Factsheet for TraesCS3A01G441100.2

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
TraesCS4A01G498700.1
TraesCS6A01G180500.1
TraesCS6A01G298800.1
TraesCS6B01G328200.1
TraesCS6D01G164600.1
TraesCS6D01G278500.1
TraesCS7A01G001900.1
TraesCS7A01G200700.1
TraesCS7B01G107500.1
TraesCS7D01G001600.2
TraesCS7D01G204000.1

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G01630.1	TraesCS6A01G298800.1	AT1G68060.1	21798944
AT1G01630.1	TraesCS6B01G328200.1	AT1G68060.1	21798944
AT1G01630.1	TraesCS6D01G278500.1	AT1G68060.1	21798944
AT1G01630.1	TraesCS7A01G200700.1	AT1G68060.1	21798944
AT1G01630.1	TraesCS7B01G107500.1	AT1G68060.1	21798944
AT1G01630.1	TraesCS7D01G204000.1	AT1G68060.1	21798944
AT1G01630.1	TraesCS4A01G498700.1	AT3G54850.1	21798944
AT1G01630.1	TraesCS7A01G001900.1	AT3G54850.1	21798944
AT1G01630.1	TraesCS7D01G001600.2	AT3G54850.1	21798944
AT1G01630.1	TraesCS6A01G180500.1	AT4G32190.1	21798944
AT1G01630.1	TraesCS6D01G164600.1	AT4G32190.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3D01G433800.1	Wheat	cytosol	95.42	95.42
TraesCS3B01G475100.1	Wheat	cytosol	95.0	95.4
TraesCS3A01G441000.1	Wheat	cytosol	81.67	80.33
TraesCS3A01G440900.1	Wheat	cytosol	80.0	78.05
Zm00001d042274_P001	Maize	cytosol	73.75	70.52
EES02004	Sorghum	cytosol	71.67	69.92
Os01t0926800-01	Rice	cytosol, mitochondrion	71.67	69.64
HORVU3Hr1G096280.6	Barley	plastid	88.33	68.83
Zm00001d042275_P001	Maize	cytosol	69.58	66.53
EES02002	Sorghum	cytosol	70.42	66.27
TraesCS4A01G333500.1	Wheat	cytosol	52.5	53.62
TraesCS4A01G333800.1	Wheat	cytosol	55.0	51.76
GSMUA_Achr4P15920_001	Banana	cytosol	51.67	47.15
Bra032645.1-P	Field mustard	cytosol	44.58	46.32
KRH41051	Soybean	cytosol	45.83	44.35
Bra033247.1-P	Field mustard	cytosol	47.08	44.31
CDX90047	Canola	cytosol	47.08	44.31
AT1G01630.1	Thale cress	cytosol	46.67	43.92
CDY15164	Canola	cytosol	46.25	43.53
KRH54081	Soybean	cytosol	47.92	43.4
VIT_17s0000g00130.t01	Wine grape	cytosol	46.25	43.36
VIT_01s0150g00170.t01	Wine grape	cytosol	44.17	43.09
KRH63881	Soybean	cytosol	46.67	42.42
CDY38020	Canola	cytosol	45.42	41.6
PGSC0003DMT400036745	Potato	cytosol	45.83	40.59
Solyc03g118150.2.1	Tomato	cytosol	45.83	40.59
KRH59732	Soybean	endoplasmic reticulum, golgi	42.5	35.66
Solyc06g068800.2.1	Tomato	cytosol	43.33	33.66
PGSC0003DMT400065724	Potato	cytosol	43.33	33.66
Zm00001d009968_P001	Maize	cytosol	40.42	31.09
Zm00001d034765_P001	Maize	cytosol	36.25	30.53
TraesCS4A01G259500.1	Wheat	cytosol	27.92	22.95
TraesCS4A01G259600.1	Wheat	cytosol	27.08	22.26
TraesCS4A01G259700.1	Wheat	cytosol	27.08	22.26
TraesCS3A01G181100.2	Wheat	nucleus	27.5	21.78
TraesCS7A01G094800.2	Wheat	cytosol	25.0	21.28
TraesCS4A01G395100.1	Wheat	cytosol	24.17	20.64
TraesCS7A01G460600.1	Wheat	mitochondrion, plastid	22.5	20.61
TraesCS6A01G302200.1	Wheat	nucleus	24.17	14.39
TraesCS4A01G065900.1	Wheat	cytosol	25.42	13.29

Protein Annotations

EnsemblPlants:TraesCS3A01G441100.2	EnsemblPlantsGene:TraesCS3A01G441100	Gene3D:3.40.525.10	InterPro:CRAL-TRIO_dom	InterPro:CRAL-TRIO_dom_sf	InterPro:CRAL/TRIO_N_dom_sf
InterPro:IPR001251	InterPro:IPR036865	PANTHER:PTHR10174	PANTHER:PTHR10174:SF158	PFAM:PF00650	PFscan:PS50191
SMART:SM00516	SUPFAM:SSF46938	SUPFAM:SSF52087	TIGR:cd00170	MapMan:35.2	:

Description

No Description!

Coordinates

chr3A:+:683362370..683364488

Molecular Weight (calculated)

27055.2 Da

IEP (calculated)

8.753

GRAVY (calculated)

-0.081

Length

240 amino acids

Sequence
(BLAST)

001: MASSIGGGDA GEGEWLKIAE LRAMAEAQDP HVKEVDSLTL RRFLRARGHV VGKASAMLLK FVAWRREAVP GGVMPAELVR TELSHEMTYM AGTDRAGRPV
101: MLAFPAKHFS ATRDMAGFKR YIVYLFDAMC ARIPRGQEKF LCVVDLKGWG YANCDVRAYI AAIEILQSYY PERLGKALMI HVPYLFMKAW KLVQPFIDAN
201: TRDKFVFVDD KSLEETLRRE MEDGQLPEMY GGKMPIVPLA

Best Arabidopsis Sequence Match ( AT1G01630.1 )
(BLAST)

001: MENKETKQEP AAAAEQKTVP LIEDEIERSK VGIMRALCDR QDPETKEVDD LMIRRFLRAR DLDIEKASTM FLNYLTWKRS MLPKGHIPEA EIANDLSHNK
101: MCMQGHDKMG RPIAVAIGNR HNPSKGNPDE FKRFVVYTLE KICARMPRGQ EKFVAIGDLQ GWGYSNCDIR GYLAALSTLQ DCYPERLGKL YIVHAPYIFM
201: TAWKVIYPFI DANTKKKIVF VENKKLTPTL LEDIDESQLP DIYGGKLPLV PIQET

Arabidopsis Description

Polyphosphoinositide binding protein, putative [Source:UniProtKB/TrEMBL;Acc:Q9LQ96]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.