Factsheet for Bra024854.1-P

Subcellular Localization

min:

: max

Winner_takes_all: plastid, nucleus

Predictor Summary:

nucleus 3
plastid 3
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus, plastid
Any Predictor:	cytosol, nucleus, plastid
BaCelLo:	nucleus
ChloroP:	plastid
MultiLoc:	cytosol
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY17639	Canola	nucleus, plastid	94.76	95.83
AT2G01750.2	Thale cress	nucleus	87.62	87.62
Bra026184.1-P	Field mustard	nucleus	73.02	77.18
Bra025859.1-P	Field mustard	nucleus	54.44	75.72
Bra026800.1-P	Field mustard	nucleus	71.27	74.71
KRH49658	Soybean	cytosol	72.06	74.3
KRH70354	Soybean	endoplasmic reticulum	71.9	74.02
KRH60419	Soybean	cytosol, plastid	70.79	72.4
KRH41720	Soybean	cytosol	70.48	72.08
Bra004279.1-P	Field mustard	nucleus, plastid	70.79	71.36
PGSC0003DMT400075913	Potato	cytosol	69.68	71.15
Solyc04g008040.2.1	Tomato	nucleus	69.37	70.83
PGSC0003DMT400051425	Potato	cytosol, nucleus, plasma membrane	69.84	70.51
VIT_01s0011g05790.t01	Wine grape	cytosol	71.11	70.33
Solyc01g005330.2.1	Tomato	cytosol	69.37	70.26
Bra004053.1-P	Field mustard	nucleus, plastid	68.73	70.06
Os02t0736100-01	Rice	cytosol	66.51	69.95
PGSC0003DMT400056068	Potato	cytosol	68.73	69.61
Bra010978.1-P	Field mustard	nucleus	67.3	69.39
TraesCS6B01G328200.1	Wheat	cytosol	63.33	69.39
Solyc05g017980.2.1	Tomato	cytosol	68.41	69.29
Bra012493.1-P	Field mustard	nucleus	67.14	69.0
Bra032784.1-P	Field mustard	nucleus	65.08	68.79
TraesCS6D01G278500.1	Wheat	cytosol	65.24	68.61
TraesCS6A01G298800.1	Wheat	cytosol	64.76	68.11
EER89530	Sorghum	nucleus	64.92	67.49
EES07297	Sorghum	cytosol	63.02	67.29
Os06t0251700-01	Rice	nucleus	64.92	67.27
Zm00001d017961_P003	Maize	cytosol	62.38	66.61
TraesCS7A01G200700.1	Wheat	nucleus	63.97	66.39
TraesCS7B01G107500.1	Wheat	nucleus	63.97	66.39
TraesCS7D01G204000.1	Wheat	nucleus	63.97	66.39
Zm00001d044724_P001	Maize	cytosol	63.81	66.34
Zm00001d037291_P001	Maize	nucleus	63.81	66.34
HORVU7Hr1G041170.1	Barley	nucleus	63.49	64.52
HORVU0Hr1G017080.1	Barley	nucleus, plastid	65.71	61.42
Bra026236.1-P	Field mustard	cytosol	36.83	46.68

Protein Annotations

MapMan:35.1	EnsemblPlantsGene:Bra024854	EnsemblPlants:Bra024854.1	EnsemblPlants:Bra024854.1-P	ncoils:Coil	GO:GO:0003674
GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0005623	GO:GO:0005886	GO:GO:0007010
GO:GO:0008017	GO:GO:0008150	GO:GO:0009987	GO:GO:0016020	GO:GO:0016043	UniProt:M4E7U8
InterPro:MAP70	PFAM:PF07058	PANTHER:PTHR31246	PANTHER:PTHR31246:SF4	UniParc:UPI000253F93E	SEG:seg

Description

AT2G01750 (E=8e-269) ATMAP70-3 | ATMAP70-3 (microtubule-associated proteins 70-3); microtubule binding

Coordinates

chrA06:+:23853502..23856959

Molecular Weight (calculated)

70147.9 Da

IEP (calculated)

10.109

GRAVY (calculated)

-0.881

Length

630 amino acids

Sequence
(BLAST)

001: MEERGGYAFE VNNGRPAANE FGSSRRNSSP QRPSLTKSSS VREGGGSKGR RSMKPSSDDE FITLLHGSDP VRVELSRLEN EVRDKDRELS ESQAEIKALR
101: LSERQREKAV EELTEELGKM SEKLKLAENL VQSKNLEIKK INEEKRASMA AQFAAEATLR RVHAAQKDDD MPPIEAILAP LEAELKLARH EIAKLQDDNR
201: ALDRLTKSKE AALLDAERTV ETALAKASMV DDLQNKNQEL MKQIEICQEE NRILDRMHRQ KVAEVEKFTQ TVRELEEAVL AGGAAANAVR DYQRKFQEMN
301: EERRVLDREL ARAKVSASRV ATVVANEWKD GSDKVMPVKQ WLEERRFLQG EMQQLRDKLA IADRAAKSEA QLKEKFQLRL KVLEESLRGP PSGGNRTTPE
401: GRSISNGPSR RQSLGGADVI PKLTSNGFFS KRTPSSQFRS LSSSASTVLK HARGTSKSFD GGSRSLDRSK LLTNERSAKF PLNQSSEGTS EGDSPNSTKQ
501: EESEKPAGGT SNDSVPGVLH DLLQKEVITL RKAAHDKDQS IRDKDEAIEM LAKKVETLTK AMEVEAKKMR REVAAMEKEV SAMRVDNKGP ESRTRRLSTT
601: TTNPRGSSTT TAHLLSGRGS GRMGMTRSTQ

Best Arabidopsis Sequence Match ( AT2G01750.1 )
(BLAST)

001: MEEGGYAFEV NNGRPTASEF GTTARISSPS LTMSSSFREG GGGGGSKGLT RRRSMKPSFD ADNEFITLLH GSDPVKVELN RLENDVRDKD RELSESQAEI
101: KALRLSERQR EKAVEELTEE LGKMSEKLKL TENLLDSKNL EIKKINEEKR ASMAAQFAAE ATLRRVHAAQ KDDDMPPIEA ILAPLEAELK LARHEIVKLQ
201: DDNRALDRLT KSKEAALLDA ERTVQSALAK ASMVDDLQNK NQELMKQIEI CQEENRILDK LHRQKVAEVE KFTQTVRELE EAVLAGGTAA NAVRDYQRKF
301: QEMNEERRIL DRELARAKVS ASRVATVVAN EWKDGSDKVM PVKQWLEERR FLQGEMQQLR DKLAIADRAA KSEAQLKEKF QLRLRVLEES LRGPSSSGNR
401: STPEGRSMSN GPSRRQSLGG ADIIPKLTSN GFFSKRSPSS QFRSLNASTS TILKHAKGTS RSFDGGSRSL DRSKVLTNEP RSKFPLNQSS EGTSGGGSPN
501: STKQGDSEKA AGTNNDSVPG VLHDLLQKEV ITLRKAANDK DQSLRDKDEA IEMLAKKVET LTKAMEVEAK KMRREVAAME KEVSAMRVDN KGSDSRTRRH
601: STNSKGASTT AQLLSGRGSG RMGMTRSTQ

Arabidopsis Description

MAP70-3Microtubule-associated protein 70-3 [Source:UniProtKB/TrEMBL;Acc:F4IPB2]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.