Factsheet for GSMUA_Achr7P26720_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	nucleus

PPI

Inferred distinct locusB in Crop

locusB	locations
GSMUA_Achr10P...
GSMUA_Achr10P...
GSMUA_Achr1P22980_001
GSMUA_Achr1P22990_001
GSMUA_Achr4P20870_001
GSMUA_Achr4P22090_001
GSMUA_Achr4P33210_001
GSMUA_Achr5P14740_001
GSMUA_Achr6P06320_001
GSMUA_Achr6P08260_001
GSMUA_Achr6P16290_001
GSMUA_Achr7P00390_001
GSMUA_Achr7P01890_001
GSMUA_Achr7P08450_001
GSMUA_Achr7P11350_001
GSMUA_Achr8P18570_001
GSMUA_Achr9P23190_001
GSMUA_AchrUn_...

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT4G17220.1	GSMUA_Achr10P...	AT1G03140.1	21798944
AT4G17220.1	GSMUA_Achr1P22980_001	AT1G03140.1	21798944
AT4G17220.1	GSMUA_Achr1P22990_001	AT1G03140.1	21798944
AT4G17220.1	GSMUA_Achr4P33210_001	AT1G30860.1	21798944
AT4G17220.1	GSMUA_Achr7P00390_001	AT1G30860.1	21798944
AT4G17220.1	GSMUA_Achr4P20870_001	AT2G22680.1	21798944
AT4G17220.1	GSMUA_Achr4P22090_001	AT2G22680.1	21798944
AT4G17220.1	GSMUA_Achr5P14740_001	AT2G22680.1	21798944
AT4G17220.1	GSMUA_Achr7P01890_001	AT2G22680.1	21798944
AT4G17220.1	GSMUA_Achr6P06320_001	AT2G32840.1	21798944
AT4G17220.1	GSMUA_Achr7P11350_001	AT2G32840.1	21798944
AT4G17220.1	GSMUA_Achr6P08260_001	AT3G11590.1	21798944
AT4G17220.1	GSMUA_Achr6P16290_001	AT3G11590.1	21798944
AT4G17220.1	GSMUA_AchrUn_...	AT4G32190.1	21798944
AT4G17220.1	GSMUA_Achr10P...	AT5G19960.1	21798944
AT4G17220.1	GSMUA_Achr7P08450_001	AT5G19960.1	21798944
AT4G17220.1	GSMUA_Achr8P18570_001	AT5G52010.1	21798944
AT4G17220.1	GSMUA_Achr9P23190_001	AT5G61230.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400034592	Potato	cytosol	32.62	63.88
Solyc04g015010.2.1	Tomato	cytosol	47.77	50.51
PGSC0003DMT400038827	Potato	cytosol	48.16	49.11
KRH36588	Soybean	cytosol	52.62	47.46
KRH11576	Soybean	cytosol	52.62	47.46
VIT_00s0194g00260.t01	Wine grape	cytosol	53.79	47.43
KRH51187	Soybean	cytosol	51.84	46.6
AT4G17220.1	Thale cress	cytosol	46.41	46.59
KRH01966	Soybean	mitochondrion	50.49	46.1
Solyc11g012660.1.1	Tomato	nucleus	49.9	45.89
CDY35590	Canola	cytosol	45.63	45.72
CDY42967	Canola	cytosol, nucleus, plasma membrane	44.27	45.6
CDX90483	Canola	cytosol	44.47	45.53
Bra026236.1-P	Field mustard	cytosol	43.69	45.27
CDY09638	Canola	cytosol	44.08	45.13
Os03t0215700-01	Rice	cytosol	43.88	43.88
EER95273	Sorghum	cytosol	42.91	43.25
Zm00001d028219_P001	Maize	cytosol	42.52	42.86
GSMUA_Achr11P...	Banana	cytosol	41.75	42.83
TraesCS4B01G245400.1	Wheat	nucleus	42.72	41.43
HORVU4Hr1G067630.12	Barley	nucleus	42.14	41.33
TraesCS4A01G078900.2	Wheat	nucleus	42.14	40.87
GSMUA_Achr10P...	Banana	cytosol	48.16	39.94
GSMUA_Achr6P11260_001	Banana	cytosol	47.57	39.45
TraesCS4D01G244000.1	Wheat	nucleus	40.39	39.17
GSMUA_Achr2P21620_001	Banana	cytosol	46.99	38.97
GSMUA_Achr11P...	Banana	cytosol	45.24	38.32
GSMUA_Achr9P15920_001	Banana	mitochondrion, nucleus	47.38	33.61
GSMUA_Achr11P...	Banana	cytosol	5.63	21.97

Protein Annotations

EnsemblPlants:GSMUA_Achr7P26720_001	EnsemblPlants:GSMUA_Achr7T26720_001	EnsemblPlantsGene:GSMUA_Achr7G26720_001	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
GO:GO:0007010	GO:GO:0007275	GO:GO:0008017	GO:GO:0008150	GO:GO:0009832	GO:GO:0009987
GO:GO:0010051	GO:GO:0016043	InterPro:MAP70	ncoils:Coil	PANTHER:PTHR31246	PANTHER:PTHR31246:SF5
PFAM:PF07058	SEG:seg	UniParc:UPI0002969C05	UniProt:M0TL08	MapMan:35.1	:

Description

ATMAP70 protein, putative, expressed [Source:GMGC_GENE;Acc:GSMUA_Achr7G26720_001]

Coordinates

chr7:+:27961975..27965054

Molecular Weight (calculated)

58622.5 Da

IEP (calculated)

7.165

GRAVY (calculated)

-0.749

Length

515 amino acids

Sequence
(BLAST)

001: MGSLGDALTM EFFPAPSDPV MIELNRLENG LLEKERELGL AKCEIKTLKA TELSKDKAVM ELSNEVKKMD EKLRATEKQL ENKNLEIKKL INEKKEALAA
101: QFSAEAALRR VHATQKDEEL VPVGVLTAPL ESDIRQYKNE IVMLQEDNKA LERLTKSKEA ALVEAEALLQ SALEQAMSVE MVRNKNLELK RQMEICQEEN
201: RTLEKTHRQK VVEVERLTKT ITELEESILA SSVTANAIRD CQRQISELNE EKRMVERELA RVKVSASRMA TVAANEWKDD NDKVIPVKQW LEERRFLQGE
301: IQRLRDKLAL AERTAKAERQ LKDKLSLRLK TVEECLKPSG LPEKHGELPG GKKYGNLSAP RSRSFSDSEK ENAETNVKPN GHVDDDVVTG KTELTHEVNA
401: KECGHIKSEM KRLGVDCEDM VSGFLYDRLQ KEVLNLRGSQ KDKESLLSAK DDEIKMLQKK VDVLTKAVEM ELKKTRRNAV ARERKMLAKP EDNKHNTDIS
501: ERYVRQLEVS KGSTA

Best Arabidopsis Sequence Match ( AT4G17220.1 )
(BLAST)

001: MTAAENPFVS DTSSLQSQLK EKEKELLAAK AEVEALRTNE ELKDRVFKEL RENVRKLEEK LGATENQVDQ KELERKKLEE EKEDALAAQD AAEEALRRVY
101: THQQDDDSLP LESIIAPLES QIKIHKHEIS ALQEDKKALE RLTKSKESAL LEAERILRSA LERALIVEEV QNHNFELRRQ IEICQDENKF LEKINRQKVL
201: EIEKLSQSIV ELEEAILAGG TAANAVRDYR RQISQLNDEK RTLERELARV KVSASRVALA VANEWKDEND RVMPVKQWLE ERRILHGEMQ KLKDKLAVSE
301: RTAKAESQLK ERLKLRLKTI EDGLKGPNTF FVSPTTKTEK SGKILGFLTS GGGSKKRSSS QLRGSVTGRI HAMNQPIDRV GESDEMENSK ITANGLTDQH
401: EEDSERKTEE DGNVYSEDMV SGFLYDRLQK EVIALRKLCE SKEGTINAKN EEIKMLLKKV DALTKAIEVE TKKAKREAAA REKENALAML NEESKLCRKA
501: KLPRSRIPNP RCQ

Arabidopsis Description

MAP70.5Microtubule-associated protein 70-5 [Source:UniProtKB/Swiss-Prot;Acc:Q8GYX3]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.