein [Source:UniProtKB/TrEMBL;Acc:B9DGS8]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.