CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

nucleus 2
plastid 3
cytosol 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, nucleus, plastid
BaCelLo:	nucleus
iPSORT:	plastid
MultiLoc:	cytosol
PProwler:	mitochondrion
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY33736	Canola	nucleus	88.51	86.61
CDY51769	Canola	nucleus	87.67	86.21
CDY45293	Canola	nucleus	87.5	86.19
AT1G14840.1	Thale cress	plastid	86.49	84.77
CDY36256	Canola	nucleus, plastid	75.84	72.19
CDX84402	Canola	cytosol	7.43	72.13
CDY17639	Canola	nucleus, plastid	75.68	71.91
KRH49658	Soybean	cytosol	73.99	71.69
KRH70354	Soybean	endoplasmic reticulum	73.14	70.75
KRH41720	Soybean	cytosol	73.14	70.29
KRH60419	Soybean	cytosol, plastid	72.97	70.13
CDX84971	Canola	cytosol	72.64	69.92
CDY04200	Canola	plastid	72.8	69.85
CDY07403	Canola	nucleus, plastid	72.8	69.74
CDY40783	Canola	plastid	71.79	69.33
CDX96050	Canola	nucleus, plastid	72.97	69.12
PGSC0003DMT400075913	Potato	cytosol	71.79	68.88
Solyc04g008040.2.1	Tomato	nucleus	71.79	68.88
CDY03865	Canola	nucleus	71.28	68.51
CDY27573	Canola	nucleus, plastid	72.3	68.37
PGSC0003DMT400051425	Potato	cytosol, nucleus, plasma membrane	71.62	67.95
CDY01879	Canola	nucleus	71.62	67.95
Solyc01g005330.2.1	Tomato	cytosol	71.28	67.85
CDX95376	Canola	cytosol	7.09	67.74
Solyc05g017980.2.1	Tomato	cytosol	71.11	67.68
PGSC0003DMT400056068	Potato	cytosol	71.11	67.68
Os02t0736100-01	Rice	cytosol	68.24	67.45
VIT_01s0011g05790.t01	Wine grape	cytosol	72.47	67.35
CDY36126	Canola	nucleus	69.93	67.1
TraesCS6D01G278500.1	Wheat	cytosol	67.06	66.28
TraesCS6B01G328200.1	Wheat	cytosol	64.19	66.09
TraesCS6A01G298800.1	Wheat	cytosol	66.22	65.44
EES07297	Sorghum	cytosol	64.86	65.08
TraesCS7D01G204000.1	Wheat	nucleus	66.55	64.91
Os06t0251700-01	Rice	nucleus	66.55	64.8
TraesCS7A01G200700.1	Wheat	nucleus	66.39	64.74
TraesCS7B01G107500.1	Wheat	nucleus	66.39	64.74
EER89530	Sorghum	nucleus	65.88	64.36
Zm00001d017961_P003	Maize	cytosol	63.85	64.07
Zm00001d037291_P001	Maize	nucleus	65.03	63.53
Zm00001d044724_P001	Maize	cytosol	64.86	63.37
HORVU7Hr1G041170.1	Barley	nucleus	65.88	62.9
CDX95377	Canola	cytosol	6.59	61.9
HORVU0Hr1G017080.1	Barley	nucleus, plastid	66.72	58.61
CDY24415	Canola	nucleus	22.97	53.33
CDY42967	Canola	cytosol, nucleus, plasma membrane	38.18	45.2
CDY35590	Canola	cytosol	39.19	45.14
CDX90483	Canola	cytosol	37.84	44.53
CDY09638	Canola	cytosol	37.5	44.14

Protein Annotations

EnsemblPlants:CDX81676	EnsemblPlantsGene:GSBRNA2T00136596001	GO:A0A078CWY7	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
GO:GO:0007010	GO:GO:0008017	GO:GO:0008150	GO:GO:0009987	GO:GO:0016043	InterPro:MAP70
ncoils:Coil	PANTHER:PTHR31246	PANTHER:PTHR31246:SF2	PFAM:PF07058	ProteinID:CDX81676	ProteinID:CDX81676.1
SEG:seg	UniParc:UPI0004EE2D39	MapMan:35.1	:	:	:

Description

BnaC08g39250D

Coordinates

chrLK031826:-:307737..311211

Molecular Weight (calculated)

66028.7 Da

IEP (calculated)

9.987

GRAVY (calculated)

-0.776

Length

592 amino acids

Sequence
(BLAST)

001: MEGRGFISAS LASYRGGGGS KGLPRRRPMR PSCDADNELI TLLHGSDPVR IELNRLENEV RDKDRELSEA QAEIKALKLS ERQREKAVEE LTEELGKMSA
101: KLKLIENLLE SKNLDIKKIN EEKKASTAAQ FAAEASLRRV HAAQKDDDMP PIEAILAPLE AELKLARQEI ANLQDDNKSL DRLTKSKEAA LLDAERTVQS
201: ALAKASMVDD LQNKNQELMK QIEICQEENR IIDKMHRQKV AEVEKLMQSV RELEEAVLAG GAAANVVRDY QRKFQEMNEE RKVLERELAR AKVNANRVAT
301: VVANEWKDSN DQVMPVRQWL EERRFLQGEM QQLRDKLAIA DRAAKSEAQL KEKFLLRLRV LEESLKRPTS NRGTPVVRSS SNGPSRRQSL GGTETSPKYS
401: SNGSLTKRTP SSQSRSLTAS ASTALKHAKG TSISFDGGTR SLDRNKVLMN RPGSKFNHQS SEETSRVESL SSVKGEESDD KSTVNDSVPG VLYDLLQKEV
501: ITLRKAAHEK DQSLRDKDEA IEMLAKKVET LTKAMEVEAK KMRREVAVMG KEVAAMRVDK GQQDSKTRGL SSISKGSSGR VSGQIGMTRS TQ

Best Arabidopsis Sequence Match ( AT1G14840.1 )
(BLAST)

001: MEERGFMSPS LAISASYREG GSKGMSRRRS MRPSFDADNE FMNLLHGSDP VRIELNRLEN EVRDKDRELS EGQAEIKALR LSERQREKAV EELTEELGKM
101: AEKLKLIENL LESKNLEIKK INEEKKASMA AQFAAEASLR RVHAAQKDDD MPPIEAILAP LEAELKLSRQ EIAKLQDDNK SLDRLTKSKE AALLDAERTV
201: QSALAKASMV DDLQNKNQEL MKQIEICQEE NRIIDKMHRQ KVAEVEKLMQ SVRELEEAVL AGGAAANAVR DYQRKFQEMN EERKILEREL ARAKVNANRV
301: ATVVANEWKD SNDKVMPVRQ WLEERRFLQG EMQQLRDKLA IADRAAKSEA QLKEKFLLRL RVLEESLKGP TSSSSRGTSV GRSSSNGPTR RQSLGGAETS
401: PKITSNGSLI KRTPSSQLRS LTASASTVLK HAKGTSRSFD GGTRSLDRSK VLINGPRSNF PLNHKSSEGT SRGESPSSIK GEEESADKAT NNDSVPGVLY
501: DLLQKEVITL RKAAHEKDQS LRDKDEAIEM LAKKVETLTK AMDVEAKKMR REVAVMGKEV AAMRVVDKGQ QDSKTRRLSV SKGNTAQLLS GRVSGRIGMT
601: RSTQ

Arabidopsis Description

MAP70.4Microtubule-associated protein 70-4 [Source:UniProtKB/Swiss-Prot;Acc:Q9LQU7]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.