Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum, golgi
Predictor Summary:
Predictor Summary:
- plastid 3
- extracellular 4
- endoplasmic reticulum 5
- vacuole 4
- plasma membrane 4
- golgi 5
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY33739 | Canola | cytosol | 79.93 | 96.05 |
| CDY45292 | Canola | cytosol | 69.08 | 85.71 |
| CDY51766 | Canola | cytosol | 69.08 | 85.71 |
| AT1G14820.3 | Thale cress | cytosol | 70.72 | 85.32 |
| CDY33738 | Canola | cytosol | 64.8 | 80.74 |
| CDX81674 | Canola | cytosol | 63.49 | 79.1 |
| Solyc01g005260.2.1 | Tomato | cytosol | 53.29 | 67.5 |
| Solyc01g005270.2.1 | Tomato | cytosol | 52.3 | 66.25 |
| PGSC0003DMT400058687 | Potato | cytosol | 50.99 | 64.58 |
| VIT_01s0011g05850.t01 | Wine grape | cytosol | 50.99 | 63.79 |
| PGSC0003DMT400058639 | Potato | cytosol | 42.43 | 63.55 |
| KRH70361 | Soybean | cytosol | 50.99 | 62.75 |
| Solyc01g005290.2.1 | Tomato | cytosol | 40.79 | 62.63 |
| Solyc01g005280.2.1 | Tomato | cytosol | 49.34 | 62.5 |
| CDX81672 | Canola | cytosol | 72.7 | 57.55 |
| PGSC0003DMT400058685 | Potato | cytosol | 37.17 | 56.22 |
| PGSC0003DMT400058682 | Potato | cytosol | 50.99 | 54.77 |
| CDY15164 | Canola | cytosol | 30.26 | 36.08 |
| CDX90047 | Canola | cytosol | 29.93 | 35.69 |
| CDY38020 | Canola | cytosol | 28.62 | 33.21 |
| CDY38239 | Canola | cytosol | 5.26 | 25.4 |
| CDX73146 | Canola | cytosol | 19.41 | 20.42 |
| CDY24776 | Canola | cytosol | 18.75 | 19.45 |
| CDY35466 | Canola | cytosol | 18.42 | 19.11 |
| CDY05023 | Canola | cytosol | 19.74 | 19.11 |
| CDY42697 | Canola | cytosol | 17.76 | 18.69 |
| CDX90694 | Canola | cytosol | 18.75 | 18.45 |
| CDX72592 | Canola | cytosol | 17.43 | 18.34 |
| CDY65854 | Canola | nucleus | 17.43 | 18.34 |
| CDY00428 | Canola | cytosol | 18.09 | 18.03 |
| CDY56380 | Canola | cytosol | 17.43 | 17.38 |
| CDY16746 | Canola | plastid | 14.14 | 16.93 |
| CDX87279 | Canola | plastid | 14.14 | 16.93 |
| CDY21345 | Canola | cytosol | 17.76 | 16.77 |
| CDY45413 | Canola | cytosol | 21.05 | 16.62 |
| CDX75583 | Canola | cytosol | 8.55 | 16.56 |
| CDY12289 | Canola | cytosol | 10.2 | 14.69 |
| CDY10638 | Canola | nucleus | 17.11 | 13.83 |
| CDY10026 | Canola | cytosol | 17.11 | 12.5 |
| CDY38240 | Canola | peroxisome | 5.92 | 12.41 |
| CDY59787 | Canola | cytosol | 16.78 | 12.26 |
| CDY38325 | Canola | cytosol | 12.5 | 10.24 |
| CDY64658 | Canola | cytosol | 11.18 | 9.97 |
| CDY71148 | Canola | cytosol, mitochondrion, nucleus, plastid | 9.21 | 8.81 |
| CDY10103 | Canola | extracellular | 6.25 | 7.06 |
Protein Annotations
| EnsemblPlants:CDX81673 | EnsemblPlantsGene:GSBRNA2T00136593001 | Gene3D:1.10.8.20 | Gene3D:3.40.525.10 | InterPro:CRAL-TRIO_dom | InterPro:CRAL-TRIO_dom_sf |
| InterPro:CRAL/TRIO_N_dom_sf | InterPro:IPR001251 | InterPro:IPR036865 | PANTHER:PTHR10174 | PANTHER:PTHR10174:SF121 | PFAM:PF00650 |
| PFscan:PS50191 | ProteinID:CDX81673 | ProteinID:CDX81673.1 | SEG:seg | SignalP:SignalP-noTM | SMART:SM00516 |
| SUPFAM:SSF46938 | SUPFAM:SSF52087 | UniParc:UPI0004EEAA2B | MapMan:35.2 | : | : |
Description
BnaC08g39280D
Coordinates
chrLK031826:-:298955..300902
Molecular Weight (calculated)
34516.1 Da
IEP (calculated)
8.949
GRAVY (calculated)
-0.163
Length
304 amino acids
Sequence
(BLAST)
(BLAST)
001: MGYPHSCVVM RFFIICWAVC TSTSKTLSFS HSLSSLRKPF PVLRSSEPKI MEESQEELAL TQLRKSVEKL SSSTEGYEAP TLMRFLVARS MNPHKAAKMF
101: VDWQKWRASL VPPNGITDSE VKDELDFRKV CLQGPTKSGH PMVLVITSKH YPAKDQVIFK KFVVHVLDKT IASGIKGKEV GDEKLVAVID LSNITYKNLD
201: ARGLITGFQF LQSYYPERLA KCYILHMPGF FLTVWRFVCR FLDKATKEKI VIVTEGEEER KFKEEIGLDA LPEEYGGRAK LTLIQDVLLP QTAPQMLTTN
301: NDNV
101: VDWQKWRASL VPPNGITDSE VKDELDFRKV CLQGPTKSGH PMVLVITSKH YPAKDQVIFK KFVVHVLDKT IASGIKGKEV GDEKLVAVID LSNITYKNLD
201: ARGLITGFQF LQSYYPERLA KCYILHMPGF FLTVWRFVCR FLDKATKEKI VIVTEGEEER KFKEEIGLDA LPEEYGGRAK LTLIQDVLLP QTAPQMLTTN
301: NDNV
001: MEESQELALT QLRKSVEKLS SSTEGYDKPT LMRFLVARSM DPVKAAKMFV DWQKWRASMV PPTGFIPESE VQDELEFRKV CLQGPTKSGH PLVLVITSKH
101: FASKDPANFK KFVVYALDKT IASGNNGKEV GGEKLVAVID LANITYKNLD ARGLITGFQF LQSYYPERLA KCYILHMPGF FVTVWKFVCR FLEKATQEKI
201: VIVTDGEEQR KFEEEIGADA LPEEYGGRAK LTAIQDVLLP QAAPVTLTNN NV
101: FASKDPANFK KFVVYALDKT IASGNNGKEV GGEKLVAVID LANITYKNLD ARGLITGFQF LQSYYPERLA KCYILHMPGF FVTVWKFVCR FLEKATQEKI
201: VIVTDGEEQR KFEEEIGADA LPEEYGGRAK LTAIQDVLLP QAAPVTLTNN NV
Arabidopsis Description
AT1G14820 protein [Source:UniProtKB/TrEMBL;Acc:B9DGS8]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.