Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 1
- mitochondrion 1
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY36126 | Canola | nucleus | 81.96 | 33.87 |
| CDY40783 | Canola | plastid | 72.94 | 30.34 |
| CDX84971 | Canola | cytosol | 72.94 | 30.24 |
| CDY27573 | Canola | nucleus, plastid | 73.33 | 29.87 |
| CDY03865 | Canola | nucleus | 71.37 | 29.55 |
| CDY04200 | Canola | plastid | 68.63 | 28.36 |
| AT1G24764.3 | Thale cress | endoplasmic reticulum, extracellular | 76.86 | 28.28 |
| CDX96050 | Canola | nucleus, plastid | 68.24 | 27.84 |
| CDY01879 | Canola | nucleus | 67.45 | 27.56 |
| CDY07403 | Canola | nucleus, plastid | 66.27 | 27.35 |
| KRH49658 | Soybean | cytosol | 60.78 | 25.37 |
| KRH70354 | Soybean | endoplasmic reticulum | 60.78 | 25.33 |
| KRH60419 | Soybean | cytosol, plastid | 59.22 | 24.51 |
| KRH41720 | Soybean | cytosol | 58.82 | 24.35 |
| TraesCS6B01G328200.1 | Wheat | cytosol | 54.9 | 24.35 |
| VIT_01s0011g05790.t01 | Wine grape | cytosol | 60.39 | 24.18 |
| Solyc01g005330.2.1 | Tomato | cytosol | 58.04 | 23.79 |
| TraesCS6D01G278500.1 | Wheat | cytosol | 55.69 | 23.71 |
| Os02t0736100-01 | Rice | cytosol | 55.69 | 23.71 |
| TraesCS6A01G298800.1 | Wheat | cytosol | 55.29 | 23.54 |
| PGSC0003DMT400056068 | Potato | cytosol | 57.25 | 23.47 |
| PGSC0003DMT400051425 | Potato | cytosol, nucleus, plasma membrane | 57.25 | 23.4 |
| Solyc05g017980.2.1 | Tomato | cytosol | 56.86 | 23.31 |
| TraesCS7B01G107500.1 | Wheat | nucleus | 55.29 | 23.23 |
| TraesCS7D01G204000.1 | Wheat | nucleus | 55.29 | 23.23 |
| Solyc04g008040.2.1 | Tomato | nucleus | 56.08 | 23.18 |
| TraesCS7A01G200700.1 | Wheat | nucleus | 54.9 | 23.06 |
| PGSC0003DMT400075913 | Potato | cytosol | 55.69 | 23.01 |
| CDX81676 | Canola | plastid | 53.33 | 22.97 |
| HORVU7Hr1G041170.1 | Barley | nucleus | 55.29 | 22.74 |
| EER89530 | Sorghum | nucleus | 52.94 | 22.28 |
| CDY45293 | Canola | nucleus | 51.76 | 21.96 |
| Os06t0251700-01 | Rice | nucleus | 52.16 | 21.88 |
| CDY33736 | Canola | nucleus | 51.76 | 21.82 |
| CDY51769 | Canola | nucleus | 50.98 | 21.59 |
| Zm00001d037291_P001 | Maize | nucleus | 50.98 | 21.45 |
| Zm00001d044724_P001 | Maize | cytosol | 50.98 | 21.45 |
| EES07297 | Sorghum | cytosol | 49.41 | 21.36 |
| HORVU0Hr1G017080.1 | Barley | nucleus, plastid | 55.69 | 21.07 |
| CDY36256 | Canola | nucleus, plastid | 50.2 | 20.58 |
| CDY17639 | Canola | nucleus, plastid | 49.8 | 20.39 |
| Zm00001d017961_P003 | Maize | cytosol | 46.27 | 20.0 |
| CDY35590 | Canola | cytosol | 29.8 | 14.79 |
| CDY42967 | Canola | cytosol, nucleus, plasma membrane | 28.24 | 14.4 |
| CDY09638 | Canola | cytosol | 27.06 | 13.72 |
| CDX90483 | Canola | cytosol | 27.06 | 13.72 |
| CDX95377 | Canola | cytosol | 1.18 | 4.76 |
| CDX84402 | Canola | cytosol | 0.78 | 3.28 |
| CDX95376 | Canola | cytosol | 0.78 | 3.23 |
Protein Annotations
| EnsemblPlants:CDY24415 | EnsemblPlantsGene:GSBRNA2T00026658001 | GO:A0A078GD28 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 |
| GO:GO:0007010 | GO:GO:0008017 | GO:GO:0008150 | GO:GO:0009987 | GO:GO:0016043 | InterPro:MAP70 |
| ncoils:Coil | PANTHER:PTHR31246 | PANTHER:PTHR31246:SF2 | PFAM:PF07058 | ProteinID:CDY24415 | ProteinID:CDY24415.1 |
| UniParc:UPI0004EB73F0 | UniProt:A0A078GD28 | MapMan:35.1 | : | : | : |
Description
BnaCnng04820DBnaCnng04820D protein [Source:UniProtKB/TrEMBL;Acc:A0A078GD28]
Coordinates
chrLK032158:+:392959..394280
Molecular Weight (calculated)
28195.2 Da
IEP (calculated)
10.308
GRAVY (calculated)
-0.883
Length
255 amino acids
Sequence
(BLAST)
(BLAST)
001: MTLTIVSEVP SSRYKLFKLI LHDDVEKFQL RLKVLEEALK GTSSSSIRNT SETRTMRSGP SRRQSLGGSE NLQKFPSNGA LSKKAPASQM RHSLSINSTS
101: MLKNSKGTSK SFDGGTRSLD RGKALLNGPG NYSFNKASDE SKEPEPATGW KDSSEEKTQS ENTQAASEDS VPGVLYDLLQ KEVVSLRKAS HEKDQSLKDK
201: DDAIEMLAKK VETLTKAMEV EAKKMRREVA AMRVEKDQDN RAKRFSNIKS SSNTA
101: MLKNSKGTSK SFDGGTRSLD RGKALLNGPG NYSFNKASDE SKEPEPATGW KDSSEEKTQS ENTQAASEDS VPGVLYDLLQ KEVVSLRKAS HEKDQSLKDK
201: DDAIEMLAKK VETLTKAMEV EAKKMRREVA AMRVEKDQDN RAKRFSNIKS SSNTA
001: MEERGFMSPS LAISASYREG GSKGMSRRRS MRPSFDADNE FMNLLHGSDP VRIELNRLEN EVRDKDRELS EGQAEIKALR LSERQREKAV EELTEELGKM
101: AEKLKLIENL LESKNLEIKK INEEKKASMA AQFAAEASLR RVHAAQKDDD MPPIEAILAP LEAELKLSRQ EIAKLQDDNK SLDRLTKSKE AALLDAERTV
201: QSALAKASMV DDLQNKNQEL MKQIEICQEE NRIIDKMHRQ KVAEVEKLMQ SVRELEEAVL AGGAAANAVR DYQRKFQEMN EERKILEREL ARAKVNANRV
301: ATVVANEWKD SNDKGEMQQL RDKLAIADRA AKSEAQLKEK FLLRLRVLEE SLKGPTSSSS RGTSVGRSSS NGPTRRQSLG GAETSPKITS NGSLIKRTPS
401: SQLRSLTASA STVLKHAKGT SRSFDGGTRS LDRSKVLING PRSNFPLNHK SSEGTSRGES PSSIKGEEES ADKATNNDSV PGVLYDLLQK EVITLRKAAH
501: EKDQSLRDKD EAIEMLAKKV ETLTKAMDVE AKKMRREVAV MGKEVAAMRV VDKGQQDSKT RRLSVSKGNT AQLLSGRVSG RIGMTRSTQ
101: AEKLKLIENL LESKNLEIKK INEEKKASMA AQFAAEASLR RVHAAQKDDD MPPIEAILAP LEAELKLSRQ EIAKLQDDNK SLDRLTKSKE AALLDAERTV
201: QSALAKASMV DDLQNKNQEL MKQIEICQEE NRIIDKMHRQ KVAEVEKLMQ SVRELEEAVL AGGAAANAVR DYQRKFQEMN EERKILEREL ARAKVNANRV
301: ATVVANEWKD SNDKGEMQQL RDKLAIADRA AKSEAQLKEK FLLRLRVLEE SLKGPTSSSS RGTSVGRSSS NGPTRRQSLG GAETSPKITS NGSLIKRTPS
401: SQLRSLTASA STVLKHAKGT SRSFDGGTRS LDRSKVLING PRSNFPLNHK SSEGTSRGES PSSIKGEEES ADKATNNDSV PGVLYDLLQK EVITLRKAAH
501: EKDQSLRDKD EAIEMLAKKV ETLTKAMDVE AKKMRREVAV MGKEVAAMRV VDKGQQDSKT RRLSVSKGNT AQLLSGRVSG RIGMTRSTQ
Arabidopsis Description
MAP70.4Microtubule-associated protein 70-4 [Source:UniProtKB/Swiss-Prot;Acc:Q9LQU7]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.