Factsheet for VIT_07s0031g00460.t01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
plastid 1
mitochondrion 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, peroxisome, plastid
BaCelLo:	cytosol
MultiLoc:	cytosol
Plant-mPloc:	plastid
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	peroxisome

PPI

Inferred distinct locusB in Crop

locusB	locations
VIT_01s0011g02040.t01
VIT_01s0011g05140.t01
VIT_02s0241g00140.t01
VIT_03s0063g00890.t01
VIT_03s0091g00470.t01
VIT_04s0008g03740.t01
VIT_06s0004g00860.t01
VIT_06s0061g00080.t01
VIT_07s0005g02160.t01
VIT_07s0129g00520.t01
VIT_08s0032g00900.t01
VIT_09s0002g04010.t01
VIT_12s0034g00630.t01
VIT_13s0019g00040.t01
VIT_17s0119g00050.t01
VIT_18s0001g09390.t01
VIT_18s0166g00180.t01

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT2G23420.1	VIT_02s0241g00140.t01	AT1G12310.1	21798944
AT2G23420.1	VIT_01s0011g02040.t01	AT1G14640.1	21798944
AT2G23420.1	VIT_03s0063g00890.t01	AT1G49590.1	21798944
AT2G23420.1	VIT_06s0061g00080.t01	AT1G50450.1	21798944
AT2G23420.1	VIT_06s0004g00860.t01	AT1G55270.1	21798944
AT2G23420.1	VIT_12s0034g00630.t01	AT3G06330.1	21798944
AT2G23420.1	VIT_09s0002g04010.t01	AT3G16250.1	21798944
AT2G23420.1	VIT_18s0166g00180.t01	AT3G26420.1	21798944
AT2G23420.1	VIT_13s0019g00040.t01	AT3G55260.1	21798944
AT2G23420.1	VIT_07s0005g02160.t01	AT3G62250.1	21798944
AT2G23420.1	VIT_08s0032g00900.t01	AT3G62250.1	21798944
AT2G23420.1	VIT_17s0119g00050.t01	AT3G62250.1	21798944
AT2G23420.1	VIT_01s0011g05140.t01	AT4G14060.1	21798944
AT2G23420.1	VIT_04s0008g03740.t01	AT4G32750.1	21798944
AT2G23420.1	VIT_03s0091g00470.t01	AT4G33920.1	21798944
AT2G23420.1	VIT_07s0129g00520.t01	AT4G33920.1	21798944
AT2G23420.1	VIT_18s0001g09390.t01	AT4G33920.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH04597	Soybean	cytosol	65.78	87.03
GSMUA_Achr11P...	Banana	cytosol	78.61	85.14
GSMUA_Achr2P08220_001	Banana	cytosol	81.28	85.07
KRH57934	Soybean	cytosol, nucleus	83.96	84.56
PGSC0003DMT400010254	Potato	cytosol	83.42	83.87
Solyc02g093290.2.1	Tomato	cytosol, extracellular, nucleus	83.07	83.51
Bra017808.1-P	Field mustard	cytosol	77.54	82.7
AT2G23420.1	Thale cress	cytosol	82.0	82.59
CDY63965	Canola	cytosol	76.11	82.12
AT4G36940.1	Thale cress	cytosol	81.82	82.11
Bra039198.1-P	Field mustard	cytosol	81.28	82.01
CDY46076	Canola	cytosol	81.28	82.01
CDY66512	Canola	cytosol	81.11	81.83
CDY29537	Canola	cytosol	81.64	81.49
Solyc03g044430.2.1	Tomato	cytosol	81.28	80.57
Zm00001d034777_P005	Maize	cytosol	79.86	80.43
Os03t0837300-02	Rice	plasma membrane	79.32	79.46
Os04t0429800-01	Rice	plasma membrane, plastid	78.79	78.51
KRH77015	Soybean	cytosol	77.9	78.32
OQU90665	Sorghum	peroxisome	78.79	78.09
TraesCS4A01G354500.1	Wheat	peroxisome	79.68	77.47
Zm00001d003674_P001	Maize	extracellular	37.25	77.41
KXG26318	Sorghum	cytosol, plastid	78.43	77.19
TraesCS5B01G517900.3	Wheat	peroxisome	79.32	77.12
TraesCS2D01G301100.1	Wheat	golgi	77.72	77.03
TraesCS5D01G517600.1	Wheat	peroxisome	79.14	76.95
TraesCS2B01G318300.2	Wheat	cytosol, peroxisome, plastid	77.54	76.86
TraesCS2A01G302400.1	Wheat	cytosol, peroxisome, plastid	77.54	76.86
KRH63322	Soybean	extracellular	10.16	68.67
Zm00001d003675_P001	Maize	plastid	27.27	68.61
Zm00001d025412_P001	Maize	plastid	77.9	67.86
KRH28456	Soybean	extracellular	21.03	62.43
HORVU2Hr1G074990.1	Barley	plastid	4.99	26.67

Protein Annotations

KEGG:00760+6.3.4.21	EntrezGene:100249147	wikigene:100249147	Gene3D:3.20.140.10	Gene3D:3.20.20.70	MapMan:7.9.2.2
InterPro:Aldolase_TIM	ProteinID:CCB47060	ProteinID:CCB47060.1	UniProt:F6H4J6	EMBL:FN595233	GO:GO:0003674
GO:GO:0003824	GO:GO:0004514	GO:GO:0004516	GO:GO:0006139	GO:GO:0008150	GO:GO:0008152
GO:GO:0009058	GO:GO:0009435	GO:GO:0009987	GO:GO:0016740	GO:GO:0019358	InterPro:IPR013785
EntrezGene:LOC100249147	wikigene:LOC100249147	InterPro:Nic_PRibTrfase-Fam	InterPro:Nic_PRibTrfase_pncB	InterPro:Nicotinate_pribotase_like_C	PIRSF:PIRSF000484
PANTHER:PTHR11098	PANTHER:PTHR11098:SF17	SUPFAM:SSF51690	SUPFAM:SSF54675	TIGRFAMs:TIGR01513	UniParc:UPI0001983B04
ArrayExpress:VIT_07s0031g00460	EnsemblPlantsGene:VIT_07s0031g00460	EnsemblPlants:VIT_07s0031g00460.t01	unigene:Vvi.12071	RefSeq:XP_002282786	RefSeq:XP_002282786.1

Description

No Description!

Coordinates

chr7:+:16671497..16682051

Molecular Weight (calculated)

62660.2 Da

IEP (calculated)

6.425

GRAVY (calculated)

-0.113

Length

561 amino acids

Sequence
(BLAST)

001: MEAKAANGPN TERSYGVIDG PTNPMVTPLL TDLYQFTMCY AYWKAGKHNE RAVFDLFFRK NPFGGEYTIF AGLEECIKFI ANFKFTEEEI SFIRATLPPT
101: CEDGFYDYLR GVDCSDVEVY AISEGSVVFP KVPLMRVEGP IAVAQLLETP FVNLINYASL VATNAARHRL VAGKSKMLLE FGLRRAQGPD GGIGASKYCY
201: IGGFDATSNV AAGRLFGIPL RGTHSHAFVS SFMSPDEIID KSLRSCDGSR TCEDFVSLVQ AWLNKIQWSR SFRGVFGETN QSELAAFTSY ALAFPNNFLA
301: LVDTYDVMKS GIPNFCAVAL ALIDLGYKAV GIRLDSGDLA YLSCEARKFF CTIENEFGVS DFGKMSITAS NDLNEETLDA LNKQGHEVDA FGIGTYLVTC
401: YAQAALGCVF KLVEINNQPR IKLSEDVSKV SIPCKKRCYR LFGREGYPLV DIMTGENELP PKLAERILCR HPFSESKRAY VVPQHVEELL KCYWSGSSGK
501: AREELPPLKN IKERCMKQLE QMRPDHMRRL NPTPYKVSVS AKLYDFIHFL WLNEAPVGEL Q

Best Arabidopsis Sequence Match ( AT2G23420.1 )
(BLAST)

001: MEPKENGSEL GQKIIDGPTN PMVTPLLNDL YQFTMAYAYW KAGKHNERSV FDLYFRKNPF GGEYTVFAGL EECVKFLANF KLTDEEIDFV QECLPGSEEA
101: FCDYLRGLDC SDVEVYAIPE GSVVFPKVPL MRVEGPVGVV QLLETPFLNL VNFASLVATN AARHRFVAGK SKSLLEFGAR RAQGPDGAIS ASKYCYLGGF
201: DATSNVAAGK LFGIPLRGTH SHAYVSSFMS TDEIVDKVLR SADGKTTCED FVSHVQTWLK KIQYSPSLSG IFSETNQSEL AAFTSYALAF PKTFLALVDT
301: YDVMKSGIPN FCAVALALND FGYKALGIRL DSGDLAYLSR EARNFFCTVE RELKVPGFGK MVVTASNDLN EETIDALNKQ GHEVDAFGIG TYLVTCYSQA
401: ALGCVFKLVE INNQPRIKLS EDVTKVSIPC KKRSYRLYGK EGYPLVDIMT GENEPPPKVG ERLLCRHPFN ESKRAYVVPQ RVEELLKCYW RGSADEAREV
501: LPPLKEIRDR CIKQLENMRP DHMRRLNPTP YKVSVSAKLY DFIHFLWLNE APVGELQ

Arabidopsis Description

NAPRT2Nicotinate phosphoribosyltransferase 2 [Source:UniProtKB/Swiss-Prot;Acc:Q84WV8]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.