Factsheet for Solyc01g005270.2.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 5
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion
BaCelLo:	cytosol
MultiLoc:	cytosol
Plant-mPloc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc01g005260.2.1	Tomato	cytosol	86.25	86.25
Solyc01g005280.2.1	Tomato	cytosol	84.58	84.58
Solyc01g005290.2.1	Tomato	cytosol	67.5	81.82
PGSC0003DMT400058685	Potato	cytosol	68.33	81.59
VIT_01s0011g05850.t01	Wine grape	cytosol	69.17	68.31
KRH70361	Soybean	cytosol	70.0	68.02
CDY33738	Canola	cytosol	64.17	63.11
Bra026803.1-P	Field mustard	cytosol	66.67	62.99
CDY33739	Canola	cytosol	66.25	62.85
AT1G14820.3	Thale cress	cytosol	65.42	62.3
CDX81674	Canola	cytosol	63.33	62.3
CDY51766	Canola	cytosol	63.33	62.04
CDY45292	Canola	cytosol	63.33	62.04
Bra026185.1-P	Field mustard	cytosol	63.33	62.04
Bra026802.1-P	Field mustard	cytosol	52.5	60.87
CDX81673	Canola	endoplasmic reticulum, golgi	66.25	52.3
CDX81672	Canola	cytosol	67.08	41.93
Solyc03g118150.2.1	Tomato	cytosol	35.0	31.0
Solyc06g068800.2.1	Tomato	cytosol	36.25	28.16
Solyc04g080290.2.1	Tomato	cytosol	25.42	21.25
Solyc02g085300.2.1	Tomato	cytosol	17.92	19.91
Solyc12g089130.1.1	Tomato	cytosol	19.17	19.74
Solyc03g112640.2.1	Tomato	plastid	20.0	18.32
Solyc04g072810.2.1	Tomato	cytosol	23.75	17.48
Solyc09g098600.2.1	Tomato	cytosol	21.67	17.05
Solyc09g075970.2.1	Tomato	cytosol	19.58	11.11

Protein Annotations

EnsemblPlants:Solyc01g005270.2.1	EnsemblPlantsGene:Solyc01g005270.2	Gene3D:1.10.8.20	Gene3D:3.40.525.10	InterPro:CRAL-TRIO_dom	InterPro:CRAL-TRIO_dom_sf
InterPro:CRAL/TRIO_N_dom_sf	InterPro:IPR001251	InterPro:IPR036865	PANTHER:PTHR10174	PANTHER:PTHR10174:SF121	PFAM:PF00650
PFscan:PS50191	SMART:SM00516	SUPFAM:SSF46938	SUPFAM:SSF52087	UniParc:UPI0002761ABD	UniProt:K4AS94
MapMan:35.2	:	:	:	:	:

Description

No Description!

Coordinates

chr1:-:199896..203454

Molecular Weight (calculated)

27828.9 Da

IEP (calculated)

8.732

GRAVY (calculated)

-0.302

Length

240 amino acids

Sequence
(BLAST)

001: MDRNQEIALT QMRKSVEKLG SSTDSYGEKT LMRFLIARSM DPEKAAKMFC QWKKWRAEMV PLGYISDSEV ADELAAEKLY LQGLSKSGHP IMIVKVNKHF
101: PSKDQVQFKK FVIHLLDKTI ASSFKGREIG NEKLIGILDL KNITYSNVDT RGLITGFQFL QAYYPERLAT CYLLHMPQFF VTIWRFVCRF LEKATRDKMR
201: IVTSEEEKEE FIREVGEDVL PEEYGGRAKL VLMQDVAVNY

Best Arabidopsis Sequence Match ( AT1G14820.3 )
(BLAST)

001: MEESQELALT QLRKSVEKLS SSTEGYDKPT LMRFLVARSM DPVKAAKMFV DWQKWRASMV PPTGFIPESE VQDELEFRKV CLQGPTKSGH PLVLVITSKH
101: FASKDPANFK KFVVYALDKT IASGNNGKEV GGEKLVAVID LANITYKNLD ARGLITGFQF LQSYYPERLA KCYILHMPGF FVTVWKFVCR FLEKATQEKI
201: VIVTDGEEQR KFEEEIGADA LPEEYGGRAK LTAIQDVLLP QAAPVTLTNN NV

Arabidopsis Description

AT1G14820 protein [Source:UniProtKB/TrEMBL;Acc:B9DGS8]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.