CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 6
nucleus 3

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
KRG91075
KRG93968
KRG94066
KRG95052
KRG95394
KRG95629
KRH01744
KRH02231
KRH02371
KRH02451
KRH06239
KRH07089
KRH08190
KRH12132
KRH16932
KRH28715
KRH32110
KRH33128
KRH33305
KRH35698
KRH37127
KRH37687
KRH46935
KRH47662
KRH48143
KRH50884
KRH52649
KRH53706
KRH58237
KRH61991
KRH66702
KRH67075
KRH67309
KRH69884
KRH71326
KRH71688
KRH72549
KRH76747

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT3G11590.1	KRH48143	AT1G31870.1	21798944
AT3G11590.1	KRG91075	AT1G49850.1	21798944
AT3G11590.1	KRH35698	AT1G49850.1	21798944
AT3G11590.1	KRH06239	AT1G54060.1	21798944
AT3G11590.1	KRH47662	AT1G54060.1	21798944
AT3G11590.1	KRG95394	AT2G19650.1	21798944
AT3G11590.1	KRH67075	AT2G19650.1	21798944
AT3G11590.1	KRG95629	AT2G30580.1	21798944
AT3G11590.1	KRH32110	AT2G30580.1	21798944
AT3G11590.1	KRH67309	AT2G30580.1	21798944
AT3G11590.1	KRH71326	AT2G30580.1	21798944
AT3G11590.1	KRH01744	AT2G43370.1	21798944
AT3G11590.1	KRH46935	AT2G43370.1	21798944
AT3G11590.1	KRG93968	AT3G01690.1	21798944
AT3G11590.1	KRH07089	AT3G01690.1	21798944
AT3G11590.1	KRH58237	AT3G01690.1	21798944
AT3G11590.1	KRH02371	AT3G06430.1	21798944
AT3G11590.1	KRH02451	AT3G06430.1	21798944
AT3G11590.1	KRH37687	AT3G06430.1	21798944
AT3G11590.1	KRH08190	AT3G50910.1	21798944
AT3G11590.1	KRH28715	AT3G50910.1	21798944
AT3G11590.1	KRH69884	AT3G50910.1	21798944
AT3G11590.1	KRH76747	AT3G50910.1	21798944
AT3G11590.1	KRG95052	AT3G56680.1	21798944
AT3G11590.1	KRH33128	AT3G56680.1	21798944
AT3G11590.1	KRH33305	AT3G56680.1	21798944
AT3G11590.1	KRH66702	AT3G56680.1	21798944
AT3G11590.1	KRH71688	AT3G56680.1	21798944
AT3G11590.1	KRH02231	AT4G15730.1	21798944
AT3G11590.1	KRH12132	AT4G15730.1	21798944
AT3G11590.1	KRH37127	AT4G15730.1	21798944
AT3G11590.1	KRH50884	AT4G15730.1	21798944
AT3G11590.1	KRG94066	AT4G32660.1	21798944
AT3G11590.1	KRH52649	AT4G32660.1	21798944
AT3G11590.1	KRH61991	AT4G32660.1	21798944
AT3G11590.1	KRH16932	AT5G05190.1	21798944
AT3G11590.1	KRH53706	AT5G05190.1	21798944
AT3G11590.1	KRH72549	AT5G05190.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRG96225	Soybean	nucleus	94.39	95.11
VIT_08s0007g02790.t01	Wine grape	plastid	69.39	69.6
CDY01038	Canola	plastid	57.58	62.3
CDY08511	Canola	plastid	57.58	61.79
Bra034827.1-P	Field mustard	plastid	57.27	61.56
AT3G11590.1	Thale cress	plastid	57.73	61.25
PGSC0003DMT400072353	Potato	plastid	59.09	59.54
Solyc10g083190.1.1	Tomato	plastid	58.18	58.09
Bra001412.1-P	Field mustard	nucleus	30.15	57.35
CDX73866	Canola	cytosol	30.45	54.47
CDY56601	Canola	cytosol, golgi, plastid	30.0	53.66
KRH25284	Soybean	plastid	41.67	41.73
KRH30384	Soybean	plastid	41.36	41.24
GSMUA_Achr6P16290_001	Banana	nucleus	33.18	35.49
GSMUA_Achr6P08260_001	Banana	nucleus	29.55	34.03
KRH20862	Soybean	cytosol	11.97	29.37
EES11990	Sorghum	nucleus	24.7	28.7
Os02t0506100-00	Rice	plastid	18.94	28.67
Zm00001d003996_P001	Maize	nucleus	24.7	28.65
TraesCS7B01G035800.1	Wheat	nucleus	25.0	28.55
Os04t0382800-00	Rice	nucleus	24.7	28.55
TraesCS7A01G134600.1	Wheat	nucleus	25.0	28.5
TraesCS7D01G134000.1	Wheat	nucleus	24.85	28.32
HORVU2Hr1G069400.8	Barley	nucleus	21.82	28.29
TraesCS2B01G299400.1	Wheat	nucleus, plastid	23.64	28.01
Zm00001d025208_P002	Maize	nucleus	24.7	27.82
TraesCS2A01G282200.1	Wheat	nucleus	23.79	27.74
TraesCS2D01G281000.1	Wheat	nucleus, plastid	23.48	27.39
KRH11424	Soybean	nucleus, plastid	15.3	26.23
KRH02074	Soybean	plastid	16.36	25.47
KXG30263	Sorghum	mitochondrion	23.48	24.92
KRH51081	Soybean	plastid	16.82	24.83
KRH77618	Soybean	nucleus	25.0	24.77
KRH73733	Soybean	nucleus	25.91	24.75
KRH14411	Soybean	nucleus	25.61	24.49
KRH46168	Soybean	nucleus	25.91	24.46
KRH27868	Soybean	nucleus	24.7	24.36
KRG98777	Soybean	nucleus	25.76	24.32
Zm00001d000402_P001	Maize	mitochondrion	20.0	24.09
KRH06548	Soybean	nucleus	21.97	22.0
KRG97105	Soybean	nucleus	21.21	21.77
KRH47994	Soybean	nucleus	21.52	21.65
KRH68854	Soybean	nucleus	18.94	21.08
KRH36516	Soybean	plastid	17.42	19.69
KRH11499	Soybean	plastid	18.03	17.71

Protein Annotations

EMBL:ACUP02002094	EnsemblPlants:KRH67971	EnsemblPlantsGene:GLYMA_03G199500	EntrezGene:100787903	ncoils:Coil	PANTHER:PTHR31071
PANTHER:PTHR31071:SF7	ProteinID:KRH67971	ProteinID:KRH67971.1	SEG:seg	UniParc:UPI000233979A	UniProt:I1JQ59
MapMan:35.1	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr3:+:40834100..40837901

Molecular Weight (calculated)

74436.7 Da

IEP (calculated)

9.974

GRAVY (calculated)

-0.963

Length

660 amino acids

Sequence
(BLAST)

001: MLSQNPNPTT MDMIPGKIRK RGCSSSASSS SSVLHNYRFK RTILVGKRGG SSTPVPTWKL MSSRSPLRAL ASPKYPPSQT GNKPRQAPVS ARKLAATLWE
101: MNEIPSPSPS VRSKKELRTR ERVPRSMRSG SLPPHLSDPS HSPVSERLDR SGTGSRQKRT PSISQGARIT EHHVGPLDSL SNVSLMEIET RSRAQTPASS
201: AVAVKARLKD VSNALMTSKE LLRIINRMWG HEDRPSSSMS LISALHTELE RARLQVNQLI QEQRSDQNEI NYLMKCFAEE KAAWKKKEEE IVEAAIESVA
301: GELDVERKLR RRLESLNKKL GRELADTKTS LLKVVKELES EKRAREIIEQ VCDELARDAD EDKSDIEKQK RVSTKVCEEV EKEKEIMQLT DRLREERAQK
401: KLSEAKYQLE EKNAAVDKLR NQLEAFLGGK QVREKSRSST HLSDEEIAAY LSRSRLGSHL IEDKEDDRGE VDNGVECEEE SAESDLHSIE LNMDNNNKSY
501: KWTYPPESRF DTRRYPIEEE VKGSRRSTSG KASRKSTSLQ RSISDGMEWG VQADKIQNSG DGIDWESFYE LEKQAQGKGY ADEMQGYKSV KGLRDQILAG
601: SRLASSRGYA SPTRQFSQPW PSRDLANNFQ ERPATAQGNG LKSRLGEARG EGQNVRKSKR

Best Arabidopsis Sequence Match ( AT3G11590.1 )
(BLAST)

001: MPRQNQSVEN LLLLGKIRKR GCSSPTSSTS SILREGYRFK RAIVVGKRGG STTPVPTWRL MGRSPSPRAS GALHAAASPS SHCGSKTGKV SAPAPVSARK
101: LAATLWEMNE MPSPRVVEEA APMIRKSRKE RIAPLPPPRS SVHSGSLPPH LSDPSHSPVS ERMERSGTGS RQRRASSTVQ KLRLGDCNVG ARDPINSGSF
201: MDIETRSRVE TPTGSTVGVK TRLKDCSNAL TTSKELLKII NRMWGQDDRP SSSMSLVSAL HSELERARLQ VNQLIHEHKP ENNDISYLMK RFAEEKAVWK
301: SNEQEVVEAA IESVAGELEV ERKLRRRFES LNKKLGKELA ETKSALMKAV KEIENEKRAR VMVEKVCDEL ARDISEDKAE VEELKRESFK VKEEVEKERE
401: MLQLADALRE ERVQMKLSEA KHQLEEKNAA VDKLRNQLQT YLKAKRCKEK TREPPQTQLH NEEAGDYLNH HISFGSYNIE DGEVENGNEE GSGESDLHSI
501: ELNIDNKSYK WPYGEENRGR KSTPRKSLSL QRSISDCVDW VVQSEKLQKS GDGGLDWGRS IDVEPKGYID ETQAYKPNKA SSKDHHILSG SRLSNFRGGS
601: VSKSRLSDAS KGENQNARKS RW

Arabidopsis Description

At3g11590/F24K9_26 [Source:UniProtKB/TrEMBL;Acc:Q9CAW9]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.