Factsheet for VIT_01s0011g05850.t01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 5
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion
BaCelLo:	cytosol
MultiLoc:	cytosol
Plant-mPloc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH70361	Soybean	cytosol	73.25	72.06
Solyc01g005270.2.1	Tomato	cytosol	68.31	69.17
PGSC0003DMT400058639	Potato	cytosol	56.79	67.98
Solyc01g005260.2.1	Tomato	cytosol	67.08	67.92
Solyc01g005290.2.1	Tomato	cytosol	54.73	67.17
PGSC0003DMT400058687	Potato	cytosol	65.43	66.25
Solyc01g005280.2.1	Tomato	cytosol	64.61	65.42
AT1G14820.3	Thale cress	cytosol	65.84	63.49
PGSC0003DMT400058685	Potato	cytosol	51.85	62.69
CDY33738	Canola	cytosol	62.14	61.89
Bra026803.1-P	Field mustard	cytosol	64.61	61.81
CDY33739	Canola	cytosol	64.2	61.66
CDY45292	Canola	cytosol	62.14	61.63
Bra026802.1-P	Field mustard	cytosol	52.26	61.35
CDY51766	Canola	cytosol	61.73	61.22
CDX81674	Canola	cytosol	61.32	61.07
Bra026185.1-P	Field mustard	cytosol	60.49	60.0
PGSC0003DMT400058682	Potato	cytosol	65.43	56.18
CDX81673	Canola	endoplasmic reticulum, golgi	63.79	50.99
CDX81672	Canola	cytosol	63.79	40.36
VIT_17s0000g00130.t01	Wine grape	cytosol	35.39	33.59
VIT_01s0150g00170.t01	Wine grape	cytosol	33.33	32.93
VIT_04s0023g01720.t01	Wine grape	cytosol, mitochondrion	25.51	21.38
VIT_17s0000g08850.t01	Wine grape	mitochondrion	21.81	20.38
VIT_18s0001g12420.t01	Wine grape	cytosol	23.46	18.1
VIT_08s0056g00730.t01	Wine grape	cytosol	23.05	17.67
VIT_18s0001g05080.t01	Wine grape	nucleus	24.69	16.62
VIT_05s0020g03350.t01	Wine grape	cytosol	20.99	12.06

Protein Annotations

Gene3D:1.10.8.20	EntrezGene:100852609	wikigene:100852609	Gene3D:3.40.525.10	MapMan:35.1	ProteinID:CCB50779
ProteinID:CCB50779.1	InterPro:CRAL-TRIO_dom	InterPro:CRAL-TRIO_dom_sf	InterPro:CRAL/TRIO_N_dom_sf	UniProt:F6HFD0	EMBL:FN595752
InterPro:IPR001251	InterPro:IPR036865	EntrezGene:LOC100852609	wikigene:LOC100852609	PFAM:PF00650	PFscan:PS50191
PANTHER:PTHR10174	PANTHER:PTHR10174:SF121	SMART:SM00516	SUPFAM:SSF46938	SUPFAM:SSF52087	UniParc:UPI00015C8B62
ArrayExpress:VIT_01s0011g05850	EnsemblPlantsGene:VIT_01s0011g05850	EnsemblPlants:VIT_01s0011g05850.t01	RefSeq:XP_003631185	RefSeq:XP_003631185.1	:

Description

No Description!

Coordinates

chr1:+:5609439..5614892

Molecular Weight (calculated)

27957.0 Da

IEP (calculated)

8.627

GRAVY (calculated)

-0.252

Length

243 amino acids

Sequence
(BLAST)

001: MEQINESALT QMRKSVQKLG SSTEKYGDPT LMRFLIARSM DSEKAAKMFV QWQKWRAALV PDGFVPESEI REELETRKIY LQGLSKNGYP VMIVKACKHF
101: PSKDHLQFKK FVAHLLDKTI ASSFKGREIG NEKLIGILDL QQITFKNVDA RGLITGFQFL QSYYPERLAR CFILNMPGFF VSVWRMVSYF LEKATLEKIV
201: IVSNEAERRD FIKEIGEEAL PEEYGGRSNL IALQDVTLTP LED

Best Arabidopsis Sequence Match ( AT1G14820.3 )
(BLAST)

001: MEESQELALT QLRKSVEKLS SSTEGYDKPT LMRFLVARSM DPVKAAKMFV DWQKWRASMV PPTGFIPESE VQDELEFRKV CLQGPTKSGH PLVLVITSKH
101: FASKDPANFK KFVVYALDKT IASGNNGKEV GGEKLVAVID LANITYKNLD ARGLITGFQF LQSYYPERLA KCYILHMPGF FVTVWKFVCR FLEKATQEKI
201: VIVTDGEEQR KFEEEIGADA LPEEYGGRAK LTAIQDVLLP QAAPVTLTNN NV

Arabidopsis Description

AT1G14820 protein [Source:UniProtKB/TrEMBL;Acc:B9DGS8]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.