Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| VIT_17s0000g07350.t01 |
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT1G68060.1 | VIT_17s0000g07350.t01 | AT5G61010.1 | 21798944 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH70354 | Soybean | endoplasmic reticulum | 83.2 | 86.6 |
| KRH49658 | Soybean | cytosol | 82.73 | 86.25 |
| KRH60419 | Soybean | cytosol, plastid | 82.26 | 85.06 |
| KRH41720 | Soybean | cytosol | 82.1 | 84.9 |
| Solyc01g005330.2.1 | Tomato | cytosol | 79.91 | 81.83 |
| PGSC0003DMT400051425 | Potato | cytosol, nucleus, plasma membrane | 79.75 | 81.41 |
| Solyc04g008040.2.1 | Tomato | nucleus | 77.55 | 80.06 |
| PGSC0003DMT400075913 | Potato | cytosol | 77.55 | 80.06 |
| Solyc05g017980.2.1 | Tomato | cytosol | 77.39 | 79.26 |
| PGSC0003DMT400056068 | Potato | cytosol | 77.24 | 79.1 |
| CDX84971 | Canola | cytosol | 75.51 | 78.21 |
| CDY27573 | Canola | nucleus, plastid | 75.98 | 77.32 |
| Os02t0736100-01 | Rice | cytosol | 72.37 | 76.96 |
| TraesCS6B01G328200.1 | Wheat | cytosol | 69.39 | 76.87 |
| CDY07403 | Canola | nucleus, plastid | 74.57 | 76.86 |
| TraesCS6D01G278500.1 | Wheat | cytosol | 72.06 | 76.63 |
| CDY40783 | Canola | plastid | 73.47 | 76.35 |
| Bra004053.1-P | Field mustard | nucleus, plastid | 73.94 | 76.21 |
| CDX96050 | Canola | nucleus, plastid | 74.73 | 76.16 |
| Bra004279.1-P | Field mustard | nucleus, plastid | 74.73 | 76.16 |
| TraesCS6A01G298800.1 | Wheat | cytosol | 71.59 | 76.13 |
| AT1G68060.1 | Thale cress | nucleus, plastid | 74.25 | 76.05 |
| Bra032784.1-P | Field mustard | nucleus | 71.11 | 76.01 |
| CDY04200 | Canola | plastid | 73.31 | 75.69 |
| CDY01879 | Canola | nucleus | 74.1 | 75.64 |
| CDY03865 | Canola | nucleus | 73.0 | 75.49 |
| Bra010978.1-P | Field mustard | nucleus | 72.37 | 75.45 |
| Bra012493.1-P | Field mustard | nucleus | 72.53 | 75.37 |
| AT1G14840.1 | Thale cress | plastid | 70.49 | 74.34 |
| EER89530 | Sorghum | nucleus | 70.64 | 74.26 |
| EES07297 | Sorghum | cytosol | 68.76 | 74.24 |
| TraesCS7D01G204000.1 | Wheat | nucleus | 70.64 | 74.14 |
| CDY36126 | Canola | nucleus | 71.74 | 74.07 |
| TraesCS7A01G200700.1 | Wheat | nucleus | 70.49 | 73.97 |
| TraesCS7B01G107500.1 | Wheat | nucleus | 70.33 | 73.81 |
| Zm00001d044724_P001 | Maize | cytosol | 69.7 | 73.27 |
| Zm00001d017961_P003 | Maize | cytosol | 67.82 | 73.22 |
| Zm00001d037291_P001 | Maize | nucleus | 69.54 | 73.1 |
| Os06t0251700-01 | Rice | nucleus | 69.54 | 72.86 |
| Bra025859.1-P | Field mustard | nucleus | 51.65 | 72.63 |
| CDY33736 | Canola | nucleus | 68.92 | 72.56 |
| CDX81676 | Canola | plastid | 67.35 | 72.47 |
| Bra026800.1-P | Field mustard | nucleus | 68.29 | 72.38 |
| HORVU7Hr1G041170.1 | Barley | nucleus | 70.17 | 72.1 |
| CDY45293 | Canola | nucleus | 67.97 | 72.05 |
| AT2G01750.2 | Thale cress | nucleus | 71.11 | 71.9 |
| Bra026184.1-P | Field mustard | nucleus | 67.19 | 71.81 |
| CDY51769 | Canola | nucleus | 67.82 | 71.76 |
| CDY17639 | Canola | nucleus, plastid | 70.17 | 71.75 |
| Bra024854.1-P | Field mustard | nucleus, plastid | 70.33 | 71.11 |
| CDY36256 | Canola | nucleus, plastid | 69.23 | 70.9 |
| AT1G24764.3 | Thale cress | endoplasmic reticulum, extracellular | 75.98 | 69.84 |
| VIT_08s0007g05140.t01 | Wine grape | cytosol, plastid | 65.31 | 68.99 |
| HORVU0Hr1G017080.1 | Barley | nucleus, plastid | 71.59 | 67.66 |
| CDY24415 | Canola | nucleus | 24.18 | 60.39 |
| VIT_00s0194g00260.t01 | Wine grape | cytosol | 43.64 | 47.6 |
Protein Annotations
| EntrezGene:100266222 | wikigene:100266222 | MapMan:35.1 | ProteinID:CBI26828 | ProteinID:CBI26828.3 | ncoils:Coil |
| UniProt:D7T8K7 | EMBL:FN595752 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0007010 |
| GO:GO:0008017 | GO:GO:0008150 | GO:GO:0009987 | GO:GO:0016043 | EntrezGene:LOC100266222 | wikigene:LOC100266222 |
| InterPro:MAP70 | PFAM:PF07058 | PANTHER:PTHR31246 | PANTHER:PTHR31246:SF4 | UniParc:UPI00015C8A59 | ArrayExpress:VIT_01s0011g05790 |
| EnsemblPlantsGene:VIT_01s0011g05790 | EnsemblPlants:VIT_01s0011g05790.t01 | unigene:Vvi.286 | RefSeq:XP_002284904 | RefSeq:XP_002284904.1 | SEG:seg |
Description
No Description!
Coordinates
chr1:+:5559978..5567199
Molecular Weight (calculated)
70964.2 Da
IEP (calculated)
8.563
GRAVY (calculated)
-0.738
Length
637 amino acids
Sequence
(BLAST)
(BLAST)
001: MAEISGDIAS VSPVELSYSE NGGNGGRPPA NEAVYVVSTP PLTVSQSFKE GKGSSRRRAS VRPSLDADEF INLLHGSDPV KVELNRLENE VRDKDRELGE
101: AQAEIKALRF SERLREKAVE EITEELSKVE EKLKLTESLL ESKNLEIKKI NDEKKASMAA QFAAEATLRR VHAAQKDDDM PPIEAILAPL EAELKLARQE
201: IAKLQDDNKA LDRLTKSKEA ALLEAERTVQ VALAKASMVD DLQNKNQELM KQIEICQEEN KILDKMHRQK VAEVEKLTQT VRELEEAVLA GGAAANAVRD
301: YQRKVQEMNE ERKTLDRELA RAKVTANRVA VVVANEWKDA NDKVMPVKQW LEERRFLQGE MQQLRDKLAI TERTAKSEAQ LKEKYHLRLK VIEESLRGSS
401: NSNNRSTPEV RSVSNGPSRR QSLGGADNIS KFIPNGFLSK RTPTSQLRSS LSSGSSSVLR HAKGTSKSFD GGTRSLDRGK VLLNGTLPNY ALNQSCDATK
501: DIEVHDAWKG NSDEKPNEFP VVDTEDSVPG VLYDMLQKEV VSLRKAGHEK DQSLKDKDDA IEMLAKKVDT LTKAMEVEAK KMRREVAAME KEVAAMRVEK
601: DHENRAKRFG SSKGPVSNTQ LLPGRNIARG GLTRSTQ
101: AQAEIKALRF SERLREKAVE EITEELSKVE EKLKLTESLL ESKNLEIKKI NDEKKASMAA QFAAEATLRR VHAAQKDDDM PPIEAILAPL EAELKLARQE
201: IAKLQDDNKA LDRLTKSKEA ALLEAERTVQ VALAKASMVD DLQNKNQELM KQIEICQEEN KILDKMHRQK VAEVEKLTQT VRELEEAVLA GGAAANAVRD
301: YQRKVQEMNE ERKTLDRELA RAKVTANRVA VVVANEWKDA NDKVMPVKQW LEERRFLQGE MQQLRDKLAI TERTAKSEAQ LKEKYHLRLK VIEESLRGSS
401: NSNNRSTPEV RSVSNGPSRR QSLGGADNIS KFIPNGFLSK RTPTSQLRSS LSSGSSSVLR HAKGTSKSFD GGTRSLDRGK VLLNGTLPNY ALNQSCDATK
501: DIEVHDAWKG NSDEKPNEFP VVDTEDSVPG VLYDMLQKEV VSLRKAGHEK DQSLKDKDDA IEMLAKKVDT LTKAMEVEAK KMRREVAAME KEVAAMRVEK
601: DHENRAKRFG SSKGPVSNTQ LLPGRNIARG GLTRSTQ
001: MSDVSGDGDL SATVTEHEVT PQPPVSSATY PSLTVSASYK ESSGGKSSSK RRPIRPSFDA AADNEFITLL HGSDPVKVEL NRLENEVRDK DRELGEANAE
101: IKALRLSERQ REKAVEELTE ELTKLDEKLK LTESILESKN LEIKKINEEK KASMAAQFAA EATLRRVHAA QKDDDMPPIE AILAPLEAEL KLARSEIGKL
201: QEDNRALDRL TKSKEAALLE AERTVEAAMA KAAMVDDLQN KNQELMKQIE ICQEENKILD RMHRQKVAEV EKLTQTVREL EEAVLAGGAA ANAVRDYQRK
301: FQEMNEERKT LDRELARAKV TANRVATVVA NEWKDGNDKV MPVKQWLEER RFLQGEMQQL RDKLAITDRA AKSEAQLKEK FQLRLKVLEE TLRGTSSSAT
401: RNTPEARSMS NGPSRRQSLG GAENLQKFTS NGALSKKAPA SQMRHSLSIN STSVLKNAKG TSKSFDGGTR SVDRGKALLN GPGNYSFNKA TDDSKEAESG
501: NGWKENSEEK PQSEDPEAAT EDSVPGVLYD LLQKEVVSLR KASNEKDQSL KDKDDAIEML AKKVETLTKA MEVEAKKMRR EVAAMEKEVA AMRVEKDQDA
601: RAKRFSNSKS PSNTAQILAG RAAGRSGGLT KSTQ
101: IKALRLSERQ REKAVEELTE ELTKLDEKLK LTESILESKN LEIKKINEEK KASMAAQFAA EATLRRVHAA QKDDDMPPIE AILAPLEAEL KLARSEIGKL
201: QEDNRALDRL TKSKEAALLE AERTVEAAMA KAAMVDDLQN KNQELMKQIE ICQEENKILD RMHRQKVAEV EKLTQTVREL EEAVLAGGAA ANAVRDYQRK
301: FQEMNEERKT LDRELARAKV TANRVATVVA NEWKDGNDKV MPVKQWLEER RFLQGEMQQL RDKLAITDRA AKSEAQLKEK FQLRLKVLEE TLRGTSSSAT
401: RNTPEARSMS NGPSRRQSLG GAENLQKFTS NGALSKKAPA SQMRHSLSIN STSVLKNAKG TSKSFDGGTR SVDRGKALLN GPGNYSFNKA TDDSKEAESG
501: NGWKENSEEK PQSEDPEAAT EDSVPGVLYD LLQKEVVSLR KASNEKDQSL KDKDDAIEML AKKVETLTKA MEVEAKKMRR EVAAMEKEVA AMRVEKDQDA
601: RAKRFSNSKS PSNTAQILAG RAAGRSGGLT KSTQ
Arabidopsis Description
ATMAP70-2microtubule-associated proteins 70-2 [Source:TAIR;Acc:AT1G24764]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.