Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra026236.1-P | Field mustard | cytosol | 89.88 | 92.96 |
| CDY42967 | Canola | cytosol, nucleus, plasma membrane | 87.94 | 90.4 |
| CDX90483 | Canola | cytosol | 81.71 | 83.5 |
| CDY09638 | Canola | cytosol | 80.93 | 82.7 |
| AT4G17220.1 | Thale cress | cytosol | 77.82 | 77.97 |
| PGSC0003DMT400034592 | Potato | cytosol | 34.82 | 68.06 |
| Solyc04g015010.2.1 | Tomato | cytosol | 50.78 | 53.59 |
| PGSC0003DMT400038827 | Potato | cytosol | 50.97 | 51.88 |
| KRH11576 | Soybean | cytosol | 56.23 | 50.61 |
| KRH36588 | Soybean | cytosol | 55.84 | 50.26 |
| Solyc11g012660.1.1 | Tomato | nucleus | 54.47 | 50.0 |
| VIT_00s0194g00260.t01 | Wine grape | cytosol | 56.03 | 49.32 |
| KRH01966 | Soybean | mitochondrion | 53.31 | 48.58 |
| KRH51187 | Soybean | cytosol | 52.92 | 47.47 |
| GSMUA_Achr7P26720_001 | Banana | cytosol | 45.72 | 45.63 |
| CDX84971 | Canola | cytosol | 47.08 | 39.35 |
| CDX81676 | Canola | plastid | 45.14 | 39.19 |
| CDY36126 | Canola | nucleus | 46.89 | 39.06 |
| CDY36256 | Canola | nucleus, plastid | 47.08 | 38.91 |
| CDX96050 | Canola | nucleus, plastid | 47.08 | 38.72 |
| CDY17639 | Canola | nucleus, plastid | 46.89 | 38.68 |
| CDY07403 | Canola | nucleus, plastid | 46.5 | 38.67 |
| CDY27573 | Canola | nucleus, plastid | 47.08 | 38.66 |
| CDY01879 | Canola | nucleus | 46.89 | 38.62 |
| CDY45293 | Canola | nucleus | 45.14 | 38.6 |
| CDY51769 | Canola | nucleus | 45.14 | 38.54 |
| CDY40783 | Canola | plastid | 45.91 | 38.5 |
| CDY04200 | Canola | plastid | 46.11 | 38.41 |
| Os03t0215700-01 | Rice | cytosol | 38.33 | 38.25 |
| Zm00001d028219_P001 | Maize | cytosol | 37.94 | 38.16 |
| CDY33736 | Canola | nucleus | 44.75 | 38.02 |
| EER95273 | Sorghum | cytosol | 37.55 | 37.77 |
| CDX84402 | Canola | cytosol | 4.47 | 37.7 |
| CDY03865 | Canola | nucleus | 45.14 | 37.66 |
| CDX95376 | Canola | cytosol | 4.47 | 37.1 |
| TraesCS4B01G245400.1 | Wheat | nucleus | 37.55 | 36.35 |
| HORVU4Hr1G067630.12 | Barley | nucleus | 36.97 | 36.19 |
| TraesCS4A01G078900.2 | Wheat | nucleus | 37.35 | 36.16 |
| TraesCS4D01G244000.1 | Wheat | nucleus | 36.77 | 35.59 |
| CDX95377 | Canola | cytosol | 4.09 | 33.33 |
| CDY24415 | Canola | nucleus | 14.79 | 29.8 |
Protein Annotations
| MapMan:35.1 | GO:A0A078HB16 | UniProt:A0A078HB16 | EnsemblPlants:CDY35590 | ProteinID:CDY35590 | ProteinID:CDY35590.1 |
| ncoils:Coil | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0007010 | GO:GO:0008017 |
| GO:GO:0008150 | GO:GO:0009987 | GO:GO:0016043 | EnsemblPlantsGene:GSBRNA2T00058941001 | InterPro:MAP70 | PFAM:PF07058 |
| PANTHER:PTHR31246 | PANTHER:PTHR31246:SF5 | UniParc:UPI0004EEE2BC | SEG:seg | : | : |
Description
BnaC01g21120DBnaC01g21120D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HB16]
Coordinates
chrLK032356:+:59953..62409
Molecular Weight (calculated)
58720.1 Da
IEP (calculated)
8.446
GRAVY (calculated)
-0.860
Length
514 amino acids
Sequence
(BLAST)
(BLAST)
001: MTAGENPFAS NTSSLQNQLR EKDKELLAAK AEIEALRTNE ELKNREFGEL RENVRKLEER LGVSKNLVEH KEVEMKKLEE EKEDALAAQD AAEEALRRVY
101: THQQEDDPLP LESVIAPFEA QIKFQKHQIF ALQEDKKALE RLTKSKESAL LEAERILKSA LERALIVEEV QNHNFELRRQ IEICQEEYKF LEKINRQKVL
201: EIEKLSQTIG ELEEAILAGG TAANAVRDYR RQISQLNASE EKRTLERELA RVKVSASRVA LAFANEWKDE NDRVMPVKQW LEERRLLHGE MQKLKDKLAV
301: SERTAKAESQ LKERLKLRLK TIEDGLKCLN MLSVSPTTTK AEKSGKILGF LTSGGGGSKK RSTSQPRGSL TGRIHALNQP INRGEERDGK ENSKVTSNGV
401: TNVDEEEEEQ QRKAEEDGNE DMVSGFLYDR LQKEVISLRK ICESKEGTIN AKNEEIKMLL KKVHALTKAI EVETKKAKRE AAAREKENAL AILNEESKRC
501: RKANLRRSRV HKPC
101: THQQEDDPLP LESVIAPFEA QIKFQKHQIF ALQEDKKALE RLTKSKESAL LEAERILKSA LERALIVEEV QNHNFELRRQ IEICQEEYKF LEKINRQKVL
201: EIEKLSQTIG ELEEAILAGG TAANAVRDYR RQISQLNASE EKRTLERELA RVKVSASRVA LAFANEWKDE NDRVMPVKQW LEERRLLHGE MQKLKDKLAV
301: SERTAKAESQ LKERLKLRLK TIEDGLKCLN MLSVSPTTTK AEKSGKILGF LTSGGGGSKK RSTSQPRGSL TGRIHALNQP INRGEERDGK ENSKVTSNGV
401: TNVDEEEEEQ QRKAEEDGNE DMVSGFLYDR LQKEVISLRK ICESKEGTIN AKNEEIKMLL KKVHALTKAI EVETKKAKRE AAAREKENAL AILNEESKRC
501: RKANLRRSRV HKPC
001: MTAAENPFVS DTSSLQSQLK EKEKELLAAK AEVEALRTNE ELKDRVFKEL RENVRKLEEK LGATENQVDQ KELERKKLEE EKEDALAAQD AAEEALRRVY
101: THQQDDDSLP LESIIAPLES QIKIHKHEIS ALQEDKKALE RLTKSKESAL LEAERILRSA LERALIVEEV QNHNFELRRQ IEICQDENKF LEKINRQKVL
201: EIEKLSQSIV ELEEAILAGG TAANAVRDYR RQISQLNDEK RTLERELARV KVSASRVALA VANEWKDEND RVMPVKQWLE ERRILHGEMQ KLKDKLAVSE
301: RTAKAESQLK ERLKLRLKTI EDGLKGPNTF FVSPTTKTEK SGKILGFLTS GGGSKKRSSS QLRGSVTGRI HAMNQPIDRV GESDEMENSK ITANGLTDQH
401: EEDSERKTEE DGNVYSEDMV SGFLYDRLQK EVIALRKLCE SKEGTINAKN EEIKMLLKKV DALTKAIEVE TKKAKREAAA REKENALAML NEESKLCRKA
501: KLPRSRIPNP RCQ
101: THQQDDDSLP LESIIAPLES QIKIHKHEIS ALQEDKKALE RLTKSKESAL LEAERILRSA LERALIVEEV QNHNFELRRQ IEICQDENKF LEKINRQKVL
201: EIEKLSQSIV ELEEAILAGG TAANAVRDYR RQISQLNDEK RTLERELARV KVSASRVALA VANEWKDEND RVMPVKQWLE ERRILHGEMQ KLKDKLAVSE
301: RTAKAESQLK ERLKLRLKTI EDGLKGPNTF FVSPTTKTEK SGKILGFLTS GGGSKKRSSS QLRGSVTGRI HAMNQPIDRV GESDEMENSK ITANGLTDQH
401: EEDSERKTEE DGNVYSEDMV SGFLYDRLQK EVIALRKLCE SKEGTINAKN EEIKMLLKKV DALTKAIEVE TKKAKREAAA REKENALAML NEESKLCRKA
501: KLPRSRIPNP RCQ
Arabidopsis Description
MAP70.5Microtubule-associated protein 70-5 [Source:UniProtKB/Swiss-Prot;Acc:Q8GYX3]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.