Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT1G68060.1 | KRH54704 | AT5G61010.1 | 21798944 |
| AT1G68060.1 | KRH63230 | AT5G61010.1 | 21798944 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH70354 | Soybean | endoplasmic reticulum | 97.22 | 97.06 |
| KRH41720 | Soybean | cytosol | 90.02 | 89.29 |
| KRH60419 | Soybean | cytosol, plastid | 89.36 | 88.64 |
| VIT_01s0011g05790.t01 | Wine grape | cytosol | 86.25 | 82.73 |
| PGSC0003DMT400075913 | Potato | cytosol | 80.36 | 79.58 |
| Solyc04g008040.2.1 | Tomato | nucleus | 80.36 | 79.58 |
| Solyc01g005330.2.1 | Tomato | cytosol | 80.85 | 79.42 |
| PGSC0003DMT400051425 | Potato | cytosol, nucleus, plasma membrane | 81.01 | 79.33 |
| PGSC0003DMT400056068 | Potato | cytosol | 80.2 | 78.78 |
| Solyc05g017980.2.1 | Tomato | cytosol | 79.71 | 78.3 |
| Os02t0736100-01 | Rice | cytosol | 74.96 | 76.46 |
| CDX84971 | Canola | cytosol | 76.76 | 76.26 |
| AT1G68060.1 | Thale cress | nucleus, plastid | 77.58 | 76.21 |
| Bra004279.1-P | Field mustard | nucleus, plastid | 77.58 | 75.84 |
| CDX96050 | Canola | nucleus, plastid | 77.58 | 75.84 |
| AT1G14840.1 | Thale cress | plastid | 74.96 | 75.83 |
| CDY04200 | Canola | plastid | 76.1 | 75.36 |
| CDY07403 | Canola | nucleus, plastid | 76.1 | 75.24 |
| CDY27573 | Canola | nucleus, plastid | 77.09 | 75.24 |
| CDY40783 | Canola | plastid | 75.29 | 75.04 |
| CDY01879 | Canola | nucleus | 76.43 | 74.84 |
| Bra025859.1-P | Field mustard | nucleus | 55.48 | 74.83 |
| Bra004053.1-P | Field mustard | nucleus, plastid | 75.61 | 74.76 |
| TraesCS6D01G278500.1 | Wheat | cytosol | 73.0 | 74.46 |
| TraesCS6A01G298800.1 | Wheat | cytosol | 73.0 | 74.46 |
| TraesCS6B01G328200.1 | Wheat | cytosol | 70.05 | 74.43 |
| Bra012493.1-P | Field mustard | nucleus | 74.47 | 74.23 |
| CDY03865 | Canola | nucleus | 74.63 | 74.03 |
| CDX81676 | Canola | plastid | 71.69 | 73.99 |
| Bra010978.1-P | Field mustard | nucleus | 73.98 | 73.98 |
| Bra032784.1-P | Field mustard | nucleus | 72.01 | 73.83 |
| EES07297 | Sorghum | cytosol | 71.19 | 73.73 |
| CDY33736 | Canola | nucleus | 73.0 | 73.72 |
| Bra026800.1-P | Field mustard | nucleus | 72.5 | 73.71 |
| EER89530 | Sorghum | nucleus | 73.0 | 73.6 |
| TraesCS7A01G200700.1 | Wheat | nucleus | 73.0 | 73.48 |
| CDY45293 | Canola | nucleus | 72.18 | 73.38 |
| TraesCS7B01G107500.1 | Wheat | nucleus | 72.83 | 73.31 |
| Zm00001d044724_P001 | Maize | cytosol | 72.67 | 73.27 |
| Bra026184.1-P | Field mustard | nucleus | 71.36 | 73.15 |
| CDY51769 | Canola | nucleus | 72.01 | 73.09 |
| TraesCS7D01G204000.1 | Wheat | nucleus | 72.5 | 72.98 |
| Zm00001d037291_P001 | Maize | nucleus | 72.34 | 72.94 |
| CDY36126 | Canola | nucleus | 73.65 | 72.93 |
| AT2G01750.2 | Thale cress | nucleus | 74.8 | 72.54 |
| Os06t0251700-01 | Rice | nucleus | 72.18 | 72.53 |
| Zm00001d017961_P003 | Maize | cytosol | 69.89 | 72.37 |
| CDY17639 | Canola | nucleus, plastid | 73.65 | 72.23 |
| Bra024854.1-P | Field mustard | nucleus, plastid | 74.3 | 72.06 |
| HORVU7Hr1G041170.1 | Barley | nucleus | 72.5 | 71.45 |
| CDY36256 | Canola | nucleus, plastid | 72.67 | 71.38 |
| AT1G24764.3 | Thale cress | endoplasmic reticulum, extracellular | 76.76 | 67.68 |
| KRH66768 | Soybean | mitochondrion | 54.17 | 67.28 |
| KRG95100 | Soybean | nucleus | 64.48 | 67.12 |
| HORVU0Hr1G017080.1 | Barley | nucleus, plastid | 72.01 | 65.28 |
| CDY24415 | Canola | nucleus | 25.37 | 60.78 |
| KRH11576 | Soybean | cytosol | 44.19 | 47.29 |
| KRH01966 | Soybean | mitochondrion | 43.04 | 46.63 |
| KRH36588 | Soybean | cytosol | 43.54 | 46.58 |
| KRH51187 | Soybean | cytosol | 43.54 | 46.42 |
Protein Annotations
| EntrezGene:100800667 | MapMan:35.1 | EMBL:ACUP02004582 | ncoils:Coil | EnsemblPlantsGene:GLYMA_07G170700 | GO:GO:0003674 |
| GO:GO:0005488 | GO:GO:0005515 | GO:GO:0007010 | GO:GO:0008017 | GO:GO:0008150 | GO:GO:0009987 |
| GO:GO:0016043 | UniProt:I1KKW1 | ProteinID:KRH49657.1 | EnsemblPlants:KRH49658 | ProteinID:KRH49658 | ProteinID:KRH49658.1 |
| InterPro:MAP70 | PFAM:PF07058 | PANTHER:PTHR31246 | PANTHER:PTHR31246:SF2 | UniParc:UPI00023C6FDB | SEG:seg |
Description
hypothetical protein
Coordinates
chr7:+:29456634..29464972
Molecular Weight (calculated)
68034.9 Da
IEP (calculated)
9.656
GRAVY (calculated)
-0.778
Length
611 amino acids
Sequence
(BLAST)
(BLAST)
001: MAEVPGDGGA TLSVSGSFKE GRGSARRRGG GGGVRPPSMD ADEFMNLLHG SDPVKVELNR LENEVRDKDR ELSEAQAEIK ALRLSERLRE KAVEELTEEL
101: SKVDGKLKLT ESLLESKNLE IKKINDEKKA SMAAQFAAEA TLRRVHAAQK DDDMPPIEAI LAPLEAELKL ARQEIAKLQD DNKALDRLTK SKEAALLEAE
201: RTVQVALAKA SMVDDLQNKN QELIKQIEIC QEENKILDKM HRQKVAEVEK LTQTVRELEE AVLAGGAAAN AVRDYQRKVQ EMNEERKTLD RELARAKVTA
301: NRVAVVVANE WKDANDKVMP VKQWLEERRF LQGEMQQLRD KLAIVERAAK SEAQLKEKYH LRLKVLEESL RGNSNSSNRG TPEGRSMSNG PSRRQSLGGA
401: DNFSKLTSNG FLSKRSPSSQ LRSSLSSSTV LKHAKGTSKS FDGGTRSLER SKMLLNGTPL SYSFNQSLEE TKEREASDNW KGNSDDKPND FPTVDLVDSV
501: PGVLYDLLQK EVIALRKAGH EKDQSLKDKG DAIEMLAKKV DTLTKAMEVE AKKMRREVAA MEKEVAAMRV EKEQENRAKR FSNVKGPVNS AQQQLISGRN
601: VTRGGLTRST Q
101: SKVDGKLKLT ESLLESKNLE IKKINDEKKA SMAAQFAAEA TLRRVHAAQK DDDMPPIEAI LAPLEAELKL ARQEIAKLQD DNKALDRLTK SKEAALLEAE
201: RTVQVALAKA SMVDDLQNKN QELIKQIEIC QEENKILDKM HRQKVAEVEK LTQTVRELEE AVLAGGAAAN AVRDYQRKVQ EMNEERKTLD RELARAKVTA
301: NRVAVVVANE WKDANDKVMP VKQWLEERRF LQGEMQQLRD KLAIVERAAK SEAQLKEKYH LRLKVLEESL RGNSNSSNRG TPEGRSMSNG PSRRQSLGGA
401: DNFSKLTSNG FLSKRSPSSQ LRSSLSSSTV LKHAKGTSKS FDGGTRSLER SKMLLNGTPL SYSFNQSLEE TKEREASDNW KGNSDDKPND FPTVDLVDSV
501: PGVLYDLLQK EVIALRKAGH EKDQSLKDKG DAIEMLAKKV DTLTKAMEVE AKKMRREVAA MEKEVAAMRV EKEQENRAKR FSNVKGPVNS AQQQLISGRN
601: VTRGGLTRST Q
001: MSDVSGDGDL SATVTEHEVT PQPPVSSATY PSLTVSASYK ESSGGKSSSK RRPIRPSFDA AADNEFITLL HGSDPVKVEL NRLENEVRDK DRELGEANAE
101: IKALRLSERQ REKAVEELTE ELTKLDEKLK LTESILESKN LEIKKINEEK KASMAAQFAA EATLRRVHAA QKDDDMPPIE AILAPLEAEL KLARSEIGKL
201: QEDNRALDRL TKSKEAALLE AERTVEAAMA KAAMVDDLQN KNQELMKQIE ICQEENKILD RMHRQKVAEV EKLTQTVREL EEAVLAGGAA ANAVRDYQRK
301: FQEMNEERKT LDRELARAKV TANRVATVVA NEWKDGNDKV MPVKQWLEER RFLQGEMQQL RDKLAITDRA AKSEAQLKEK FQLRLKVLEE TLRGTSSSAT
401: RNTPEARSMS NGPSRRQSLG GAENLQKFTS NGALSKKAPA SQMRHSLSIN STSVLKNAKG TSKSFDGGTR SVDRGKALLN GPGNYSFNKA TDDSKEAESG
501: NGWKENSEEK PQSEDPEAAT EDSVPGVLYD LLQKEVVSLR KASNEKDQSL KDKDDAIEML AKKVETLTKA MEVEAKKMRR EVAAMEKEVA AMRVEKDQDA
601: RAKRFSNSKS PSNTAQILAG RAAGRSGGLT KSTQ
101: IKALRLSERQ REKAVEELTE ELTKLDEKLK LTESILESKN LEIKKINEEK KASMAAQFAA EATLRRVHAA QKDDDMPPIE AILAPLEAEL KLARSEIGKL
201: QEDNRALDRL TKSKEAALLE AERTVEAAMA KAAMVDDLQN KNQELMKQIE ICQEENKILD RMHRQKVAEV EKLTQTVREL EEAVLAGGAA ANAVRDYQRK
301: FQEMNEERKT LDRELARAKV TANRVATVVA NEWKDGNDKV MPVKQWLEER RFLQGEMQQL RDKLAITDRA AKSEAQLKEK FQLRLKVLEE TLRGTSSSAT
401: RNTPEARSMS NGPSRRQSLG GAENLQKFTS NGALSKKAPA SQMRHSLSIN STSVLKNAKG TSKSFDGGTR SVDRGKALLN GPGNYSFNKA TDDSKEAESG
501: NGWKENSEEK PQSEDPEAAT EDSVPGVLYD LLQKEVVSLR KASNEKDQSL KDKDDAIEML AKKVETLTKA MEVEAKKMRR EVAAMEKEVA AMRVEKDQDA
601: RAKRFSNSKS PSNTAQILAG RAAGRSGGLT KSTQ
Arabidopsis Description
ATMAP70-2microtubule-associated proteins 70-2 [Source:TAIR;Acc:AT1G24764]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.