Factsheet for VIT_17s0000g00130.t01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 4
mitochondrion 1
endoplasmic reticulum 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, endoplasmic reticulum, mitochondrion
BaCelLo:	cytosol
MultiLoc:	cytosol
Plant-mPloc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	endoplasmic reticulum
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH41051	Soybean	cytosol	63.67	65.73
VIT_01s0150g00170.t01	Wine grape	cytosol	62.5	65.04
GSMUA_Achr8P00480_001	Banana	cytosol	53.91	61.61
KRH54081	Soybean	cytosol	62.11	60.0
KRH63881	Soybean	cytosol	60.94	59.09
Solyc03g118150.2.1	Tomato	cytosol	62.11	58.67
PGSC0003DMT400036745	Potato	cytosol	62.11	58.67
GSMUA_Achr11P...	Banana	cytosol	55.86	58.13
KRH59732	Soybean	endoplasmic reticulum, golgi	60.94	54.55
GSMUA_Achr4P15920_001	Banana	cytosol	55.86	54.37
TraesCS4A01G333500.1	Wheat	cytosol	48.83	53.19
Zm00001d042274_P001	Maize	cytosol	51.17	52.19
TraesCS5B01G552300.1	Wheat	cytosol	48.83	51.65
TraesCS5D01G538600.1	Wheat	cytosol	47.66	50.41
EES02004	Sorghum	cytosol	48.05	50.0
TraesCS5B01G552100.1	Wheat	cytosol	47.27	50.0
HORVU5Hr1G121940.5	Barley	cytosol	48.44	49.8
TraesCS5B01G552400.1	Wheat	cytosol	47.66	49.8
TraesCS5D01G538300.1	Wheat	cytosol	49.22	49.41
TraesCS5D01G538500.1	Wheat	cytosol	47.27	49.39
EER90511	Sorghum	cytosol	48.05	49.2
TraesCS5B01G551900.1	Wheat	cytosol	48.83	49.02
TraesCS3B01G475000.1	Wheat	cytosol	46.48	48.37
PGSC0003DMT400065724	Potato	cytosol	58.2	48.22
Solyc06g068800.2.1	Tomato	cytosol	58.2	48.22
Zm00001d042275_P001	Maize	cytosol	47.27	48.21
TraesCS4A01G333800.1	Wheat	cytosol	47.66	47.84
TraesCS3D01G433700.1	Wheat	cytosol	46.48	47.79
HORVU5Hr1G122080.1	Barley	cytosol	46.09	47.77
TraesCS3A01G440900.1	Wheat	cytosol	45.7	47.56
TraesCS5B01G552200.1	Wheat	cytosol	47.27	47.45
TraesCS5B01G451100.1	Wheat	cytosol	46.09	47.2
EES02002	Sorghum	cytosol	46.88	47.06
Os01t0926800-01	Rice	cytosol, mitochondrion	45.31	46.96
TraesCS3B01G475100.1	Wheat	cytosol	43.75	46.86
Os03t0850700-01	Rice	cytosol	47.27	46.36
TraesCS3A01G441100.2	Wheat	cytosol	43.36	46.25
TraesCS3D01G433800.1	Wheat	cytosol	43.36	46.25
TraesCS3A01G441000.1	Wheat	cytosol	43.75	45.9
Zm00001d012847_P001	Maize	cytosol	47.66	44.2
TraesCS5D01G538700.1	Wheat	cytosol	46.88	37.97
HORVU3Hr1G096280.6	Barley	plastid	44.53	37.01
HORVU5Hr1G121860.2	Barley	plastid	48.05	36.39
VIT_01s0011g05850.t01	Wine grape	cytosol	33.59	35.39
HORVU3Hr1G096290.4	Barley	plastid	46.09	33.52
Zm00001d009968_P001	Maize	cytosol	32.81	26.92
Zm00001d034765_P001	Maize	cytosol	28.12	25.26
VIT_04s0023g01720.t01	Wine grape	cytosol, mitochondrion	25.78	22.76
VIT_17s0000g08850.t01	Wine grape	mitochondrion	23.05	22.69
VIT_08s0056g00730.t01	Wine grape	cytosol	26.56	21.45
VIT_18s0001g12420.t01	Wine grape	cytosol	25.39	20.63
VIT_18s0001g05080.t01	Wine grape	nucleus	26.17	18.56
VIT_05s0020g03350.t01	Wine grape	cytosol	25.78	15.6

Protein Annotations

EntrezGene:100247551	wikigene:100247551	Gene3D:3.40.525.10	MapMan:35.1	UniProt:A5BED3	EMBL:AM456511
ProteinID:CAN83160	ProteinID:CAN83160.1	ProteinID:CBI15767	ProteinID:CBI15767.3	InterPro:CRAL-TRIO_dom	InterPro:CRAL-TRIO_dom_sf
InterPro:CRAL/TRIO_N_dom	InterPro:CRAL/TRIO_N_dom_sf	EMBL:FN594950	GO:GO:0005575	GO:GO:0016020	GO:GO:0016021
InterPro:IPR001251	InterPro:IPR036865	EntrezGene:LOC100247551	wikigene:LOC100247551	PFAM:PF00650	PFscan:PS50191
PANTHER:PTHR10174	PANTHER:PTHR10174:SF198	SMART:SM00516	SMART:SM01100	SUPFAM:SSF46938	SUPFAM:SSF52087
TIGR:TC57672	TMHMM:TMhelix	UniParc:UPI000152439E	ArrayExpress:VIT_17s0000g00130	EnsemblPlantsGene:VIT_17s0000g00130	EnsemblPlants:VIT_17s0000g00130.t01
unigene:Vvi.15237	RefSeq:XP_002284696	RefSeq:XP_002284696.1	RefSeq:XP_010663813.1	SEG:seg	:

Description

No Description!

Coordinates

chr17:+:52792..54869

Molecular Weight (calculated)

29582.9 Da

IEP (calculated)

9.108

GRAVY (calculated)

-0.376

Length

256 amino acids

Sequence
(BLAST)

001: MSFDEKLEEA RDGEGSMKIN EMEQTKVSLM RTYVESQDPS SRDPSSQKAD DLMIRRFLRA RDLDVEKASA LFLRYLKWRQ TFVPNGSISL SQVRNEVAQN
101: KMFLQGLDKQ GRPISVVLGA KHFQYQGSLD EFKRFLVYAF DKICTRMPPG QEKFVVIGDL EGWGYSNSDM RAYLGALSIL QDYYPERLGK LFIIHAPYIF
201: MAIWKIVYPF IDKNTKKKIV LVEKTKLRST LLEEIDESQL PQIYGGKLPL VPIQDS

Best Arabidopsis Sequence Match ( AT1G01630.1 )
(BLAST)

001: MENKETKQEP AAAAEQKTVP LIEDEIERSK VGIMRALCDR QDPETKEVDD LMIRRFLRAR DLDIEKASTM FLNYLTWKRS MLPKGHIPEA EIANDLSHNK
101: MCMQGHDKMG RPIAVAIGNR HNPSKGNPDE FKRFVVYTLE KICARMPRGQ EKFVAIGDLQ GWGYSNCDIR GYLAALSTLQ DCYPERLGKL YIVHAPYIFM
201: TAWKVIYPFI DANTKKKIVF VENKKLTPTL LEDIDESQLP DIYGGKLPLV PIQET

Arabidopsis Description

Polyphosphoinositide binding protein, putative [Source:UniProtKB/TrEMBL;Acc:Q9LQ96]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.