CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome

Predictor Summary:

cytosol 2
plastid 1
peroxisome 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	peroxisome
Any Predictor:	cytosol, mitochondrion, peroxisome, plastid
BaCelLo:	cytosol
iPSORT:	plastid
MultiLoc:	peroxisome
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	peroxisome

PPI

Inferred distinct locusB in Crop

locusB	locations
EER89414
EER91632
EER95306
EER95442
EER97233
EES00535
EES02888
EES04915
EES09230
EES17768
EES18909
KXG24163
KXG28657
KXG32223
KXG37189
OQU79120
OQU79799

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT2G23420.1	OQU79799	AT1G12310.1	21798944
AT2G23420.1	EES00535	AT1G14640.1	21798944
AT2G23420.1	KXG32223	AT1G14640.1	21798944
AT2G23420.1	EER89414	AT1G49590.1	21798944
AT2G23420.1	EES09230	AT1G50450.1	21798944
AT2G23420.1	KXG28657	AT1G50450.1	21798944
AT2G23420.1	OQU79120	AT1G50450.1	21798944
AT2G23420.1	EER91632	AT1G55270.1	21798944
AT2G23420.1	EER95442	AT1G55270.1	21798944
AT2G23420.1	EER97233	AT3G16250.1	21798944
AT2G23420.1	KXG24163	AT3G26420.1	21798944
AT2G23420.1	KXG37189	AT3G26420.1	21798944
AT2G23420.1	EES18909	AT3G55260.1	21798944
AT2G23420.1	EES02888	AT3G62250.1	21798944
AT2G23420.1	EES17768	AT3G62250.1	21798944
AT2G23420.1	EES04915	AT4G32750.1	21798944
AT2G23420.1	EER95306	AT4G33920.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d034777_P005	Maize	cytosol	93.29	94.79
Os03t0837300-02	Rice	plasma membrane	88.16	89.11
TraesCS4A01G354500.1	Wheat	peroxisome	86.22	84.58
TraesCS5B01G517900.3	Wheat	peroxisome	86.04	84.4
TraesCS5D01G517600.1	Wheat	peroxisome	85.87	84.23
GSMUA_Achr11P...	Banana	cytosol	76.15	83.2
KRH04597	Soybean	cytosol	60.95	81.37
Solyc02g093290.2.1	Tomato	cytosol, extracellular, nucleus	79.33	80.47
PGSC0003DMT400010254	Potato	cytosol	79.33	80.47
KRH57934	Soybean	cytosol, nucleus	77.56	78.82
VIT_07s0031g00460.t01	Wine grape	cytosol	78.09	78.79
CDY63965	Canola	cytosol	71.38	77.69
Bra017808.1-P	Field mustard	cytosol	72.08	77.57
CDY66512	Canola	cytosol	76.15	77.52
KXG26318	Sorghum	cytosol, plastid	77.74	77.19
CDY29537	Canola	cytosol	76.5	77.05
AT2G23420.1	Thale cress	cytosol	75.8	77.02
AT4G36940.1	Thale cress	cytosol	75.97	76.92
CDY46076	Canola	cytosol	75.44	76.8
Bra039198.1-P	Field mustard	cytosol	75.44	76.8
Solyc03g044430.2.1	Tomato	cytosol	75.62	75.62
KRH77015	Soybean	cytosol	73.14	74.19
KRH63322	Soybean	extracellular	9.36	63.86
KRH28456	Soybean	extracellular	19.79	59.26

Protein Annotations

KEGG:00760+6.3.4.21	Gene3D:3.20.140.10	Gene3D:3.20.20.70	MapMan:7.9.2.2	EntrezGene:8080183	UniProt:A0A1Z5S4J4
InterPro:Aldolase_TIM	GO:GO:0003674	GO:GO:0003824	GO:GO:0004514	GO:GO:0004516	GO:GO:0006139
GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009435	GO:GO:0009987	GO:GO:0016740
GO:GO:0019358	InterPro:IPR013785	InterPro:Nic_PRibTrfase-Fam	InterPro:Nic_PRibTrfase_pncB	InterPro:Nicotinate_pribotase_like_C	EnsemblPlants:OQU90665
ProteinID:OQU90665	ProteinID:OQU90665.1	PFAM:PF04095	PIRSF:PIRSF000484	PANTHER:PTHR11098	PANTHER:PTHR11098:SF17
EnsemblPlantsGene:SORBI_3001G021000	SUPFAM:SSF51690	SUPFAM:SSF54675	unigene:Sbi.3487	TIGRFAMs:TIGR01513	UniParc:UPI000B8BA120

Description

hypothetical protein

Coordinates

chr1:-:1729993..1737720

Molecular Weight (calculated)

63166.8 Da

IEP (calculated)

7.141

GRAVY (calculated)

-0.123

Length

566 amino acids

Sequence
(BLAST)

001: MAAANGDASH GGGGVPRPTN PMVTPLLTDL YQFTMAYAYW KAGKHLDRAV FDLYFRKSPF GGEFTIFGGL EECIRFIANF KFTEDEIKFL RSVMPTCEDG
101: FFEYLRSIDC SDVEVYAIPE GYVVFPKVPL MRIEGPVAVV QLLETPFLSL VNYASLVTTN AARHRLVAGK SKNLLEFGLR RAQGPDGGIS ASRYCYMGGF
201: DATSNVAAGR LFGIPIRGTH SHAFVSSFMG LDEITNKALT SSDGSKKCED FVSLVQNWLI RIQSRSIICY SQESSSLHGT FGETSQSELA AFTSYALAFP
301: NSFLALVDTY DVMRSGVPNF CAVALALNDM GYKAVGIRLD SGDLAYLSIE TRKFFRAIEK EFGVVGFEKT RITASNDLNE ETIDALNKQG HEVDAFGIGT
401: NLVTCYAQAA LGCVFKLVEI NKQPRIKLSE DVSKVSIPCK KKCYRLYGKE GYPLVDIMTG EDEPGPKIGE RLLCRHPFNE SKRAYVVPQH VEELLRCYWP
501: GTSSNPREVL PSIHEIRTRC IHHLDRMRPD HMRRLNPTPY KVSVSTKLYD FIHFLWLNEA PVGELQ

Best Arabidopsis Sequence Match ( AT4G36940.1 )
(BLAST)

001: MEKKENGLDG KQSGRVINGP TNPMVTPLLN DLYQFTMAYA YWKAGKQSER SVFDLYFRKN PFGGEYTIFA GLEECIKFLA NFNLTDEEID FVRDSLPGCE
101: EAFCDYLRGL DCSDIEVYAI SEGSVVFPKV PLLRIEGPVA VVQLLETPFL NLINYASLVA TNAARHRFVA GKSKLLLEFG ARRAQGPDGA ISASKYCYLG
201: GFDATSNVAA GKLFGIPLRG THSHAFVSSF MSLDEIVDKV LRSSDGKSTC KDFICLVQTC LTKIQNSSSL QGIFSETNQS ELAAFISYAL AFPNSFLALV
301: DTYDVMKSGI PNFCAVALAL NELGYKAVGI RLDSGDLAYL STEVRKFFCA IERDLKVPDF GKMIVTASND LNEETVDALN KQGHEVDAFG IGTNLVTCYA
401: QAALGCVFKL VEINNQPRIK LSEDVTKVSI PCKKRTYRLF GKEGYPLVDI MTGENEPPPK VGERLLCRHP FNESKRAYVV PQRVEELLKC YWRGNADEAR
501: EELEPLKELR NRCIKQLENM RPDHMRRLNP TPYKVSVSAK LYDFIHFLWL NEAPVGELH

Arabidopsis Description

NAPRT1NAPRT1 [Source:UniProtKB/TrEMBL;Acc:A0A178V5W0]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.