CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid, nucleus

Predictor Summary:

nucleus 3
plastid 2
cytosol 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus, plastid
Any Predictor:	cytosol, nucleus, plastid
BaCelLo:	nucleus
ChloroP:	plastid
MultiLoc:	cytosol
PProwler:	mitochondrion
TargetP:	plastid
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra032784.1-P	Field mustard	nucleus	94.73	99.5
CDX84971	Canola	cytosol	95.05	96.75
CDY40783	Canola	plastid	89.14	91.03
CDY03865	Canola	nucleus	87.38	88.8
CDX84402	Canola	cytosol	8.47	86.89
CDY07403	Canola	nucleus, plastid	85.14	86.25
CDY36126	Canola	nucleus	84.5	85.74
CDX96050	Canola	nucleus, plastid	84.34	84.48
CDY04200	Canola	plastid	83.07	84.28
CDY01879	Canola	nucleus	83.39	83.65
KRH49658	Soybean	cytosol	75.24	77.09
KRH70354	Soybean	endoplasmic reticulum	74.92	76.63
VIT_01s0011g05790.t01	Wine grape	cytosol	77.32	75.98
Solyc04g008040.2.1	Tomato	nucleus	74.44	75.53
PGSC0003DMT400075913	Potato	cytosol	74.12	75.2
KRH60419	Soybean	cytosol, plastid	73.8	75.0
KRH41720	Soybean	cytosol	73.64	74.84
Solyc01g005330.2.1	Tomato	cytosol	73.32	73.79
PGSC0003DMT400051425	Potato	cytosol, nucleus, plasma membrane	73.16	73.4
CDY24415	Canola	nucleus	29.87	73.33
CDY45293	Canola	nucleus	70.13	73.04
CDX95377	Canola	cytosol	7.35	73.02
PGSC0003DMT400056068	Potato	cytosol	72.52	72.99
CDY51769	Canola	nucleus	69.97	72.76
CDY33736	Canola	nucleus	70.29	72.73
CDX95376	Canola	cytosol	7.19	72.58
TraesCS6D01G278500.1	Wheat	cytosol	69.33	72.45
CDX81676	Canola	plastid	68.37	72.3
Solyc05g017980.2.1	Tomato	cytosol	71.73	72.19
TraesCS6B01G328200.1	Wheat	cytosol	66.13	72.0
Os02t0736100-01	Rice	cytosol	68.85	71.95
TraesCS6A01G298800.1	Wheat	cytosol	68.37	71.45
CDY17639	Canola	nucleus, plastid	70.93	71.27
CDY36256	Canola	nucleus, plastid	70.29	70.74
EES07297	Sorghum	cytosol	65.66	69.66
TraesCS7D01G204000.1	Wheat	nucleus	67.25	69.36
TraesCS7A01G200700.1	Wheat	nucleus	67.09	69.19
TraesCS7B01G107500.1	Wheat	nucleus	67.09	69.19
EER89530	Sorghum	nucleus	66.29	68.48
Zm00001d017961_P003	Maize	cytosol	64.54	68.47
Os06t0251700-01	Rice	nucleus	66.13	68.09
Zm00001d037291_P001	Maize	nucleus	65.66	67.82
HORVU7Hr1G041170.1	Barley	nucleus	66.93	67.58
Zm00001d044724_P001	Maize	cytosol	65.18	67.33
HORVU0Hr1G017080.1	Barley	nucleus, plastid	69.17	64.24
CDY35590	Canola	cytosol	38.66	47.08
CDY42967	Canola	cytosol, nucleus, plasma membrane	37.22	46.6
CDX90483	Canola	cytosol	37.38	46.52
CDY09638	Canola	cytosol	37.06	46.12

Protein Annotations

EnsemblPlants:CDY27573	EnsemblPlantsGene:GSBRNA2T00038303001	GO:A0A078GSL2	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
GO:GO:0007010	GO:GO:0008017	GO:GO:0008150	GO:GO:0009987	GO:GO:0016043	InterPro:MAP70
ncoils:Coil	PANTHER:PTHR31246	PANTHER:PTHR31246:SF2	PFAM:PF07058	ProteinID:CDY27573	ProteinID:CDY27573.1
SEG:seg	UniParc:UPI0004EDF8D5	UniProt:A0A078GSL2	MapMan:35.1	:	:

Description

BnaA09g28340DBnaA09g28340D protein [Source:UniProtKB/TrEMBL;Acc:A0A078GSL2]

Coordinates

chrLK032207:+:20559..24111

Molecular Weight (calculated)

69348.8 Da

IEP (calculated)

9.059

GRAVY (calculated)

-0.827

Length

626 amino acids

Sequence
(BLAST)

001: MSDVSGDGDV SANATEPATA SYPSLTVSAS FKESGGGGKS SSKRRPIRPS FDAAADNEFI TQLHGSDPVK VELNRLENEV RDKDRELGEA HAEIKALRLS
101: ERQREKAVEE LTEELAKLDE KLKLTESILQ TKNLEIKKIN EEKKASMAAQ FAAEATLRRV HAAQKDDDMP PIEAILAPLE AELKLARSEI GKLQEDNRAL
201: DRLTKSKEAA LLDAERTIEG ALAKAAMVDD LQNKNQELMK QIEICQEENK ILDKMHRQKV AEVEKLTQTV RELEEAVLAG GAAANAVRDY QRKFQEMNEE
301: RKTLDRELAR AKVTANRVAT VVANEWKDGN DKVMPVKQWL EERRFLQGEM QQLRDKLAIT DRAAKSEAQL KEKFQLRLKV LEETLRGTSS RNTPEARSMS
401: NGPTSRRQSL GGSDNLQKFP SNGSFSKKAP VSQMRHSLSI NSTSVLKNAK GTSKSFDGGT RSLDRGKALL NGPGNYSFNK PASDDAAKET ELAANGWKET
501: SEEKPQSENP AATEDSVPGV LYDLLQKEVV SLRKASHEKD QSLKDKDDAI EMLAKKVETL TKAMEVEAKK MRREVSAMEK EVAAMRVEKD QDNRAKRFSN
601: SKSSSNTAQI LASRAAGRSG LTKSSQ

Best Arabidopsis Sequence Match ( AT1G24764.1 )
(BLAST)

001: MSDVSGDGDL SATVTEHEVT PQPPVSSATY PSLTVSASYK ESSGGKSSSK RRPIRPSFDA AADNEFITLL HGSDPVKVEL NRLENEVRDK DRELGEANAE
101: IKALRLSERQ REKAVEELTE ELTKLDEKLK LTESILESKN LEIKKINEEK KASMAAQFAA EATLRRVHAA QKDDDMPPIE AILAPLEAEL KLARSEIGKL
201: QEDNRALDRL TKSKEAALLE AERTVEAAMA KAAMVDDLQN KNQELMKQIE ICQEENKILD RMHRQKVAEV EKLTQTVREL EEAVLAGGAA ANAVRDYQRK
301: FQEMNEERKT LDRELARAKV TANRVATVVA NEWKDGNDKV MPVKQWLEER RFLQGEMQQL RDKLAITDRA AKSEAQLKEK FQLRLKVLEE TLRGTSSSAT
401: RNTPEARSMS NGPSRRQSLG GAENLQKFTS NGALSKKAPA SQMRHSLSIN STSVLKNAKG TSKSFDGGTR SVDRGKALLN GPGNYSFNKA TDDSKEAESG
501: NGWKENSEEK PQSEDPEAAT EDSVPGVLYD LLQKEVVSLR KASNEKDQSL KDKDDAIEML AKKVETLTKA MEVEAKKMRR EVAAMEKEVA AMRVEKDQDA
601: RAKRFSNSKS PSNTAQILAG RAAGRSGGLT KSTQ

Arabidopsis Description

ATMAP70-2microtubule-associated proteins 70-2 [Source:TAIR;Acc:AT1G24764]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.