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Wheat
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Wheat
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • cytosol 3
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, mitochondrion
MultiLoc:cytosol
PProwler:mitochondrion
WoLF PSORT:cytosol
YLoc:cytosol
PPI

Inferred distinct locusB in Crop

locusBlocations
TraesCS1A01G207800.1
TraesCS1A01G207900.1
TraesCS1B01G221500.1
TraesCS1B01G221900.1
TraesCS1D01G211100.1
TraesCS1D01G211200.1
TraesCS3A01G302600.1
TraesCS3B01G333800.1
TraesCS3D01G299200.1
TraesCS6D01G319000.1

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT1G68060.1 TraesCS1A01G207800.1 AT2G45920.1 21798944
AT1G68060.1 TraesCS1A01G207900.1 AT2G45920.1 21798944
AT1G68060.1 TraesCS1B01G221500.1 AT2G45920.1 21798944
AT1G68060.1 TraesCS1B01G221900.1 AT2G45920.1 21798944
AT1G68060.1 TraesCS1D01G211100.1 AT2G45920.1 21798944
AT1G68060.1 TraesCS1D01G211200.1 AT2G45920.1 21798944
AT1G68060.1 TraesCS6D01G319000.1 AT2G45920.1 21798944
AT1G68060.1 TraesCS3A01G302600.1 AT5G61010.1 21798944
AT1G68060.1 TraesCS3B01G333800.1 AT5G61010.1 21798944
AT1G68060.1 TraesCS3D01G299200.1 AT5G61010.1 21798944
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS6B01G328200.1 Wheat cytosol 93.66 97.57
TraesCS6D01G278500.1 Wheat cytosol 95.16 95.16
Os02t0736100-01 Rice cytosol 87.98 87.98
EES07297 Sorghum cytosol 83.31 84.58
Zm00001d017961_P003 Maize cytosol 83.14 84.41
HORVU0Hr1G017080.1 Barley nucleus, plastid 93.66 83.23
TraesCS7A01G200700.1 Wheat nucleus 81.47 80.4
KRH49658 Soybean cytosol 74.46 73.0
KRH70354 Soybean endoplasmic reticulum 74.12 72.55
VIT_01s0011g05790.t01 Wine grape cytosol 76.13 71.59
Solyc04g008040.2.1 Tomato nucleus 72.79 70.66
PGSC0003DMT400075913 Potato cytosol 72.79 70.66
KRH60419 Soybean cytosol, plastid 72.62 70.62
KRH41720 Soybean cytosol 72.29 70.29
Solyc01g005330.2.1 Tomato cytosol 72.62 69.94
PGSC0003DMT400056068 Potato cytosol 72.62 69.94
Solyc05g017980.2.1 Tomato cytosol 72.45 69.77
PGSC0003DMT400051425 Potato cytosol, nucleus, plasma membrane 72.29 69.39
CDX84971 Canola cytosol 70.78 68.94
Bra010978.1-P Field mustard nucleus 70.28 68.9
CDY04200 Canola plastid 70.62 68.56
Bra004053.1-P Field mustard nucleus, plastid 70.62 68.45
CDY27573 Canola nucleus, plastid 71.45 68.37
CDY40783 Canola plastid 69.95 68.35
AT1G68060.1 Thale cress nucleus, plastid 70.95 68.33
CDX96050 Canola nucleus, plastid 71.29 68.32
Bra004279.1-P Field mustard nucleus, plastid 71.29 68.32
CDY07403 Canola nucleus, plastid 70.45 68.28
CDY36126 Canola nucleus 69.95 67.91
Bra012493.1-P Field mustard nucleus 69.45 67.86
CDY01879 Canola nucleus 70.62 67.79
CDY03865 Canola nucleus 69.45 67.53
Bra032784.1-P Field mustard nucleus 66.44 66.78
AT1G14840.1 Thale cress plastid 67.11 66.56
CDX81676 Canola plastid 65.44 66.22
Bra025859.1-P Field mustard nucleus 49.92 66.0
Bra026800.1-P Field mustard nucleus 66.11 65.89
Bra026184.1-P Field mustard nucleus 64.94 65.27
CDY33736 Canola nucleus 65.78 65.12
CDY45293 Canola nucleus 65.28 65.06
CDY51769 Canola nucleus 65.28 64.95
CDY17639 Canola nucleus, plastid 67.45 64.85
Bra024854.1-P Field mustard nucleus, plastid 68.11 64.76
AT2G01750.2 Thale cress nucleus 67.95 64.6
CDY36256 Canola nucleus, plastid 66.94 64.47
AT1G24764.3 Thale cress endoplasmic reticulum, extracellular 71.79 62.05
CDY24415 Canola nucleus 23.54 55.29
TraesCS4A01G078900.2 Wheat nucleus 33.89 38.23
Protein Annotations
EnsemblPlants:TraesCS6A01G298800.1EnsemblPlantsGene:TraesCS6A01G298800GO:GO:0003674GO:GO:0005488GO:GO:0005515GO:GO:0007010
GO:GO:0008017GO:GO:0008150GO:GO:0009987GO:GO:0016043InterPro:MAP70ncoils:Coil
PANTHER:PTHR31246PANTHER:PTHR31246:SF4PFAM:PF07058SEG:segMapMan:35.1:
Description
No Description!
Coordinates
chr6A:+:532020555..532027695
Molecular Weight (calculated)
66365.9 Da
IEP (calculated)
7.984
GRAVY (calculated)
-0.777
Length
599 amino acids
Sequence
(BLAST)
001: MADGGGGCEE GNAPAHRGSA RRRGAAQLGL DADELLTLMH GSDPVKVELN RLENEVRDTD RELGEAQAEI KALRLSERAR EKAVEELTDE LEKLDEKLKL
101: TESLLDSKNL ELKKTNDEKK AAMAAQFAAE ATLRRVHAAQ KDDDMPPIEA ILAPLEAELK LARQEIAKLQ EDNRALDRLT KQKEAALLEA ERTVQTALAK
201: AAMVDDMQNK NQDLMKQIEI CQEENKILDR LHRQKVAEVE KLSQTVRELE EAVLAGGAAA NAVRDYQRKV QEMNEERKVL DRELARTKVT ANRVAVVVAN
301: EWKDGNDKVM PVKQWLEERR FLQGEMQQLR DKLAIAERTA RSEAQVKEKY QWRLKVLEDG LRGPPSGSSR PPTEGRNTSG GSSRRLSLGG ADNMSKVSPV
401: GALMRRSPSF NSRPSLSTGS SLVLKHAKGT SRSFDGGTRS LDRGKVLVNG PHLLNRSTDA VGDCETTDSW KASGEEKNTE TTNSDSTDMV SGVLYDMLQK
501: EVVSLRKACH EKDQSLKDKD DAIEMLAKKV DTLTKAMEVE AKKMRREVAA MEKEVSAMRL EKEQENKAKR LGSLRGPGTV SQALPGRSAP RGGLSRNIQ
Best Arabidopsis Sequence Match ( AT1G24764.1 )
(BLAST)
001: MSDVSGDGDL SATVTEHEVT PQPPVSSATY PSLTVSASYK ESSGGKSSSK RRPIRPSFDA AADNEFITLL HGSDPVKVEL NRLENEVRDK DRELGEANAE
101: IKALRLSERQ REKAVEELTE ELTKLDEKLK LTESILESKN LEIKKINEEK KASMAAQFAA EATLRRVHAA QKDDDMPPIE AILAPLEAEL KLARSEIGKL
201: QEDNRALDRL TKSKEAALLE AERTVEAAMA KAAMVDDLQN KNQELMKQIE ICQEENKILD RMHRQKVAEV EKLTQTVREL EEAVLAGGAA ANAVRDYQRK
301: FQEMNEERKT LDRELARAKV TANRVATVVA NEWKDGNDKV MPVKQWLEER RFLQGEMQQL RDKLAITDRA AKSEAQLKEK FQLRLKVLEE TLRGTSSSAT
401: RNTPEARSMS NGPSRRQSLG GAENLQKFTS NGALSKKAPA SQMRHSLSIN STSVLKNAKG TSKSFDGGTR SVDRGKALLN GPGNYSFNKA TDDSKEAESG
501: NGWKENSEEK PQSEDPEAAT EDSVPGVLYD LLQKEVVSLR KASNEKDQSL KDKDDAIEML AKKVETLTKA MEVEAKKMRR EVAAMEKEVA AMRVEKDQDA
601: RAKRFSNSKS PSNTAQILAG RAAGRSGGLT KSTQ
Arabidopsis Description
ATMAP70-2microtubule-associated proteins 70-2 [Source:TAIR;Acc:AT1G24764]
SUBAcon: [nucleus]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.