Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
nucleus:
21132161
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| HORVU7Hr1G104590.1 | Barley | cytosol | 10.04 | 68.67 |
| VIT_02s0012g00850.t01 | Wine grape | nucleus | 52.29 | 61.88 |
| CDY69127 | Canola | cytosol | 6.69 | 61.29 |
| HORVU7Hr1G017260.9 | Barley | cytosol | 10.21 | 59.79 |
| GSMUA_AchrUn_... | Banana | nucleus | 50.0 | 52.5 |
| Bra033870.1-P | Field mustard | nucleus | 50.53 | 52.37 |
| CDY35525 | Canola | nucleus | 50.88 | 52.36 |
| PGSC0003DMT400058162 | Potato | nucleus | 52.29 | 52.01 |
| Solyc03g033950.2.1 | Tomato | nucleus | 44.19 | 51.54 |
| AT1G31870.1 | Thale cress | nucleus | 50.18 | 50.8 |
| CDY29914 | Canola | nucleus, vacuole | 50.0 | 47.41 |
| Zm00001d048133_P001 | Maize | nucleus | 44.19 | 47.27 |
| Os08t0178300-01 | Rice | nucleus | 44.89 | 46.2 |
| KXG19224 | Sorghum | nucleus | 46.13 | 44.26 |
| TraesCS7D01G070100.1 | Wheat | nucleus | 43.31 | 43.62 |
| TraesCS4A01G372400.1 | Wheat | nucleus | 44.01 | 43.4 |
| HORVU7Hr1G073780.1 | Barley | mitochondrion | 42.96 | 39.67 |
Protein Annotations
| EMBL:ACUP02004208 | EnsemblPlants:KRH48143 | EnsemblPlantsGene:GLYMA_07G070900 | EntrezGene:100783213 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005634 | GO:GO:0005737 | GO:GO:0005829 | InterPro:Bud13 | ncoils:Coil |
| PFAM:PF09736 | ProteinID:KRH48143 | ProteinID:KRH48143.1 | SEG:seg | UniParc:UPI0002338AD2 | UniProt:I1KIA7 |
| MapMan:16.4.5.2.10 | : | : | : | : | : |
Description
hypothetical protein
Coordinates
chr7:-:6443135..6449037
Molecular Weight (calculated)
64835.1 Da
IEP (calculated)
10.351
GRAVY (calculated)
-1.335
Length
568 amino acids
Sequence
(BLAST)
(BLAST)
001: MGSNSLKDYL KRYESNTEEE KKKNKKKKQK KKSQPQATGL LVVDEDPTWQ KPIDLGEENN DNSSDEEKPL IDEDIEVKRM KRLEQVRARR PYHAISEDGS
101: GWVSLSSNSE NPINSINDMS PPRKRKGADL SPHQQLKRND TPSPDYGTSD LQDISPPRRR GRHDSPSQDA LHGSVASDLS PPRKIQKNAP RPGLSNISHS
201: RSPQHLSPPR RGRHDYETSD LQDISPPRRG RHDSPSEDVS HRSVASDLSP PRKNQKKVER LGLSDLSHRH SPQDLSPPRR GRHDSPSRDA LHGSSVSDLS
301: PPRKIQKNVA RLGSSDLSRH RSPSPSVKVV SHPSLDRDLS PPRKNPKELS NPAGKTGLIS GKDIRDEIDR KKRDDMLRFK QMDPSISGRG AEPVYRDKVK
401: GVRISKEEYL KSKQKVEEKP KEIEIEWGKG LAQKREAEAR LKELELEKEK PFARTRDDPE LDKMLKERLR WGDPMAHLVK KKYPEPVLPN LGENEKMKES
501: GFVIPQDIPN HSWLKRGLDA APNRYGIRPG RHWDGVDRSN GFEKDMFKRT NEKQARDREA YLWSVSDM
101: GWVSLSSNSE NPINSINDMS PPRKRKGADL SPHQQLKRND TPSPDYGTSD LQDISPPRRR GRHDSPSQDA LHGSVASDLS PPRKIQKNAP RPGLSNISHS
201: RSPQHLSPPR RGRHDYETSD LQDISPPRRG RHDSPSEDVS HRSVASDLSP PRKNQKKVER LGLSDLSHRH SPQDLSPPRR GRHDSPSRDA LHGSSVSDLS
301: PPRKIQKNVA RLGSSDLSRH RSPSPSVKVV SHPSLDRDLS PPRKNPKELS NPAGKTGLIS GKDIRDEIDR KKRDDMLRFK QMDPSISGRG AEPVYRDKVK
401: GVRISKEEYL KSKQKVEEKP KEIEIEWGKG LAQKREAEAR LKELELEKEK PFARTRDDPE LDKMLKERLR WGDPMAHLVK KKYPEPVLPN LGENEKMKES
501: GFVIPQDIPN HSWLKRGLDA APNRYGIRPG RHWDGVDRSN GFEKDMFKRT NEKQARDREA YLWSVSDM
001: MAGNQSLKDY LKKYESSDVV EKKKKKKKQK KPSKPEPRGV LVVDEDPVWQ KQVDPEEDEN EDDSAEETPL VDEDIEVKRM RRLEEIKARR AHNAIAEDGS
101: GWVTLPLNRE DTQSNISPPR RQRTRNDSPS PEPGPRRSVA DRVDTDMSPP RRRKRHNSPS PEPNRKHTKP VSLDSDMSPP RKRKARNDSP SPEPEAKYLS
201: EDLSPPRRRH VHSPSRESSR KRSDSVELDD DLSPPRRKRD LHGSPVSDVK KKSNDLSPPR RRRYHSPSPE PARRSSKSFG SNADLSPPGR NINMKDSQDS
301: DLSPQRKAAD LRRSSENVSR SSNFDSSPPR RPRRDSSPPQ ISKEQRKTGL ISGKDIGSEY RKKKEDEKLR FKNMDSELTG QNAEAVFRDK ITGKRISKEE
401: YLKSKQKKVI EKPKEIKLEW GKGLAQKREA EARLQELELE KDKPFARTRD DPELDQMMKE RVRFGDPMAH LVKKRKYETT LVDLGDDEEM KKSGFIIPQS
501: VPKHSWLTRR LEAASNRYGI KPGRHWDGVD RSNGTEKDLI KKTNERKATE IEAYLWSVAD M
101: GWVTLPLNRE DTQSNISPPR RQRTRNDSPS PEPGPRRSVA DRVDTDMSPP RRRKRHNSPS PEPNRKHTKP VSLDSDMSPP RKRKARNDSP SPEPEAKYLS
201: EDLSPPRRRH VHSPSRESSR KRSDSVELDD DLSPPRRKRD LHGSPVSDVK KKSNDLSPPR RRRYHSPSPE PARRSSKSFG SNADLSPPGR NINMKDSQDS
301: DLSPQRKAAD LRRSSENVSR SSNFDSSPPR RPRRDSSPPQ ISKEQRKTGL ISGKDIGSEY RKKKEDEKLR FKNMDSELTG QNAEAVFRDK ITGKRISKEE
401: YLKSKQKKVI EKPKEIKLEW GKGLAQKREA EARLQELELE KDKPFARTRD DPELDQMMKE RVRFGDPMAH LVKKRKYETT LVDLGDDEEM KKSGFIIPQS
501: VPKHSWLTRR LEAASNRYGI KPGRHWDGVD RSNGTEKDLI KKTNERKATE IEAYLWSVAD M
Arabidopsis Description
AT1G31870 protein [Source:UniProtKB/TrEMBL;Acc:Q9C6S8]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.