CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid, nucleus

Predictor Summary:

nucleus 3
plastid 3
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus, plastid
Any Predictor:	cytosol, nucleus, plastid
BaCelLo:	nucleus
ChloroP:	plastid
MultiLoc:	cytosol
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY17639	Canola	nucleus, plastid	93.25	93.1
AT2G01750.2	Thale cress	nucleus	90.03	88.89
CDY45293	Canola	nucleus	75.4	78.04
CDY51769	Canola	nucleus	75.4	77.91
CDX81676	Canola	plastid	72.19	75.84
CDX84402	Canola	cytosol	7.23	73.77
CDY33736	Canola	nucleus	71.54	73.55
KRH49658	Soybean	cytosol	71.38	72.67
CDX95376	Canola	cytosol	7.23	72.58
KRH70354	Soybean	endoplasmic reticulum	71.06	72.22
KRH41720	Soybean	cytosol	70.42	71.1
KRH60419	Soybean	cytosol, plastid	70.42	71.1
CDX84971	Canola	cytosol	70.1	70.89
CDX96050	Canola	nucleus, plastid	70.74	70.4
CDY27573	Canola	nucleus, plastid	70.74	70.29
CDY07403	Canola	nucleus, plastid	69.77	70.23
CDY04200	Canola	plastid	69.61	70.18
PGSC0003DMT400075913	Potato	cytosol	69.29	69.85
CDY01879	Canola	nucleus	69.94	69.71
CDY40783	Canola	plastid	68.65	69.66
Solyc04g008040.2.1	Tomato	nucleus	68.97	69.53
PGSC0003DMT400051425	Potato	cytosol, nucleus, plasma membrane	69.61	69.39
PGSC0003DMT400056068	Potato	cytosol	69.29	69.29
VIT_01s0011g05790.t01	Wine grape	cytosol	70.9	69.23
Solyc01g005330.2.1	Tomato	cytosol	69.13	69.13
Solyc05g017980.2.1	Tomato	cytosol	68.97	68.97
Os02t0736100-01	Rice	cytosol	66.24	68.78
CDY03865	Canola	nucleus	68.01	68.67
TraesCS6B01G328200.1	Wheat	cytosol	63.02	68.17
TraesCS6D01G278500.1	Wheat	cytosol	64.95	67.45
CDY36126	Canola	nucleus	66.88	67.42
TraesCS6A01G298800.1	Wheat	cytosol	64.47	66.94
Os06t0251700-01	Rice	nucleus	64.95	66.45
EER89530	Sorghum	nucleus	64.63	66.34
EES07297	Sorghum	cytosol	62.86	66.27
Zm00001d017961_P003	Maize	cytosol	62.38	65.76
TraesCS7D01G204000.1	Wheat	nucleus	64.15	65.73
TraesCS7A01G200700.1	Wheat	nucleus	63.99	65.57
TraesCS7B01G107500.1	Wheat	nucleus	63.99	65.57
Zm00001d037291_P001	Maize	nucleus	63.5	65.18
Zm00001d044724_P001	Maize	cytosol	63.34	65.02
HORVU7Hr1G041170.1	Barley	nucleus	63.5	63.71
CDX95377	Canola	cytosol	6.27	61.9
HORVU0Hr1G017080.1	Barley	nucleus, plastid	65.76	60.68
CDY24415	Canola	nucleus	20.58	50.2
CDY35590	Canola	cytosol	38.91	47.08
CDY42967	Canola	cytosol, nucleus, plasma membrane	37.78	47.0
CDY09638	Canola	cytosol	36.98	45.73
CDX90483	Canola	cytosol	36.82	45.53

Protein Annotations

EnsemblPlants:CDY36256	EnsemblPlantsGene:GSBRNA2T00060217001	GO:A0A078HEQ9	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
GO:GO:0007010	GO:GO:0008017	GO:GO:0008150	GO:GO:0009987	GO:GO:0016043	InterPro:MAP70
ncoils:Coil	PANTHER:PTHR31246	PANTHER:PTHR31246:SF4	PFAM:PF07058	ProteinID:CDY36256	ProteinID:CDY36256.1
SEG:seg	UniParc:UPI0004EF29F8	UniProt:A0A078HEQ9	MapMan:35.1	:	:

Description

BnaC07g21100DBnaC07g21100D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HEQ9]

Coordinates

chrLK032371:+:314225..318417

Molecular Weight (calculated)

69341.0 Da

IEP (calculated)

10.200

GRAVY (calculated)

-0.868

Length

622 amino acids

Sequence
(BLAST)

001: MEERGYAFEV SNGRPTASEF GSSRRNSSPQ RPSLTKSSSV REGGGSKGRR SVKPSSEDEF ITLLHGSDPV RVELSRLENE VRDKDRELSE SQAEIKALRL
101: SERQRKKAVE ELTEELGKMS EKLKLAENLV QSKNLEIKKI NEEKRASMAA QFAAEATLRR VHAAQKDDDM PPIEAILAPL EAELKLARHE IAKLQDDNRA
201: LDRLTKSKEA ALLDAERTVE TALAKASMVD DLQNKNQELM KQIEICQEEN RILDRMHRQK VAEVEKFTQT VRELEEAVLA GGAAANAVRD YQRKFQEMNE
301: ERRVLDRELA RAKVSASRVA TVVANEWKDG SDKVMPVKQW LEERRFLQGE MQQLRDKLAI ADRAAKSEAQ LKEKFQLRLK VLEESLRGPP SGRSISNGPS
401: RRQSLGGADV IPKLTSNGFF SKRTPSSQFR SLSSSASTVL KHARGTSKSF DGGSRSLDRS KLLTNERSSK FPLNQSSEGT SEGDSPNSTK QEESEKPAGG
501: TNNDSVPGVL HDLLQKEVIT LRKAAHDKDQ SIRDKDEAIE MLAKKVETLT KAMEVEAKKM RREVAAMEKE VSAMRVDNKG PDSRTRRLST TTTNSRGSST
601: TTAHLLSGSR GSGRMGMTRS TQ

Best Arabidopsis Sequence Match ( AT2G01750.2 )
(BLAST)

001: MEEGGYAFEV NNGRPTASEF GTTARISSPS LTMSSSFREG GGGGGSKGLT RRRSMKPSFD ADNEFITLLH GSDPVKVELN RLENDVRDKD RELSESQAEI
101: KALRLSERQR EKAVEELTEE LGKMSEKLKL TENLLDSKNL EIKKINEEKR ASMAAQFAAE ATLRRVHAAQ KDDDMPPIEA ILAPLEAELK LARHEIVKLQ
201: DDNRALDRLT KSKEAALLDA ERTVQSALAK ASMVDDLQNK NQELMKQIEI CQEENRILDK LHRQKVAEVE KFTQTVRELE EAVLAGGTAA NAVRDYQRKF
301: QEMNEERRIL DRELARAKVS ASRVATVVAN EWKDGSDKVM PVKQWLEERR FLQGEMQQLR DKLAIADRAA KSEAQLKEKF QLRLRVLEES LRGPSSSGNR
401: STPEGRSMSN GPSRRQSLGG ADIIPKLTSN GFFSKRSPSS QFRSLNASTS TILKHAKGTS RSFDGGSRSL DRSKVLTNEP RSKFPLNQSS EGTSGGGSPN
501: STKQGDSEKA AGTNNDSVPG VLHDLLQKEV ITLRKAANDK DQSLRDKDEA IEMLAKKVET LTKAMEVEAK KMRREVAAME KEVSAMRVDN KGSDSRTRRH
601: STNSKGASTT AQLLSGSRGS GRMGMTRSTQ

Arabidopsis Description

MAP70-3Microtubule-associated protein 70-3 [Source:UniProtKB/TrEMBL;Acc:F4IPB2]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.