CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
plastid 1
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus, plastid
BaCelLo:	nucleus
ChloroP:	plastid
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY27573	Canola	nucleus, plastid	96.75	95.05
CDY40783	Canola	plastid	90.73	91.03
CDY03865	Canola	nucleus	88.78	88.64
CDX84402	Canola	cytosol	8.62	86.89
CDY36126	Canola	nucleus	85.69	85.41
CDY07403	Canola	nucleus, plastid	85.53	85.11
CDY04200	Canola	plastid	83.9	83.63
CDX96050	Canola	nucleus, plastid	84.88	83.52
CDY01879	Canola	nucleus	83.9	82.69
KRH49658	Soybean	cytosol	76.26	76.76
KRH70354	Soybean	endoplasmic reticulum	75.94	76.31
VIT_01s0011g05790.t01	Wine grape	cytosol	78.21	75.51
Solyc04g008040.2.1	Tomato	nucleus	75.12	74.88
PGSC0003DMT400075913	Potato	cytosol	74.96	74.72
KRH60419	Soybean	cytosol, plastid	74.8	74.68
KRH41720	Soybean	cytosol	74.63	74.51
Solyc01g005330.2.1	Tomato	cytosol	74.63	73.79
PGSC0003DMT400051425	Potato	cytosol, nucleus, plasma membrane	74.63	73.56
CDX95377	Canola	cytosol	7.48	73.02
CDY24415	Canola	nucleus	30.24	72.94
CDX81676	Canola	plastid	69.92	72.64
CDX95376	Canola	cytosol	7.32	72.58
CDY33736	Canola	nucleus	71.22	72.4
CDY45293	Canola	nucleus	70.73	72.38
PGSC0003DMT400056068	Potato	cytosol	73.01	72.19
CDY51769	Canola	nucleus	70.57	72.09
TraesCS6D01G278500.1	Wheat	cytosol	69.92	71.79
Solyc05g017980.2.1	Tomato	cytosol	72.36	71.54
Os02t0736100-01	Rice	cytosol	69.59	71.45
TraesCS6B01G328200.1	Wheat	cytosol	66.67	71.3
CDY17639	Canola	nucleus, plastid	71.87	70.95
TraesCS6A01G298800.1	Wheat	cytosol	68.94	70.78
CDY36256	Canola	nucleus, plastid	70.89	70.1
TraesCS7D01G204000.1	Wheat	nucleus	68.13	69.03
EES07297	Sorghum	cytosol	66.18	68.98
TraesCS7B01G107500.1	Wheat	nucleus	67.97	68.86
TraesCS7A01G200700.1	Wheat	nucleus	67.97	68.86
EER89530	Sorghum	nucleus	67.32	68.32
Os06t0251700-01	Rice	nucleus	66.99	67.76
Zm00001d037291_P001	Maize	nucleus	66.67	67.66
Zm00001d017961_P003	Maize	cytosol	64.88	67.63
HORVU7Hr1G041170.1	Barley	nucleus	67.64	67.1
Zm00001d044724_P001	Maize	cytosol	66.02	67.0
HORVU0Hr1G017080.1	Barley	nucleus, plastid	70.08	63.95
CDY35590	Canola	cytosol	39.35	47.08
CDX90483	Canola	cytosol	38.05	46.52
CDY42967	Canola	cytosol, nucleus, plasma membrane	37.72	46.4
CDY09638	Canola	cytosol	37.72	46.12

Protein Annotations

EnsemblPlants:CDX84971	EnsemblPlantsGene:GSBRNA2T00142362001	GO:A0A078D6N3	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
GO:GO:0007010	GO:GO:0008017	GO:GO:0008150	GO:GO:0009987	GO:GO:0016043	InterPro:MAP70
ncoils:Coil	PANTHER:PTHR31246	PANTHER:PTHR31246:SF2	PFAM:PF07058	ProteinID:CDX84971	ProteinID:CDX84971.1
SEG:seg	UniParc:UPI0004EDF262	MapMan:35.1	:	:	:

Description

BnaC05g20840D

Coordinates

chrLK031839:-:841673..845461

Molecular Weight (calculated)

68043.4 Da

IEP (calculated)

9.402

GRAVY (calculated)

-0.807

Length

615 amino acids

Sequence
(BLAST)

001: MSNVSGDGDV SANATEPTTA SYPSLTVSAS YKESGGGKSS AKRRPIRPSF DAAADNEFIT QLHGSDPVKV ELNRLENEVR DKDRELGEAH AEIKALRLSE
101: RQREKAVEEL TEELAKLDEK LKLTESILQT KNLEIKKINE EKKASMAAQF AAEATLRRVH AAQKDDDMPP IEAILAPLEA ELKLARSEIG KLQEDNRALD
201: RLTKSKEAAL LDAERTIEGA LAKAAMVDDL QNKNQELMKQ IEICQEENKI LDKMHRQKVA EVEKLTQTVR ELEEAVLAGG AAANAVRDYQ RKFQEMNEER
301: KTLDRELARA KVTANRVATV VANEWKDGND KVMPVKQWLE ERRFLQGEMQ QLRDKLAITD RAAKSEAQLK EKFQLRLKVL EETLRGTSSS RNTPEARSMS
401: NGPTSRRQSL GGSDNLQKFP SNGAFSKKAP VSQMRHSLSI NSTSVLKNAK GTSKSFDGGT RSLDRGKALL NGPGNYSFNK PASDDATKEP ELAANGENPA
501: ATEDSVPGVL YDLLQKEVAS LRKASHEKDQ SLKDKDDAIE MLAKKVETLT KAMEVEAKKM RREVSAMEKE VAAMRVEKDQ DNRAKRFSNS KSSSNTAQIL
601: AARAAGRSGL TKSSQ

Best Arabidopsis Sequence Match ( AT1G24764.1 )
(BLAST)

001: MSDVSGDGDL SATVTEHEVT PQPPVSSATY PSLTVSASYK ESSGGKSSSK RRPIRPSFDA AADNEFITLL HGSDPVKVEL NRLENEVRDK DRELGEANAE
101: IKALRLSERQ REKAVEELTE ELTKLDEKLK LTESILESKN LEIKKINEEK KASMAAQFAA EATLRRVHAA QKDDDMPPIE AILAPLEAEL KLARSEIGKL
201: QEDNRALDRL TKSKEAALLE AERTVEAAMA KAAMVDDLQN KNQELMKQIE ICQEENKILD RMHRQKVAEV EKLTQTVREL EEAVLAGGAA ANAVRDYQRK
301: FQEMNEERKT LDRELARAKV TANRVATVVA NEWKDGNDKV MPVKQWLEER RFLQGEMQQL RDKLAITDRA AKSEAQLKEK FQLRLKVLEE TLRGTSSSAT
401: RNTPEARSMS NGPSRRQSLG GAENLQKFTS NGALSKKAPA SQMRHSLSIN STSVLKNAKG TSKSFDGGTR SVDRGKALLN GPGNYSFNKA TDDSKEAESG
501: NGWKENSEEK PQSEDPEAAT EDSVPGVLYD LLQKEVVSLR KASNEKDQSL KDKDDAIEML AKKVETLTKA MEVEAKKMRR EVAAMEKEVA AMRVEKDQDA
601: RAKRFSNSKS PSNTAQILAG RAAGRSGGLT KSTQ

Arabidopsis Description

ATMAP70-2microtubule-associated proteins 70-2 [Source:TAIR;Acc:AT1G24764]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.