CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX84402	Canola	cytosol	69.84	72.13
TraesCS2D01G554500.1	Wheat	cytosol	57.14	9.63
CDY04200	Canola	plastid	80.95	8.27
CDY07403	Canola	nucleus, plastid	79.37	8.09
CDX96050	Canola	nucleus, plastid	79.37	8.0
CDY01879	Canola	nucleus	77.78	7.85
CDY40783	Canola	plastid	74.6	7.67
CDX84971	Canola	cytosol	73.02	7.48
CDY27573	Canola	nucleus, plastid	73.02	7.35
CDY03865	Canola	nucleus	71.43	7.31
CDY36126	Canola	nucleus	69.84	7.13
Os12t0640900-01	Rice	nucleus	61.9	6.88
CDX81676	Canola	plastid	61.9	6.59
CDY45293	Canola	nucleus	61.9	6.49
CDY51769	Canola	nucleus	61.9	6.48
CDY33736	Canola	nucleus	61.9	6.45
CDY17639	Canola	nucleus, plastid	63.49	6.42
TraesCS5D01G000100.1	Wheat	cytosol	58.73	6.4
TraesCS5B01G000600.2	Wheat	cytosol	58.73	6.37
CDY36256	Canola	nucleus, plastid	61.9	6.27
KXG24157	Sorghum	nucleus	57.14	6.25
HORVU5Hr1G000150.1	Barley	cytosol, mitochondrion	58.73	6.2
CDY42967	Canola	cytosol, nucleus, plasma membrane	33.33	4.2
CDY09638	Canola	cytosol	33.33	4.17
CDY35590	Canola	cytosol	33.33	4.09
CDX90483	Canola	cytosol	31.75	3.98
CDY24415	Canola	nucleus	4.76	1.18
CDX95376	Canola	cytosol	0.0	0.0

Protein Annotations

EnsemblPlants:CDX95377	EnsemblPlantsGene:GSBRNA2T00101087001	GO:A0A078E2K5	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
GO:GO:0007010	GO:GO:0008017	GO:GO:0008150	GO:GO:0009987	GO:GO:0016043	InterPro:MAP70
ncoils:Coil	PANTHER:PTHR31246	PANTHER:PTHR31246:SF4	PFAM:PF07058	ProteinID:CDX95377	ProteinID:CDX95377.1
SEG:seg	UniParc:UPI0004EEF5E4	MapMan:35.2	:	:	:

Description

BnaC04g27810D

Coordinates

chrLK031888:-:813937..814498

Molecular Weight (calculated)

7282.8 Da

IEP (calculated)

5.734

GRAVY (calculated)

-0.749

Length

63 amino acids

Sequence
(BLAST)

1: MVGFSHKDRE LGEAHTEIRA LRLSERQREK AVEELTNELT KLEEKLKLTE SLLQGKVIIE NPP

Best Arabidopsis Sequence Match ( AT1G24764.1 )
(BLAST)

001: MSDVSGDGDL SATVTEHEVT PQPPVSSATY PSLTVSASYK ESSGGKSSSK RRPIRPSFDA AADNEFITLL HGSDPVKVEL NRLENEVRDK DRELGEANAE
101: IKALRLSERQ REKAVEELTE ELTKLDEKLK LTESILESKN LEIKKINEEK KASMAAQFAA EATLRRVHAA QKDDDMPPIE AILAPLEAEL KLARSEIGKL
201: QEDNRALDRL TKSKEAALLE AERTVEAAMA KAAMVDDLQN KNQELMKQIE ICQEENKILD RMHRQKVAEV EKLTQTVREL EEAVLAGGAA ANAVRDYQRK
301: FQEMNEERKT LDRELARAKV TANRVATVVA NEWKDGNDKV MPVKQWLEER RFLQGEMQQL RDKLAITDRA AKSEAQLKEK FQLRLKVLEE TLRGTSSSAT
401: RNTPEARSMS NGPSRRQSLG GAENLQKFTS NGALSKKAPA SQMRHSLSIN STSVLKNAKG TSKSFDGGTR SVDRGKALLN GPGNYSFNKA TDDSKEAESG
501: NGWKENSEEK PQSEDPEAAT EDSVPGVLYD LLQKEVVSLR KASNEKDQSL KDKDDAIEML AKKVETLTKA MEVEAKKMRR EVAAMEKEVA AMRVEKDQDA
601: RAKRFSNSKS PSNTAQILAG RAAGRSGGLT KSTQ

Arabidopsis Description

ATMAP70-2microtubule-associated proteins 70-2 [Source:TAIR;Acc:AT1G24764]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.