Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY35525 | Canola | nucleus | 98.36 | 97.64 |
| AT1G31870.1 | Thale cress | nucleus | 79.93 | 78.07 |
| HORVU7Hr1G104590.1 | Barley | cytosol | 9.67 | 63.86 |
| VIT_02s0012g00850.t01 | Wine grape | nucleus | 49.45 | 56.46 |
| HORVU7Hr1G017260.9 | Barley | cytosol | 9.85 | 55.67 |
| Solyc03g033950.2.1 | Tomato | nucleus | 45.44 | 51.13 |
| PGSC0003DMT400058162 | Potato | nucleus | 53.1 | 50.96 |
| KRH48143 | Soybean | nucleus | 52.37 | 50.53 |
| GSMUA_AchrUn_... | Banana | nucleus | 49.82 | 50.46 |
| Zm00001d048133_P001 | Maize | nucleus | 45.26 | 46.7 |
| Os08t0178300-01 | Rice | nucleus | 46.9 | 46.56 |
| TraesCS7D01G070100.1 | Wheat | nucleus | 45.44 | 44.15 |
| KXG19224 | Sorghum | nucleus | 46.72 | 43.24 |
| TraesCS4A01G372400.1 | Wheat | nucleus | 45.07 | 42.88 |
| HORVU7Hr1G073780.1 | Barley | mitochondrion | 45.26 | 40.33 |
Protein Annotations
| EnsemblPlants:Bra033870.1 | EnsemblPlants:Bra033870.1-P | EnsemblPlantsGene:Bra033870 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005634 | GO:GO:0005737 | GO:GO:0005829 | InterPro:Bud13 | PFAM:PF09736 | SEG:seg |
| UniParc:UPI0002548146 | UniProt:M4EYH8 | MapMan:16.4.5.2.10 | : | : | : |
Description
AT1G31870 (E=5e-197) | unknown protein
Coordinates
chrA05:-:14659616..14661958
Molecular Weight (calculated)
62747.6 Da
IEP (calculated)
10.449
GRAVY (calculated)
-1.410
Length
548 amino acids
Sequence
(BLAST)
(BLAST)
001: MAASRTGVKS MKDYLKKYES SEVIEKKKKK PSKPEPTGVL VVDEDPVWQK QVDPHEEDNE NYSAEERPVV DEDIEVKRMR RLEEIKARRA QNAIAEDGSG
101: WVSLSSDPQR SDDISPPRRH RTRNDSPSPE PGGSRGSLPE TDMSPPRRRK RHYTPSPEPN RLHAKPVSLD SDLTPPRKRR ARNDSPSPEP EDPAPKSLGE
201: DLSPPRKRRV HPVSPERSRK RSDSLELDGD LSPPRRKKDS LVSDVNKRSN DLSPPRRRRY HSPSPEPGRR PSKSLGSNSD LSPPRRSVSV KGSRDSDLSP
301: QRKPVSRSSN FDSSPPRRPR RESPPPQTSK EQRKTGLISG KDIGSEYRKK KQDEQLRFKN MDSELTGQNA EAVFRDKITG KRISKEEYLQ SKQKKVIEKP
401: KEIKLEWGQG LAQKRDAEAR LQELELEKDK PFARTRDDPE LDQMMKERVR WGDPMAHLVK KKQYEAPLMD LGDNEEMKKS GFVIPQSIPK HSWITRGLEA
501: APNRYGIKPG RHWDGVDRST GHEKDRFKKT SEKKATESEA YLWSVADM
101: WVSLSSDPQR SDDISPPRRH RTRNDSPSPE PGGSRGSLPE TDMSPPRRRK RHYTPSPEPN RLHAKPVSLD SDLTPPRKRR ARNDSPSPEP EDPAPKSLGE
201: DLSPPRKRRV HPVSPERSRK RSDSLELDGD LSPPRRKKDS LVSDVNKRSN DLSPPRRRRY HSPSPEPGRR PSKSLGSNSD LSPPRRSVSV KGSRDSDLSP
301: QRKPVSRSSN FDSSPPRRPR RESPPPQTSK EQRKTGLISG KDIGSEYRKK KQDEQLRFKN MDSELTGQNA EAVFRDKITG KRISKEEYLQ SKQKKVIEKP
401: KEIKLEWGQG LAQKRDAEAR LQELELEKDK PFARTRDDPE LDQMMKERVR WGDPMAHLVK KKQYEAPLMD LGDNEEMKKS GFVIPQSIPK HSWITRGLEA
501: APNRYGIKPG RHWDGVDRST GHEKDRFKKT SEKKATESEA YLWSVADM
001: MAGNQSLKDY LKKYESSDVV EKKKKKKKQK KPSKPEPRGV LVVDEDPVWQ KQVDPEEDEN EDDSAEETPL VDEDIEVKRM RRLEEIKARR AHNAIAEDGS
101: GWVTLPLNRE DTQSNISPPR RQRTRNDSPS PEPGPRRSVA DRVDTDMSPP RRRKRHNSPS PEPNRKHTKP VSLDSDMSPP RKRKARNDSP SPEPEAKYLS
201: EDLSPPRRRH VHSPSRESSR KRSDSVELDD DLSPPRRKRD LHGSPVSDVK KKSNDLSPPR RRRYHSPSPE PARRSSKSFG SNADLSPPGR NINMKDSQDS
301: DLSPQRKAAD LRRSSENVSR SSNFDSSPPR RPRRDSSPPQ ISKEQRKTGL ISGKDIGSEY RKKKEDEKLR FKNMDSELTG QNAEAVFRDK ITGKRISKEE
401: YLKSKQKKVI EKPKEIKLEW GKGLAQKREA EARLQELELE KDKPFARTRD DPELDQMMKE RVRFGDPMAH LVKKRKYETT LVDLGDDEEM KKSGFIIPQS
501: VPKHSWLTRR LEAASNRYGI KPGRHWDGVD RSNGTEKDLI KKTNERKATE IEAYLWSVAD M
101: GWVTLPLNRE DTQSNISPPR RQRTRNDSPS PEPGPRRSVA DRVDTDMSPP RRRKRHNSPS PEPNRKHTKP VSLDSDMSPP RKRKARNDSP SPEPEAKYLS
201: EDLSPPRRRH VHSPSRESSR KRSDSVELDD DLSPPRRKRD LHGSPVSDVK KKSNDLSPPR RRRYHSPSPE PARRSSKSFG SNADLSPPGR NINMKDSQDS
301: DLSPQRKAAD LRRSSENVSR SSNFDSSPPR RPRRDSSPPQ ISKEQRKTGL ISGKDIGSEY RKKKEDEKLR FKNMDSELTG QNAEAVFRDK ITGKRISKEE
401: YLKSKQKKVI EKPKEIKLEW GKGLAQKREA EARLQELELE KDKPFARTRD DPELDQMMKE RVRFGDPMAH LVKKRKYETT LVDLGDDEEM KKSGFIIPQS
501: VPKHSWLTRR LEAASNRYGI KPGRHWDGVD RSNGTEKDLI KKTNERKATE IEAYLWSVAD M
Arabidopsis Description
AT1G31870 protein [Source:UniProtKB/TrEMBL;Acc:Q9C6S8]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.