Factsheet for Zm00001d017961_P003

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2
mitochondrion 1
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	nucleus

PPI

Inferred distinct locusB in Crop

locusB	locations
Zm00001d029847_P001
Zm00001d043365_P001

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G68060.1	Zm00001d029847_P001	AT2G45920.1	21798944
AT1G68060.1	Zm00001d043365_P001	AT5G61010.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EES07297	Sorghum	cytosol	96.27	96.27
TraesCS6B01G328200.1	Wheat	cytosol	82.03	84.17
Os02t0736100-01	Rice	cytosol	85.08	83.81
TraesCS6A01G298800.1	Wheat	cytosol	84.41	83.14
TraesCS6D01G278500.1	Wheat	cytosol	82.88	81.64
Zm00001d044724_P001	Maize	cytosol	77.8	75.74
Zm00001d037291_P001	Maize	nucleus	77.29	75.25
HORVU0Hr1G017080.1	Barley	nucleus, plastid	81.19	71.07
KRH49658	Soybean	cytosol	72.37	69.89
KRH70354	Soybean	endoplasmic reticulum	72.37	69.77
KRH60419	Soybean	cytosol, plastid	71.86	68.83
KRH41720	Soybean	cytosol	71.53	68.51
VIT_01s0011g05790.t01	Wine grape	cytosol	73.22	67.82
PGSC0003DMT400056068	Potato	cytosol	70.34	66.72
Solyc05g017980.2.1	Tomato	cytosol	70.17	66.56
Solyc01g005330.2.1	Tomato	cytosol	70.17	66.56
Solyc04g008040.2.1	Tomato	nucleus	69.49	66.45
PGSC0003DMT400075913	Potato	cytosol	69.49	66.45
PGSC0003DMT400051425	Potato	cytosol, nucleus, plasma membrane	69.83	66.03
CDX84971	Canola	cytosol	67.63	64.88
CDY04200	Canola	plastid	67.63	64.67
CDY40783	Canola	plastid	67.12	64.6
CDY27573	Canola	nucleus, plastid	68.47	64.54
CDX96050	Canola	nucleus, plastid	68.14	64.32
Bra004279.1-P	Field mustard	nucleus, plastid	68.14	64.32
Bra012493.1-P	Field mustard	nucleus	66.78	64.27
CDY07403	Canola	nucleus, plastid	67.29	64.24
Bra004053.1-P	Field mustard	nucleus, plastid	67.29	64.24
AT1G68060.1	Thale cress	nucleus, plastid	67.63	64.15
AT1G14840.1	Thale cress	plastid	65.59	64.07
CDY01879	Canola	nucleus	67.63	63.94
CDX81676	Canola	plastid	64.07	63.85
Bra010978.1-P	Field mustard	nucleus	66.1	63.83
CDY03865	Canola	nucleus	66.27	63.47
CDY36126	Canola	nucleus	66.27	63.37
Bra026800.1-P	Field mustard	nucleus	64.41	63.23
Bra032784.1-P	Field mustard	nucleus	63.73	63.09
Bra024854.1-P	Field mustard	nucleus, plastid	66.61	62.38
CDY36256	Canola	nucleus, plastid	65.76	62.38
CDY51769	Canola	nucleus	63.56	62.29
Bra025859.1-P	Field mustard	nucleus	47.8	62.25
Bra026184.1-P	Field mustard	nucleus	62.88	62.25
CDY45293	Canola	nucleus	63.39	62.23
CDY33736	Canola	nucleus	63.73	62.15
AT2G01750.2	Thale cress	nucleus	66.27	62.06
CDY17639	Canola	nucleus, plastid	65.42	61.96
AT1G24764.3	Thale cress	endoplasmic reticulum, extracellular	68.98	58.73
CDY24415	Canola	nucleus	20.0	46.27
Zm00001d028219_P001	Maize	cytosol	34.41	39.73

Protein Annotations

EnsemblPlants:Zm00001d017961_P003	EnsemblPlants:Zm00001d017961_T003	EnsemblPlantsGene:Zm00001d017961	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
GO:GO:0007010	GO:GO:0008017	GO:GO:0008150	GO:GO:0009987	GO:GO:0016043	InterPro:MAP70
ncoils:Coil	PANTHER:PTHR31246	PANTHER:PTHR31246:SF4	PFAM:PF07058	ProteinID:AQK74653.1	SEG:seg
UniParc:UPI000220E326	UniProt:A0A1D6HJK7	MapMan:35.1	:	:	:

Description

Microtubule-associated protein 70-1

Coordinates

chr5:+:210933744..210939753

Molecular Weight (calculated)

65588.2 Da

IEP (calculated)

8.383

GRAVY (calculated)

-0.765

Length

590 amino acids

Sequence
(BLAST)

001: MADGGGEEGN ASAHKGSARR RGPVQAGLDA DDLLTLMHGS DPVKVELNRL ENEVRDKDRE LGEAHAEIKA LRLSERAREK AVEELTAELE KVDEKLKLTE
101: SLLESKNLEL KKTNDEKKAA MAAQFAAEAT LRRVHGAQKD DDMPPIEAIL APLEAELKLC RKEIAKLQDD NRALDRLTKQ KEAALLEAER TVQIAMAKAA
201: MVDDMQNKNQ ELMKQIEICQ EENKILDRLH RQKVAEVEKL SQTVRELEED VLQGGAAANV VRDYQRKVQE MNEEKKIRDR ELARAKVTAN RVAVVVANEW
301: KDANDKVMPV KQWLEERRFL QGEMQQLRDK LAIAERTARS EAQLKEKYQL RLKVLEDGLR GTPSGSCRPS MEGKCISNGP PRRLSLGGAD SISKISPNGV
401: LMRRSPSFNS RSPLSTSSCL VLKHAGRTSK SFDGGTRSLD QGKVLGSGPH SLNRSTDAVR DCETADSWKA NAEEKSNETA NNDSADMVSG VLYDVLQKEV
501: VSLRKACHEK DQTLKDKEDA MEMLAKKVDT LHKAKEVEAK KKRQEIAALE KKFAAVCLEQ ERLGNLRGPG TSQTVSGRTA SRGGLTRNLQ

Best Arabidopsis Sequence Match ( AT1G24764.1 )
(BLAST)

001: MSDVSGDGDL SATVTEHEVT PQPPVSSATY PSLTVSASYK ESSGGKSSSK RRPIRPSFDA AADNEFITLL HGSDPVKVEL NRLENEVRDK DRELGEANAE
101: IKALRLSERQ REKAVEELTE ELTKLDEKLK LTESILESKN LEIKKINEEK KASMAAQFAA EATLRRVHAA QKDDDMPPIE AILAPLEAEL KLARSEIGKL
201: QEDNRALDRL TKSKEAALLE AERTVEAAMA KAAMVDDLQN KNQELMKQIE ICQEENKILD RMHRQKVAEV EKLTQTVREL EEAVLAGGAA ANAVRDYQRK
301: FQEMNEERKT LDRELARAKV TANRVATVVA NEWKDGNDKV MPVKQWLEER RFLQGEMQQL RDKLAITDRA AKSEAQLKEK FQLRLKVLEE TLRGTSSSAT
401: RNTPEARSMS NGPSRRQSLG GAENLQKFTS NGALSKKAPA SQMRHSLSIN STSVLKNAKG TSKSFDGGTR SVDRGKALLN GPGNYSFNKA TDDSKEAESG
501: NGWKENSEEK PQSEDPEAAT EDSVPGVLYD LLQKEVVSLR KASNEKDQSL KDKDDAIEML AKKVETLTKA MEVEAKKMRR EVAAMEKEVA AMRVEKDQDA
601: RAKRFSNSKS PSNTAQILAG RAAGRSGGLT KSTQ

Arabidopsis Description

ATMAP70-2microtubule-associated proteins 70-2 [Source:TAIR;Acc:AT1G24764]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.