Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX90483 | Canola | cytosol | 96.22 | 96.22 |
| CDY35590 | Canola | cytosol | 82.7 | 80.93 |
| CDY42967 | Canola | cytosol, nucleus, plasma membrane | 80.12 | 80.6 |
| AT4G17220.1 | Thale cress | cytosol | 81.31 | 79.73 |
| PGSC0003DMT400034592 | Potato | cytosol | 34.79 | 66.54 |
| Solyc04g015010.2.1 | Tomato | cytosol | 51.89 | 53.59 |
| PGSC0003DMT400038827 | Potato | cytosol | 51.89 | 51.68 |
| Solyc11g012660.1.1 | Tomato | nucleus | 54.87 | 49.29 |
| KRH11576 | Soybean | cytosol | 55.86 | 49.21 |
| VIT_00s0194g00260.t01 | Wine grape | cytosol | 56.86 | 48.97 |
| KRH36588 | Soybean | cytosol | 55.27 | 48.69 |
| KRH01966 | Soybean | mitochondrion | 52.09 | 46.45 |
| KRH51187 | Soybean | cytosol | 52.68 | 46.25 |
| GSMUA_Achr7P26720_001 | Banana | cytosol | 45.13 | 44.08 |
| CDX84971 | Canola | cytosol | 46.12 | 37.72 |
| CDX84402 | Canola | cytosol | 4.57 | 37.7 |
| CDX81676 | Canola | plastid | 44.14 | 37.5 |
| CDY36126 | Canola | nucleus | 45.92 | 37.44 |
| CDY07403 | Canola | nucleus, plastid | 45.73 | 37.22 |
| CDY40783 | Canola | plastid | 45.33 | 37.19 |
| CDY04200 | Canola | plastid | 45.53 | 37.12 |
| CDY45293 | Canola | nucleus | 44.33 | 37.1 |
| CDX95376 | Canola | cytosol | 4.57 | 37.1 |
| CDY27573 | Canola | nucleus, plastid | 46.12 | 37.06 |
| EER95273 | Sorghum | cytosol | 37.57 | 36.99 |
| CDY36256 | Canola | nucleus, plastid | 45.73 | 36.98 |
| CDX96050 | Canola | nucleus, plastid | 45.92 | 36.96 |
| Os03t0215700-01 | Rice | cytosol | 37.77 | 36.89 |
| CDY51769 | Canola | nucleus | 44.14 | 36.88 |
| CDY01879 | Canola | nucleus | 45.73 | 36.86 |
| CDY17639 | Canola | nucleus, plastid | 45.53 | 36.76 |
| CDY33736 | Canola | nucleus | 44.14 | 36.69 |
| Zm00001d028219_P001 | Maize | cytosol | 37.18 | 36.59 |
| CDY03865 | Canola | nucleus | 44.14 | 36.04 |
| TraesCS4A01G078900.2 | Wheat | nucleus | 37.57 | 35.59 |
| HORVU4Hr1G067630.12 | Barley | nucleus | 36.78 | 35.24 |
| TraesCS4D01G244000.1 | Wheat | nucleus | 37.18 | 35.22 |
| TraesCS4B01G245400.1 | Wheat | nucleus | 36.98 | 35.03 |
| CDX95377 | Canola | cytosol | 4.17 | 33.33 |
| CDY24415 | Canola | nucleus | 13.72 | 27.06 |
Protein Annotations
| MapMan:35.1 | GO:A0A078FC97 | UniProt:A0A078FC97 | EnsemblPlants:CDY09638 | ProteinID:CDY09638 | ProteinID:CDY09638.1 |
| ncoils:Coil | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0007010 | GO:GO:0008017 |
| GO:GO:0008150 | GO:GO:0009987 | GO:GO:0016043 | EnsemblPlantsGene:GSBRNA2T00031283001 | InterPro:MAP70 | PFAM:PF07058 |
| PANTHER:PTHR31246 | PANTHER:PTHR31246:SF5 | UniParc:UPI0004EE93C0 | SEG:seg | : | : |
Description
BnaC07g34230DBnaC07g34230D protein [Source:UniProtKB/TrEMBL;Acc:A0A078FC97]
Coordinates
chrLK031998:+:138533..140861
Molecular Weight (calculated)
56981.9 Da
IEP (calculated)
9.177
GRAVY (calculated)
-0.819
Length
503 amino acids
Sequence
(BLAST)
(BLAST)
001: MTAGENPFAS NTSSLQSQLK EKDKELLAAK AEIEALRTNE ELKNRAFEEL TENVRKWEER LGQKVHCVME EQEVEMKKLE EEKEDALAAQ EAAEEALRRV
101: YTHEHEDDSL PLESVIAPLE AQIKFQKHQI SALQEDKKAL ERLTKSKESA LLEAERILKS ALERALIVEE VQNHNFELRR QIEIFQEEYK FLEKINRQKV
201: LEIEKLSQTI GELEEAILAG GTAANAVRDY RRQISQLNAK KRTLERELAR VKVSASRVAL AVANEWKDEN DRVMPVKQWL EERRLLHGEM QKLKDKLGVS
301: ERTAKAESQL KERLKLRLKT IEDGLKSSPN TFSISTTTTK TEKSGKILGF LTSGGGGGSK KRSSSQPRGS VTGRIHALNQ PTNRAAETDG KENSKISANG
401: LSDQDAKGED MVSGFLYDRL QKEVIALRKV CESKEGTINA KNEEIKMLLK KVDALTKAIE VETKKAKREA AAREKENTLA LLNEEPKQCR KANLPRSRVH
501: NSR
101: YTHEHEDDSL PLESVIAPLE AQIKFQKHQI SALQEDKKAL ERLTKSKESA LLEAERILKS ALERALIVEE VQNHNFELRR QIEIFQEEYK FLEKINRQKV
201: LEIEKLSQTI GELEEAILAG GTAANAVRDY RRQISQLNAK KRTLERELAR VKVSASRVAL AVANEWKDEN DRVMPVKQWL EERRLLHGEM QKLKDKLGVS
301: ERTAKAESQL KERLKLRLKT IEDGLKSSPN TFSISTTTTK TEKSGKILGF LTSGGGGGSK KRSSSQPRGS VTGRIHALNQ PTNRAAETDG KENSKISANG
401: LSDQDAKGED MVSGFLYDRL QKEVIALRKV CESKEGTINA KNEEIKMLLK KVDALTKAIE VETKKAKREA AAREKENTLA LLNEEPKQCR KANLPRSRVH
501: NSR
001: MTAAENPFVS DTSSLQSQLK EKEKELLAAK AEVEALRTNE ELKDRVFKEL RENVRKLEEK LGATENQVDQ KELERKKLEE EKEDALAAQD AAEEALRRVY
101: THQQDDDSLP LESIIAPLES QIKIHKHEIS ALQEDKKALE RLTKSKESAL LEAERILRSA LERALIVEEV QNHNFELRRQ IEICQDENKF LEKINRQKVL
201: EIEKLSQSIV ELEEAILAGG TAANAVRDYR RQISQLNDEK RTLERELARV KVSASRVALA VANEWKDEND RVMPVKQWLE ERRILHGEMQ KLKDKLAVSE
301: RTAKAESQLK ERLKLRLKTI EDGLKGPNTF FVSPTTKTEK SGKILGFLTS GGGSKKRSSS QLRGSVTGRI HAMNQPIDRV GESDEMENSK ITANGLTDQH
401: EEDSERKTEE DGNVYSEDMV SGFLYDRLQK EVIALRKLCE SKEGTINAKN EEIKMLLKKV DALTKAIEVE TKKAKREAAA REKENALAML NEESKLCRKA
501: KLPRSRIPNP RCQ
101: THQQDDDSLP LESIIAPLES QIKIHKHEIS ALQEDKKALE RLTKSKESAL LEAERILRSA LERALIVEEV QNHNFELRRQ IEICQDENKF LEKINRQKVL
201: EIEKLSQSIV ELEEAILAGG TAANAVRDYR RQISQLNDEK RTLERELARV KVSASRVALA VANEWKDEND RVMPVKQWLE ERRILHGEMQ KLKDKLAVSE
301: RTAKAESQLK ERLKLRLKTI EDGLKGPNTF FVSPTTKTEK SGKILGFLTS GGGSKKRSSS QLRGSVTGRI HAMNQPIDRV GESDEMENSK ITANGLTDQH
401: EEDSERKTEE DGNVYSEDMV SGFLYDRLQK EVIALRKLCE SKEGTINAKN EEIKMLLKKV DALTKAIEVE TKKAKREAAA REKENALAML NEESKLCRKA
501: KLPRSRIPNP RCQ
Arabidopsis Description
MAP70.5Microtubule-associated protein 70-5 [Source:UniProtKB/Swiss-Prot;Acc:Q8GYX3]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.