Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- plastid 1
- cytosol 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc01g005280.2.1 | Tomato | cytosol | 82.83 | 68.33 |
| Solyc01g005270.2.1 | Tomato | cytosol | 81.82 | 67.5 |
| Solyc01g005260.2.1 | Tomato | cytosol | 81.31 | 67.08 |
| VIT_01s0011g05850.t01 | Wine grape | cytosol | 67.17 | 54.73 |
| KRH70361 | Soybean | cytosol | 65.66 | 52.63 |
| CDY33738 | Canola | cytosol | 61.62 | 50.0 |
| Bra026803.1-P | Field mustard | cytosol | 63.64 | 49.61 |
| CDY33739 | Canola | cytosol | 63.13 | 49.41 |
| CDX81674 | Canola | cytosol | 60.61 | 49.18 |
| Bra026802.1-P | Field mustard | cytosol | 50.51 | 48.31 |
| Bra026185.1-P | Field mustard | cytosol | 59.09 | 47.76 |
| CDY45292 | Canola | cytosol | 59.09 | 47.76 |
| CDY51766 | Canola | cytosol | 59.09 | 47.76 |
| AT1G14820.3 | Thale cress | cytosol | 60.61 | 47.62 |
| CDX81673 | Canola | endoplasmic reticulum, golgi | 62.63 | 40.79 |
| CDX81672 | Canola | cytosol | 62.63 | 32.29 |
| Solyc03g118150.2.1 | Tomato | cytosol | 34.34 | 25.09 |
| Solyc06g068800.2.1 | Tomato | cytosol | 35.35 | 22.65 |
| Solyc04g080290.2.1 | Tomato | cytosol | 27.78 | 19.16 |
| Solyc03g112640.2.1 | Tomato | plastid | 22.73 | 17.18 |
| Solyc02g085300.2.1 | Tomato | cytosol | 18.69 | 17.13 |
| Solyc04g072810.2.1 | Tomato | cytosol | 27.27 | 16.56 |
| Solyc09g098600.2.1 | Tomato | cytosol | 24.75 | 16.07 |
| Solyc12g089130.1.1 | Tomato | cytosol | 18.69 | 15.88 |
| Solyc09g075970.2.1 | Tomato | cytosol | 21.21 | 9.93 |
Protein Annotations
| EnsemblPlants:Solyc01g005290.2.1 | EnsemblPlantsGene:Solyc01g005290.2 | Gene3D:1.10.8.20 | Gene3D:3.40.525.10 | InterPro:CRAL-TRIO_dom | InterPro:CRAL-TRIO_dom_sf |
| InterPro:CRAL/TRIO_N_dom | InterPro:CRAL/TRIO_N_dom_sf | InterPro:IPR001251 | InterPro:IPR036865 | PANTHER:PTHR10174 | PANTHER:PTHR10174:SF121 |
| PFAM:PF00650 | PFscan:PS50191 | SMART:SM01100 | SUPFAM:SSF46938 | SUPFAM:SSF52087 | UniParc:UPI0002761ABF |
| UniProt:K4AS96 | MapMan:35.2 | : | : | : | : |
Description
No Description!
Coordinates
chr1:-:209035..211552
Molecular Weight (calculated)
22876.0 Da
IEP (calculated)
9.828
GRAVY (calculated)
-0.162
Length
198 amino acids
Sequence
(BLAST)
(BLAST)
001: MDTNQEIALI QMRKSIEKLG SSIESYGDKT LMRFLIARSM NPEKAAKMFC QWKKWRAEMV PLGYITDSEV ADEAVAEKVY LQGLSKNGYP VSIIKLSKHF
101: PSKYQVQLKK YVVHLLDKTI ASSFNGREIG DEKLIGILDL QNITYSNVDV RGMITGFQFL QAYYPERLAT CYLLHMPQFF VTIWRFVVAS LTKQLNRR
101: PSKYQVQLKK YVVHLLDKTI ASSFNGREIG DEKLIGILDL QNITYSNVDV RGMITGFQFL QAYYPERLAT CYLLHMPQFF VTIWRFVVAS LTKQLNRR
001: MEESQELALT QLRKSVEKLS SSTEGYDKPT LMRFLVARSM DPVKAAKMFV DWQKWRASMV PPTGFIPESE VQDELEFRKV CLQGPTKSGH PLVLVITSKH
101: FASKDPANFK KFVVYALDKT IASGNNGKEV GGEKLVAVID LANITYKNLD ARGLITGFQF LQSYYPERLA KCYILHMPGF FVTVWKFVCR FLEKATQEKI
201: VIVTDGEEQR KFEEEIGADA LPEEYGGRAK LTAIQDVLLP QAAPVTLTNN NV
101: FASKDPANFK KFVVYALDKT IASGNNGKEV GGEKLVAVID LANITYKNLD ARGLITGFQF LQSYYPERLA KCYILHMPGF FVTVWKFVCR FLEKATQEKI
201: VIVTDGEEQR KFEEEIGADA LPEEYGGRAK LTAIQDVLLP QAAPVTLTNN NV
Arabidopsis Description
AT1G14820 protein [Source:UniProtKB/TrEMBL;Acc:B9DGS8]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.