Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- plastid 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| HORVU7Hr1G104590.1 | Barley | cytosol | 11.15 | 79.52 |
| Zm00001d048133_P001 | Maize | nucleus | 69.93 | 77.97 |
| Os08t0178300-01 | Rice | nucleus | 68.92 | 73.91 |
| TraesCS7D01G070100.1 | Wheat | nucleus | 66.05 | 69.33 |
| HORVU7Hr1G017260.9 | Barley | cytosol | 11.32 | 69.07 |
| TraesCS4A01G372400.1 | Wheat | nucleus | 66.39 | 68.23 |
| CDY69127 | Canola | cytosol | 6.59 | 62.9 |
| HORVU7Hr1G073780.1 | Barley | mitochondrion | 62.5 | 60.16 |
| GSMUA_AchrUn_... | Banana | nucleus | 48.48 | 53.05 |
| VIT_02s0012g00850.t01 | Wine grape | nucleus | 42.4 | 52.29 |
| PGSC0003DMT400058162 | Potato | nucleus | 45.27 | 46.94 |
| CDY35525 | Canola | nucleus | 43.75 | 46.92 |
| Bra033870.1-P | Field mustard | nucleus | 43.24 | 46.72 |
| AT1G31870.1 | Thale cress | nucleus | 44.26 | 46.7 |
| Solyc03g033950.2.1 | Tomato | nucleus | 38.18 | 46.41 |
| KRH48143 | Soybean | nucleus | 44.26 | 46.13 |
| CDY29914 | Canola | nucleus, vacuole | 43.58 | 43.07 |
Protein Annotations
| EnsemblPlants:KXG19224 | EnsemblPlantsGene:SORBI_3010G026400 | InterPro:Bud13 | ncoils:Coil | PFAM:PF09736 | ProteinID:KXG19224 |
| ProteinID:KXG19224.1 | SEG:seg | UniParc:UPI0007F1C670 | UniProt:A0A194YGX6 | MapMan:16.4.5.2.10 | : |
Description
hypothetical protein
Coordinates
chr10:-:2137552..2142233
Molecular Weight (calculated)
67278.9 Da
IEP (calculated)
10.419
GRAVY (calculated)
-1.453
Length
592 amino acids
Sequence
(BLAST)
(BLAST)
001: MAARQPPPSS ASAPAAGLSM KEYLKRYQSG PGADGDQKKA KKKTKKKPKP TAGGGGVLIV DEDPVWQKPV QVEEEPASSG DEKPLVDEDI EVKRMRRLEA
101: IRAARPYNAI AEDGSGWVTV AAPEEQGGGS TRQLRNDTPS PEQGGAVRED LSPVRRRQRR DTPSPVQGDA AGKDLSPPRQ RRRRQDTPSP KGSGAGDQDD
201: MSPPRKSRRK KDPSPPRKGA RHISEEPQDT SPPRRRRRHD SEEPQDTLLP RRRVRHDSVE SEDISPPRRR TRQDSEGPED ISPPRRSKHQ DPEDISPPRR
301: RKHQDPEDIS PPRRRKHQDP EDISPPRRRT HQDPDGDLSP PRRNNLGQSH KSATDELSPR KKRDTSPSRN SKKERASKHV MKAGLMTAEE VKEDIRKIKE
401: TEMAKFASQD PSLVGKGAKA VFRDKEGRRI SEEEMRKAKE PEKPKEIHIE WGKGLVQKRE AEARLKEIEA EKKKPFARTR DDPELDNMLK ERIRWGDPMA
501: HLVKRKDPEF ILEDLGDDEK MKESGFIVPQ NVPPHSWLKR GVDAPPNRYG IKPGRHWDGV DRSNGFEKDM FKLKNEKQAM EQEAYLWSVS DM
101: IRAARPYNAI AEDGSGWVTV AAPEEQGGGS TRQLRNDTPS PEQGGAVRED LSPVRRRQRR DTPSPVQGDA AGKDLSPPRQ RRRRQDTPSP KGSGAGDQDD
201: MSPPRKSRRK KDPSPPRKGA RHISEEPQDT SPPRRRRRHD SEEPQDTLLP RRRVRHDSVE SEDISPPRRR TRQDSEGPED ISPPRRSKHQ DPEDISPPRR
301: RKHQDPEDIS PPRRRKHQDP EDISPPRRRT HQDPDGDLSP PRRNNLGQSH KSATDELSPR KKRDTSPSRN SKKERASKHV MKAGLMTAEE VKEDIRKIKE
401: TEMAKFASQD PSLVGKGAKA VFRDKEGRRI SEEEMRKAKE PEKPKEIHIE WGKGLVQKRE AEARLKEIEA EKKKPFARTR DDPELDNMLK ERIRWGDPMA
501: HLVKRKDPEF ILEDLGDDEK MKESGFIVPQ NVPPHSWLKR GVDAPPNRYG IKPGRHWDGV DRSNGFEKDM FKLKNEKQAM EQEAYLWSVS DM
001: MAGNQSLKDY LKKYESSDVV EKKKKKKKQK KPSKPEPRGV LVVDEDPVWQ KQVDPEEDEN EDDSAEETPL VDEDIEVKRM RRLEEIKARR AHNAIAEDGS
101: GWVTLPLNRE DTQSNISPPR RQRTRNDSPS PEPGPRRSVA DRVDTDMSPP RRRKRHNSPS PEPNRKHTKP VSLDSDMSPP RKRKARNDSP SPEPEAKYLS
201: EDLSPPRRRH VHSPSRESSR KRSDSVELDD DLSPPRRKRD LHGSPVSDVK KKSNDLSPPR RRRYHSPSPE PARRSSKSFG SNADLSPPGR NINMKDSQDS
301: DLSPQRKAAD LRRSSENVSR SSNFDSSPPR RPRRDSSPPQ ISKEQRKTGL ISGKDIGSEY RKKKEDEKLR FKNMDSELTG QNAEAVFRDK ITGKRISKEE
401: YLKSKQKKVI EKPKEIKLEW GKGLAQKREA EARLQELELE KDKPFARTRD DPELDQMMKE RVRFGDPMAH LVKKRKYETT LVDLGDDEEM KKSGFIIPQS
501: VPKHSWLTRR LEAASNRYGI KPGRHWDGVD RSNGTEKDLI KKTNERKATE IEAYLWSVAD M
101: GWVTLPLNRE DTQSNISPPR RQRTRNDSPS PEPGPRRSVA DRVDTDMSPP RRRKRHNSPS PEPNRKHTKP VSLDSDMSPP RKRKARNDSP SPEPEAKYLS
201: EDLSPPRRRH VHSPSRESSR KRSDSVELDD DLSPPRRKRD LHGSPVSDVK KKSNDLSPPR RRRYHSPSPE PARRSSKSFG SNADLSPPGR NINMKDSQDS
301: DLSPQRKAAD LRRSSENVSR SSNFDSSPPR RPRRDSSPPQ ISKEQRKTGL ISGKDIGSEY RKKKEDEKLR FKNMDSELTG QNAEAVFRDK ITGKRISKEE
401: YLKSKQKKVI EKPKEIKLEW GKGLAQKREA EARLQELELE KDKPFARTRD DPELDQMMKE RVRFGDPMAH LVKKRKYETT LVDLGDDEEM KKSGFIIPQS
501: VPKHSWLTRR LEAASNRYGI KPGRHWDGVD RSNGTEKDLI KKTNERKATE IEAYLWSVAD M
Arabidopsis Description
AT1G31870 protein [Source:UniProtKB/TrEMBL;Acc:Q9C6S8]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.