Factsheet for TraesCS3A01G441000.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
TraesCS4A01G498700.1
TraesCS6A01G180500.1
TraesCS6A01G298800.1
TraesCS6B01G328200.1
TraesCS6D01G164600.1
TraesCS6D01G278500.1
TraesCS7A01G001900.1
TraesCS7A01G200700.1
TraesCS7B01G107500.1
TraesCS7D01G001600.2
TraesCS7D01G204000.1

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G01630.1	TraesCS6A01G298800.1	AT1G68060.1	21798944
AT1G01630.1	TraesCS6B01G328200.1	AT1G68060.1	21798944
AT1G01630.1	TraesCS6D01G278500.1	AT1G68060.1	21798944
AT1G01630.1	TraesCS7A01G200700.1	AT1G68060.1	21798944
AT1G01630.1	TraesCS7B01G107500.1	AT1G68060.1	21798944
AT1G01630.1	TraesCS7D01G204000.1	AT1G68060.1	21798944
AT1G01630.1	TraesCS4A01G498700.1	AT3G54850.1	21798944
AT1G01630.1	TraesCS7A01G001900.1	AT3G54850.1	21798944
AT1G01630.1	TraesCS7D01G001600.2	AT3G54850.1	21798944
AT1G01630.1	TraesCS6A01G180500.1	AT4G32190.1	21798944
AT1G01630.1	TraesCS6D01G164600.1	AT4G32190.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3A01G440900.1	Wheat	cytosol	84.43	83.74
TraesCS3A01G441100.2	Wheat	cytosol	80.33	81.67
EES02004	Sorghum	cytosol	70.08	69.51
Zm00001d042274_P001	Maize	cytosol	70.9	68.92
Os01t0926800-01	Rice	cytosol, mitochondrion	69.67	68.83
Zm00001d042275_P001	Maize	cytosol	68.03	66.14
EES02002	Sorghum	cytosol	68.03	65.1
TraesCS4A01G333500.1	Wheat	cytosol	51.23	53.19
TraesCS4A01G333800.1	Wheat	cytosol	54.51	52.16
Bra032645.1-P	Field mustard	cytosol	45.08	47.62
GSMUA_Achr4P15920_001	Banana	cytosol	50.0	46.39
KRH41051	Soybean	cytosol	47.13	46.37
AT1G01630.1	Thale cress	cytosol	47.13	45.1
Bra033247.1-P	Field mustard	cytosol	47.13	45.1
CDX90047	Canola	cytosol	47.13	45.1
CDY15164	Canola	cytosol	46.31	44.31
VIT_01s0150g00170.t01	Wine grape	cytosol	44.67	44.31
VIT_17s0000g00130.t01	Wine grape	cytosol	45.9	43.75
KRH54081	Soybean	cytosol	46.72	43.02
CDY38020	Canola	cytosol	45.9	42.75
KRH63881	Soybean	cytosol	45.9	42.42
PGSC0003DMT400036745	Potato	cytosol	45.49	40.96
Solyc03g118150.2.1	Tomato	cytosol	45.49	40.96
KRH59732	Soybean	endoplasmic reticulum, golgi	43.44	37.06
Solyc06g068800.2.1	Tomato	cytosol	43.03	33.98
PGSC0003DMT400065724	Potato	cytosol	42.62	33.66
Zm00001d009968_P001	Maize	cytosol	38.11	29.81
Zm00001d034765_P001	Maize	cytosol	32.79	28.07
TraesCS4A01G259500.1	Wheat	cytosol	26.64	22.26
TraesCS7A01G460600.1	Wheat	mitochondrion, plastid	23.77	22.14
TraesCS4A01G259700.1	Wheat	cytosol	25.82	21.58
TraesCS7A01G094800.2	Wheat	cytosol	24.18	20.92
TraesCS4A01G259600.1	Wheat	cytosol	25.0	20.89
TraesCS4A01G395100.1	Wheat	cytosol	23.77	20.64
TraesCS3A01G181100.2	Wheat	nucleus	24.59	19.8
TraesCS6A01G302200.1	Wheat	nucleus	24.18	14.64
TraesCS4A01G065900.1	Wheat	cytosol	25.0	13.29

Protein Annotations

EnsemblPlants:TraesCS3A01G441000.1	EnsemblPlantsGene:TraesCS3A01G441000	Gene3D:3.40.525.10	InterPro:CRAL-TRIO_dom	InterPro:CRAL-TRIO_dom_sf	InterPro:CRAL/TRIO_N_dom
InterPro:CRAL/TRIO_N_dom_sf	InterPro:IPR001251	InterPro:IPR036865	PANTHER:PTHR10174	PANTHER:PTHR10174:SF158	PFAM:PF00650
PFscan:PS50191	SMART:SM00516	SMART:SM01100	SUPFAM:SSF46938	SUPFAM:SSF52087	TIGR:cd00170
MapMan:35.2	:	:	:	:	:

Description

No Description!

Coordinates

chr3A:+:683357004..683361041

Molecular Weight (calculated)

27068.0 Da

IEP (calculated)

9.278

GRAVY (calculated)

-0.091

Length

244 amino acids

Sequence
(BLAST)

001: MASSVGGDAG EGEWLKVAEL RAMAGAQDPH VKEVDNLTLR RFLRARGHDV GKASAMLLKF MAWRREAVPG GVGAVMPAEL VRAEPSRELA SMGGVDRAGR
101: PVLLAFPAKH FSANRDMAGF KRLVVYLLDS VCSRIPRGQD KFIVVVDLKG WGYANCDVRA YVAAIEIMQS YYPERLGKAL MVHVPYIFMK AWKMVYPFID
201: ANTRDKFVFV DNKSLEGALR REMDESQVPE MYGGKLPVAP LTDD

Best Arabidopsis Sequence Match ( AT1G01630.1 )
(BLAST)

001: MENKETKQEP AAAAEQKTVP LIEDEIERSK VGIMRALCDR QDPETKEVDD LMIRRFLRAR DLDIEKASTM FLNYLTWKRS MLPKGHIPEA EIANDLSHNK
101: MCMQGHDKMG RPIAVAIGNR HNPSKGNPDE FKRFVVYTLE KICARMPRGQ EKFVAIGDLQ GWGYSNCDIR GYLAALSTLQ DCYPERLGKL YIVHAPYIFM
201: TAWKVIYPFI DANTKKKIVF VENKKLTPTL LEDIDESQLP DIYGGKLPLV PIQET

Arabidopsis Description

Polyphosphoinositide binding protein, putative [Source:UniProtKB/TrEMBL;Acc:Q9LQ96]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.