Factsheet for Solyc01g005280.2.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 1
cytosol 4
nucleus 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, plastid
BaCelLo:	plastid
MultiLoc:	cytosol
Plant-mPloc:	cytosol, nucleus
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400058687	Potato	cytosol	94.58	94.58
Solyc01g005270.2.1	Tomato	cytosol	84.58	84.58
Solyc01g005260.2.1	Tomato	cytosol	84.17	84.17
Solyc01g005290.2.1	Tomato	cytosol	68.33	82.83
PGSC0003DMT400058682	Potato	cytosol	94.58	80.21
VIT_01s0011g05850.t01	Wine grape	cytosol	65.42	64.61
KRH70361	Soybean	cytosol	64.58	62.75
AT1G14820.3	Thale cress	cytosol	62.92	59.92
CDY33738	Canola	cytosol	60.83	59.84
CDX81674	Canola	cytosol	60.83	59.84
Bra026803.1-P	Field mustard	cytosol	62.92	59.45
CDY33739	Canola	cytosol	62.5	59.29
Bra026802.1-P	Field mustard	cytosol	50.0	57.97
CDY51766	Canola	cytosol	58.75	57.55
Bra026185.1-P	Field mustard	cytosol	58.75	57.55
CDY45292	Canola	cytosol	58.75	57.55
CDX81673	Canola	endoplasmic reticulum, golgi	62.5	49.34
CDX81672	Canola	cytosol	64.17	40.1
Solyc03g118150.2.1	Tomato	cytosol	34.17	30.26
Solyc06g068800.2.1	Tomato	cytosol	36.25	28.16
Solyc04g080290.2.1	Tomato	cytosol	26.67	22.3
Solyc02g085300.2.1	Tomato	cytosol	18.33	20.37
Solyc12g089130.1.1	Tomato	cytosol	18.75	19.31
Solyc04g072810.2.1	Tomato	cytosol	24.58	18.1
Solyc03g112640.2.1	Tomato	plastid	17.5	16.03
Solyc09g098600.2.1	Tomato	cytosol	19.58	15.41
Solyc09g075970.2.1	Tomato	cytosol	19.58	11.11

Protein Annotations

EnsemblPlants:Solyc01g005280.2.1	EnsemblPlantsGene:Solyc01g005280.2	Gene3D:1.10.8.20	Gene3D:3.40.525.10	InterPro:CRAL-TRIO_dom	InterPro:CRAL-TRIO_dom_sf
InterPro:CRAL/TRIO_N_dom_sf	InterPro:IPR001251	InterPro:IPR036865	PANTHER:PTHR10174	PANTHER:PTHR10174:SF121	PFAM:PF00650
PFscan:PS50191	SMART:SM00516	SUPFAM:SSF46938	SUPFAM:SSF52087	UniParc:UPI0002761ABE	UniProt:K4AS95
MapMan:35.2	:	:	:	:	:

Description

No Description!

Coordinates

chr1:-:204617..207451

Molecular Weight (calculated)

27600.5 Da

IEP (calculated)

8.420

GRAVY (calculated)

-0.227

Length

240 amino acids

Sequence
(BLAST)

001: MDRNQEIALA KMRKSVEKLG SSTESYGEKT LMRFLIARSM NPEKAAKMFC QWKKWRAEMV PLGYIPDSEV ADESAAEKVY LQGLSKNGYP VAIIKLNKHF
101: ASKDQVQFKK FVVHALDKTI ASSFNGSEIG NEKLIAILDL QNITYSNVDT RGLITGFQFL QAYYPERLAT CYILHMPQFF VTVWRFICHF IDKATQQKMR
201: IIMSEEQKQE FIREVGEDVV PTEYGGRAEL VLLQDVVVNY

Best Arabidopsis Sequence Match ( AT1G14820.3 )
(BLAST)

001: MEESQELALT QLRKSVEKLS SSTEGYDKPT LMRFLVARSM DPVKAAKMFV DWQKWRASMV PPTGFIPESE VQDELEFRKV CLQGPTKSGH PLVLVITSKH
101: FASKDPANFK KFVVYALDKT IASGNNGKEV GGEKLVAVID LANITYKNLD ARGLITGFQF LQSYYPERLA KCYILHMPGF FVTVWKFVCR FLEKATQEKI
201: VIVTDGEEQR KFEEEIGADA LPEEYGGRAK LTAIQDVLLP QAAPVTLTNN NV

Arabidopsis Description

AT1G14820 protein [Source:UniProtKB/TrEMBL;Acc:B9DGS8]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.