Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- plastid 1
- cytosol 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400018571 | Potato | cytosol | 89.18 | 83.18 |
| KRH64923 | Soybean | nucleus | 51.15 | 54.74 |
| VIT_08s0056g00730.t01 | Wine grape | cytosol | 53.77 | 51.73 |
| Solyc02g085300.2.1 | Tomato | cytosol | 31.8 | 44.91 |
| Solyc04g072810.2.1 | Tomato | cytosol | 46.89 | 43.87 |
| Solyc12g089130.1.1 | Tomato | cytosol | 32.13 | 42.06 |
| Solyc04g080290.2.1 | Tomato | cytosol | 38.03 | 40.42 |
| Solyc01g005290.2.1 | Tomato | cytosol | 16.07 | 24.75 |
| Solyc03g118150.2.1 | Tomato | cytosol | 21.31 | 23.99 |
| Solyc01g005270.2.1 | Tomato | cytosol | 17.05 | 21.67 |
| Solyc01g005260.2.1 | Tomato | cytosol | 16.72 | 21.25 |
| Solyc03g112640.2.1 | Tomato | plastid | 17.7 | 20.61 |
| Solyc01g005280.2.1 | Tomato | cytosol | 15.41 | 19.58 |
| Solyc06g068800.2.1 | Tomato | cytosol | 19.34 | 19.09 |
| Solyc09g075970.2.1 | Tomato | cytosol | 20.0 | 14.42 |
Protein Annotations
| EnsemblPlants:Solyc09g098600.2.1 | EnsemblPlantsGene:Solyc09g098600.2 | Gene3D:3.40.525.10 | InterPro:CRAL-TRIO_dom | InterPro:CRAL-TRIO_dom_sf | InterPro:CRAL/TRIO_N_dom |
| InterPro:CRAL/TRIO_N_dom_sf | InterPro:IPR001251 | InterPro:IPR036865 | PANTHER:PTHR10174 | PANTHER:PTHR10174:SF202 | PFAM:PF00650 |
| PFAM:PF03765 | PFscan:PS50191 | SMART:SM00516 | SMART:SM01100 | SUPFAM:SSF46938 | SUPFAM:SSF52087 |
| UniParc:UPI000276C371 | UniProt:K4CX30 | MapMan:35.2 | : | : | : |
Description
No Description!
Coordinates
chr9:+:72387072..72388594
Molecular Weight (calculated)
35654.9 Da
IEP (calculated)
8.273
GRAVY (calculated)
-0.559
Length
305 amino acids
Sequence
(BLAST)
(BLAST)
001: MSFKKSQGVD LSLSSTEQQT KINEVRKLIG PALNKFPTMC SDASILRFLR ARNWHTKRSA KMLKEALIWR LENKPNMIRW DDIAKQAEPG KVYKANYFDK
101: YGRTVLVMKP GIPNPYSVEM QMRYLIYCME NSILDLKSGQ EQMVWLIDFE GWNMSSISVK VTRETARLLQ DCYPERLGLA ILYNPPKVFE SFWILVKPFL
201: EKRTYKKVKF VYPNDVDTQK VMEDLFDMEK LESCFGGKWT HDFDYVTYSN RMREGDKMMT DFVISGAPLP SDQFQLSTDE TTSNFKTSHD TSENHPNIDD
301: IKQTD
101: YGRTVLVMKP GIPNPYSVEM QMRYLIYCME NSILDLKSGQ EQMVWLIDFE GWNMSSISVK VTRETARLLQ DCYPERLGLA ILYNPPKVFE SFWILVKPFL
201: EKRTYKKVKF VYPNDVDTQK VMEDLFDMEK LESCFGGKWT HDFDYVTYSN RMREGDKMMT DFVISGAPLP SDQFQLSTDE TTSNFKTSHD TSENHPNIDD
301: IKQTD
001: MNSDSNKSSS NGFEKSLTPE EYLNKINEVR TLLGPLTEKS SEFCSDAAIT RYLAARNGHV KKATKMLKET LKWRAQYKPE EIRWEEIARE AETGKIYRAN
101: CTDKYGRTVL VMRPSCQNTK SYKGQIRILV YCMENAILNL PDNQEQMVWL IDFHGFNMSH ISLKVSRETA HVLQEHYPER LGLAIVYNPP KIFESFYKMV
201: KPFLEPKTSN KVKFVYSDDN LSNKLLEDLF DMEQLEVAFG GKNSDAGFNF EKYAERMRED DLKFYGNTTV SSTSAHLTNS DSEVSDSEMK YLEDKEDETI
301: ENGTLQSPLD TTKT
101: CTDKYGRTVL VMRPSCQNTK SYKGQIRILV YCMENAILNL PDNQEQMVWL IDFHGFNMSH ISLKVSRETA HVLQEHYPER LGLAIVYNPP KIFESFYKMV
201: KPFLEPKTSN KVKFVYSDDN LSNKLLEDLF DMEQLEVAFG GKNSDAGFNF EKYAERMRED DLKFYGNTTV SSTSAHLTNS DSEVSDSEMK YLEDKEDETI
301: ENGTLQSPLD TTKT
Arabidopsis Description
F16L1.9 protein [Source:UniProtKB/TrEMBL;Acc:Q9LM14]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.