Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH01966 | Soybean | mitochondrion | 73.12 | 74.29 |
| PGSC0003DMT400034592 | Potato | cytosol | 31.94 | 69.58 |
| KRH11576 | Soybean | cytosol | 66.32 | 66.55 |
| KRH36588 | Soybean | cytosol | 65.27 | 65.5 |
| VIT_00s0194g00260.t01 | Wine grape | cytosol | 59.51 | 58.39 |
| Solyc04g015010.2.1 | Tomato | cytosol | 48.69 | 57.29 |
| PGSC0003DMT400038827 | Potato | cytosol | 49.56 | 56.24 |
| AT4G17220.1 | Thale cress | cytosol | 49.74 | 55.56 |
| Bra026236.1-P | Field mustard | cytosol | 46.07 | 53.12 |
| CDX90483 | Canola | cytosol | 46.6 | 53.08 |
| CDY42967 | Canola | cytosol, nucleus, plasma membrane | 46.25 | 53.0 |
| CDY35590 | Canola | cytosol | 47.47 | 52.92 |
| CDY09638 | Canola | cytosol | 46.25 | 52.68 |
| GSMUA_Achr7P26720_001 | Banana | cytosol | 46.6 | 51.84 |
| Solyc11g012660.1.1 | Tomato | nucleus | 50.44 | 51.61 |
| KRH70354 | Soybean | endoplasmic reticulum | 46.77 | 43.79 |
| EER95273 | Sorghum | cytosol | 38.92 | 43.64 |
| KRH49658 | Soybean | cytosol | 46.42 | 43.54 |
| TraesCS4B01G245400.1 | Wheat | nucleus | 39.79 | 42.94 |
| KRH41720 | Soybean | cytosol | 45.72 | 42.53 |
| Zm00001d028219_P001 | Maize | cytosol | 37.87 | 42.47 |
| Os03t0215700-01 | Rice | cytosol | 38.05 | 42.33 |
| KRH60419 | Soybean | cytosol, plastid | 45.38 | 42.21 |
| KRG95100 | Soybean | nucleus | 42.76 | 41.74 |
| KRH66768 | Soybean | mitochondrion | 35.78 | 41.67 |
| HORVU4Hr1G067630.12 | Barley | nucleus | 37.0 | 40.38 |
| TraesCS4A01G078900.2 | Wheat | nucleus | 36.82 | 39.74 |
| TraesCS4D01G244000.1 | Wheat | nucleus | 35.43 | 38.23 |
Protein Annotations
| EntrezGene:100804225 | MapMan:35.1 | EMBL:ACUP02004730 | ncoils:Coil | EnsemblPlantsGene:GLYMA_07G267400 | GO:GO:0003674 |
| GO:GO:0005488 | GO:GO:0005515 | GO:GO:0007010 | GO:GO:0008017 | GO:GO:0008150 | GO:GO:0009987 |
| GO:GO:0016043 | UniProt:K7L400 | ProteinID:KRH51186.1 | EnsemblPlants:KRH51187 | ProteinID:KRH51187 | ProteinID:KRH51187.1 |
| InterPro:MAP70 | PFAM:PF07058 | PANTHER:PTHR31246 | PANTHER:PTHR31246:SF5 | UniParc:UPI0002965C22 | SEG:seg |
Description
hypothetical protein
Coordinates
chr7:+:44070132..44074348
Molecular Weight (calculated)
65365.1 Da
IEP (calculated)
9.402
GRAVY (calculated)
-0.851
Length
573 amino acids
Sequence
(BLAST)
(BLAST)
001: MVSCEDQYGE KLPLVQPDPV VLEINRLQNQ LKEKEKELAT CQGEIKALRS TEALKDKAIE ELRNGVSKLD ERLRITEDHL KQKNLEIKKL TDEKKNALAS
101: QYAAEATLRR VHANQKDEDF VPIERAIAPL EAEIKMYKNE ITALQEDKKA LERLTKLKES ALLEAERILR SALDRALVVE EVRNQNIDLK RQIEICQEEN
201: KLLEKNHRQK ILEVEKLSQT IQELEEVILA SGATANAVRD YQQQISELQE EKRTLERELA RVKVSTNRIA NAVANEWKDE NHKVMPVRQW LEERRIMQAE
301: IQRLKDKQAI SERTAKAESQ LKDKLKLRLK TLEEGLKHFS NNPITSNVSY ASQKAEKSNI LGFLTTSAGL RKRSTSQPRA CTVGSSLFQT PNIKNNRGDI
401: VAGNLKLGSP TKKYGSTENM LTKGIWASRS KVADNGEKEN EMQVNRDMTL NRCNDESEAT EIKTIVDVEE DPPESKKPKG SSRDDVVSGF LYDKLQKEVI
501: NLRKSCEIKD SSLQAKDEEI KMLIKKVGVL TKAMEVEWKK MKREAAAREK EASSTKSDDN RKNRSANSSK RAI
101: QYAAEATLRR VHANQKDEDF VPIERAIAPL EAEIKMYKNE ITALQEDKKA LERLTKLKES ALLEAERILR SALDRALVVE EVRNQNIDLK RQIEICQEEN
201: KLLEKNHRQK ILEVEKLSQT IQELEEVILA SGATANAVRD YQQQISELQE EKRTLERELA RVKVSTNRIA NAVANEWKDE NHKVMPVRQW LEERRIMQAE
301: IQRLKDKQAI SERTAKAESQ LKDKLKLRLK TLEEGLKHFS NNPITSNVSY ASQKAEKSNI LGFLTTSAGL RKRSTSQPRA CTVGSSLFQT PNIKNNRGDI
401: VAGNLKLGSP TKKYGSTENM LTKGIWASRS KVADNGEKEN EMQVNRDMTL NRCNDESEAT EIKTIVDVEE DPPESKKPKG SSRDDVVSGF LYDKLQKEVI
501: NLRKSCEIKD SSLQAKDEEI KMLIKKVGVL TKAMEVEWKK MKREAAAREK EASSTKSDDN RKNRSANSSK RAI
001: MTAAENPFVS DTSSLQSQLK EKEKELLAAK AEVEALRTNE ELKDRVFKEL RENVRKLEEK LGATENQVDQ KELERKKLEE EKEDALAAQD AAEEALRRVY
101: THQQDDDSLP LESIIAPLES QIKIHKHEIS ALQEDKKALE RLTKSKESAL LEAERILRSA LERALIVEEV QNHNFELRRQ IEICQDENKF LEKINRQKVL
201: EIEKLSQSIV ELEEAILAGG TAANAVRDYR RQISQLNDEK RTLERELARV KVSASRVALA VANEWKDEND RVMPVKQWLE ERRILHGEMQ KLKDKLAVSE
301: RTAKAESQLK ERLKLRLKTI EDGLKGPNTF FVSPTTKTEK SGKILGFLTS GGGSKKRSSS QLRGSVTGRI HAMNQPIDRV GESDEMENSK ITANGLTDQH
401: EEDSERKTEE DGNVYSEDMV SGFLYDRLQK EVIALRKLCE SKEGTINAKN EEIKMLLKKV DALTKAIEVE TKKAKREAAA REKENALAML NEESKLCRKA
501: KLPRSRIPNP RCQ
101: THQQDDDSLP LESIIAPLES QIKIHKHEIS ALQEDKKALE RLTKSKESAL LEAERILRSA LERALIVEEV QNHNFELRRQ IEICQDENKF LEKINRQKVL
201: EIEKLSQSIV ELEEAILAGG TAANAVRDYR RQISQLNDEK RTLERELARV KVSASRVALA VANEWKDEND RVMPVKQWLE ERRILHGEMQ KLKDKLAVSE
301: RTAKAESQLK ERLKLRLKTI EDGLKGPNTF FVSPTTKTEK SGKILGFLTS GGGSKKRSSS QLRGSVTGRI HAMNQPIDRV GESDEMENSK ITANGLTDQH
401: EEDSERKTEE DGNVYSEDMV SGFLYDRLQK EVIALRKLCE SKEGTINAKN EEIKMLLKKV DALTKAIEVE TKKAKREAAA REKENALAML NEESKLCRKA
501: KLPRSRIPNP RCQ
Arabidopsis Description
MAP70.5Microtubule-associated protein 70-5 [Source:UniProtKB/Swiss-Prot;Acc:Q8GYX3]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.