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Wheat
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Wheat
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • nucleus 2
  • cytosol 2
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, mitochondrion, nucleus
BaCelLo:nucleus
MultiLoc:cytosol
PProwler:mitochondrion
WoLF PSORT:cytosol
YLoc:nucleus
PPI

Inferred distinct locusB in Crop

locusBlocations
TraesCS1A01G207800.1
TraesCS1A01G207900.1
TraesCS1B01G221500.1
TraesCS1B01G221900.1
TraesCS1D01G211100.1
TraesCS1D01G211200.1
TraesCS3A01G302600.1
TraesCS3B01G333800.1
TraesCS3D01G299200.1
TraesCS6D01G319000.1

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT1G68060.1 TraesCS1A01G207800.1 AT2G45920.1 21798944
AT1G68060.1 TraesCS1A01G207900.1 AT2G45920.1 21798944
AT1G68060.1 TraesCS1B01G221500.1 AT2G45920.1 21798944
AT1G68060.1 TraesCS1B01G221900.1 AT2G45920.1 21798944
AT1G68060.1 TraesCS1D01G211100.1 AT2G45920.1 21798944
AT1G68060.1 TraesCS1D01G211200.1 AT2G45920.1 21798944
AT1G68060.1 TraesCS6D01G319000.1 AT2G45920.1 21798944
AT1G68060.1 TraesCS3A01G302600.1 AT5G61010.1 21798944
AT1G68060.1 TraesCS3B01G333800.1 AT5G61010.1 21798944
AT1G68060.1 TraesCS3D01G299200.1 AT5G61010.1 21798944
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS6B01G328200.1 Wheat cytosol 92.82 96.7
TraesCS6A01G298800.1 Wheat cytosol 95.16 95.16
Os02t0736100-01 Rice cytosol 86.14 86.14
EES07297 Sorghum cytosol 81.97 83.22
Zm00001d017961_P003 Maize cytosol 81.64 82.88
HORVU0Hr1G017080.1 Barley nucleus, plastid 92.65 82.34
TraesCS7D01G204000.1 Wheat nucleus 81.14 80.07
TraesCS5D01G000100.1 Wheat cytosol 70.95 73.53
KRH49658 Soybean cytosol 74.46 73.0
KRH70354 Soybean endoplasmic reticulum 74.12 72.55
VIT_01s0011g05790.t01 Wine grape cytosol 76.63 72.06
Solyc04g008040.2.1 Tomato nucleus 73.96 71.8
PGSC0003DMT400075913 Potato cytosol 73.79 71.64
KRH60419 Soybean cytosol, plastid 73.12 71.1
TraesCS2D01G554500.1 Wheat cytosol 44.07 70.59
KRH41720 Soybean cytosol 72.45 70.45
PGSC0003DMT400056068 Potato cytosol 72.62 69.94
CDX84971 Canola cytosol 71.79 69.92
Solyc01g005330.2.1 Tomato cytosol 72.45 69.77
Solyc05g017980.2.1 Tomato cytosol 72.45 69.77
Bra010978.1-P Field mustard nucleus 70.95 69.56
CDY40783 Canola plastid 71.12 69.49
CDX96050 Canola nucleus, plastid 72.45 69.44
Bra004279.1-P Field mustard nucleus, plastid 72.45 69.44
CDY04200 Canola plastid 71.45 69.37
CDY27573 Canola nucleus, plastid 72.45 69.33
CDY07403 Canola nucleus, plastid 71.45 69.26
PGSC0003DMT400051425 Potato cytosol, nucleus, plasma membrane 72.12 69.23
Bra012493.1-P Field mustard nucleus 70.62 69.0
Bra004053.1-P Field mustard nucleus, plastid 71.12 68.93
AT1G68060.1 Thale cress nucleus, plastid 71.45 68.81
CDY01879 Canola nucleus 71.62 68.75
CDY03865 Canola nucleus 70.62 68.67
CDY36126 Canola nucleus 70.45 68.4
Bra032784.1-P Field mustard nucleus 67.45 67.79
AT1G14840.1 Thale cress plastid 67.78 67.22
CDX81676 Canola plastid 66.28 67.06
Bra026800.1-P Field mustard nucleus 66.61 66.39
Bra025859.1-P Field mustard nucleus 50.08 66.23
Bra026184.1-P Field mustard nucleus 65.78 66.11
CDY33736 Canola nucleus 66.61 65.95
CDY45293 Canola nucleus 66.11 65.89
CDY51769 Canola nucleus 66.11 65.78
CDY17639 Canola nucleus, plastid 68.28 65.65
AT2G01750.2 Thale cress nucleus 68.78 65.4
Bra024854.1-P Field mustard nucleus, plastid 68.61 65.24
CDY36256 Canola nucleus, plastid 67.45 64.95
AT1G24764.3 Thale cress endoplasmic reticulum, extracellular 72.79 62.91
CDY24415 Canola nucleus 23.71 55.69
TraesCS4D01G244000.1 Wheat nucleus 32.05 36.16
Protein Annotations
EnsemblPlants:TraesCS6D01G278500.1EnsemblPlantsGene:TraesCS6D01G278500GO:GO:0003674GO:GO:0005488GO:GO:0005515GO:GO:0007010
GO:GO:0008017GO:GO:0008150GO:GO:0009987GO:GO:0016043InterPro:MAP70ncoils:Coil
PANTHER:PTHR31246PANTHER:PTHR31246:SF4PFAM:PF07058SEG:segMapMan:35.1:
Description
No Description!
Coordinates
chr6D:+:386925383..386931947
Molecular Weight (calculated)
66334.9 Da
IEP (calculated)
8.433
GRAVY (calculated)
-0.788
Length
599 amino acids
Sequence
(BLAST)
001: MADGGGGGEE GNASAHRGSS RRRGAAQVGL DADELLTLMH GSDPVKVELN RLENEVRDKD RELGEAQAEI KALRLSERAR EKAVEELTDE LEKLDEKLKL
101: TESLLDSKNL ELKKTNDEKK AAMAAQFAAE ATLRRVHAAQ KDDDMPPIEA ILAPLEAELK LARQEIAKLQ EDNRALDRLT KQKEAALLEA ERTVQTALAK
201: AAMVDDMQNK NQDLMKQIEI CQEENKILDR LHRQKVAEVE KLSQTVRELE EAVLAGGAAA NAVRDYQRKV QEMNEERKVL DRELARTKVT ANRVAVVVAN
301: EWKDGNDKVM PVKQWLEERR FLQGEMQQLR DKLAIAERTA RSEAQVKEKY QWRLKVLEDG LRGPPSGSSR PPTEGRNTSS GSSRRLSLGG ADNMSKVSPV
401: GALMRRSPSF NSRPSLSTGS SLVLKHAKGT SRSFDGGTRS LDRGKVLVNG PHLLNRSTDA VGDCEPTDSW KASGEEKNTE TTNSDSTDMV SGVLYDMLQK
501: EVVSLRKACH EKDQSLKDKD DAIEMLAKKV DTLTKAMEVE AKKMRREVAA MEKEVSAMRL EKEQENKAKR LGSLRGPGTV SQALPGRSAP RGGLARNVQ
Best Arabidopsis Sequence Match ( AT1G24764.1 )
(BLAST)
001: MSDVSGDGDL SATVTEHEVT PQPPVSSATY PSLTVSASYK ESSGGKSSSK RRPIRPSFDA AADNEFITLL HGSDPVKVEL NRLENEVRDK DRELGEANAE
101: IKALRLSERQ REKAVEELTE ELTKLDEKLK LTESILESKN LEIKKINEEK KASMAAQFAA EATLRRVHAA QKDDDMPPIE AILAPLEAEL KLARSEIGKL
201: QEDNRALDRL TKSKEAALLE AERTVEAAMA KAAMVDDLQN KNQELMKQIE ICQEENKILD RMHRQKVAEV EKLTQTVREL EEAVLAGGAA ANAVRDYQRK
301: FQEMNEERKT LDRELARAKV TANRVATVVA NEWKDGNDKV MPVKQWLEER RFLQGEMQQL RDKLAITDRA AKSEAQLKEK FQLRLKVLEE TLRGTSSSAT
401: RNTPEARSMS NGPSRRQSLG GAENLQKFTS NGALSKKAPA SQMRHSLSIN STSVLKNAKG TSKSFDGGTR SVDRGKALLN GPGNYSFNKA TDDSKEAESG
501: NGWKENSEEK PQSEDPEAAT EDSVPGVLYD LLQKEVVSLR KASNEKDQSL KDKDDAIEML AKKVETLTKA MEVEAKKMRR EVAAMEKEVA AMRVEKDQDA
601: RAKRFSNSKS PSNTAQILAG RAAGRSGGLT KSTQ
Arabidopsis Description
ATMAP70-2microtubule-associated proteins 70-2 [Source:TAIR;Acc:AT1G24764]
SUBAcon: [nucleus]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.