Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
- cytosol 3
- plastid 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH04597 | Soybean | cytosol | 68.73 | 83.96 |
| GSMUA_Achr2P08220_001 | Banana | cytosol | 84.56 | 81.72 |
| VIT_07s0031g00460.t01 | Wine grape | cytosol | 85.14 | 78.61 |
| CDY63965 | Canola | cytosol | 78.38 | 78.08 |
| Zm00001d034777_P005 | Maize | cytosol | 83.59 | 77.74 |
| PGSC0003DMT400010254 | Potato | cytosol | 82.82 | 76.88 |
| Os03t0837300-02 | Rice | plasma membrane | 82.82 | 76.61 |
| Solyc02g093290.2.1 | Tomato | cytosol, extracellular, nucleus | 82.24 | 76.34 |
| KRH57934 | Soybean | cytosol, nucleus | 82.05 | 76.3 |
| OQU90665 | Sorghum | peroxisome | 83.2 | 76.15 |
| TraesCS4A01G354500.1 | Wheat | peroxisome | 83.59 | 75.04 |
| TraesCS5B01G517900.3 | Wheat | peroxisome | 83.59 | 75.04 |
| TraesCS5D01G517600.1 | Wheat | peroxisome | 83.4 | 74.87 |
| CDY46076 | Canola | cytosol | 80.31 | 74.82 |
| Bra039198.1-P | Field mustard | cytosol | 80.31 | 74.82 |
| CDY66512 | Canola | cytosol | 79.54 | 74.1 |
| AT2G23420.1 | Thale cress | cytosol | 79.54 | 73.97 |
| Bra017808.1-P | Field mustard | cytosol | 75.1 | 73.95 |
| AT4G36940.1 | Thale cress | cytosol | 79.54 | 73.7 |
| CDY29537 | Canola | cytosol | 79.73 | 73.49 |
| Solyc03g044430.2.1 | Tomato | cytosol | 78.76 | 72.08 |
| KRH77015 | Soybean | cytosol | 77.03 | 71.51 |
| KRH63322 | Soybean | extracellular | 11.0 | 68.67 |
| KRH28456 | Soybean | extracellular | 20.66 | 56.61 |
Protein Annotations
| KEGG:00760+6.3.4.21 | Gene3D:3.20.140.10 | Gene3D:3.20.20.70 | MapMan:7.9.2.2 | InterPro:Aldolase_TIM | GO:GO:0003674 |
| GO:GO:0003824 | GO:GO:0004514 | GO:GO:0004516 | GO:GO:0006139 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009058 | GO:GO:0009435 | GO:GO:0009987 | GO:GO:0016740 | GO:GO:0019358 | EnsemblPlantsGene:GSMUA_Achr11G18830_001 |
| EnsemblPlants:GSMUA_Achr11P18830_001 | EnsemblPlants:GSMUA_Achr11T18830_001 | InterPro:IPR013785 | UniProt:M0RTG3 | InterPro:Nic_PRibTrfase-Fam | InterPro:Nic_PRibTrfase_pncB |
| InterPro:Nicotinate_pribotase_like_C | PIRSF:PIRSF000484 | PANTHER:PTHR11098 | PANTHER:PTHR11098:SF17 | SUPFAM:SSF51690 | SUPFAM:SSF54675 |
| TIGRFAMs:TIGR01513 | UniParc:UPI0002968B90 | : | : | : | : |
Description
Nicotinate phosphoribosyltransferase [Source:GMGC_GENE;Acc:GSMUA_Achr11G18830_001]
Coordinates
chr11:-:20125100..20140736
Molecular Weight (calculated)
57914.5 Da
IEP (calculated)
5.931
GRAVY (calculated)
-0.081
Length
518 amino acids
Sequence
(BLAST)
(BLAST)
001: MVTPLLTDLY QFDLYFRKNP FGGEYTVFGG LEECIRFIAN FKFEVDDISF LRSVMPTCED GFFEYLKAID CKDVEVYAIP EGSVVFPKIP LMRIEGPVAV
101: VQLLETPFIN LVNYASLVTT NAARHRLVSG KSKTLLEFGL RRAQGPDGGI SASRCCYMGG FDATSNVAAG RLFGIPLRGT HSHAFVSSYM GPDEITDKAL
201: RRRDGSSTCQ DFVSLVQTWL SKIQWANSFV GTFGETNQSE LAAFTSYALA FPNSFLALVD TYDVMKSGVP NFCAVALALS DLGYKAIGIR LDSGDLAYLS
301: TEARKFFCAI EEEFGVLDFG KMSITASNDL NEETIDALNK QGHEIDAFGI GTYLVTCYAQ AALGCVFKLV EINNQPRIKL SEDVTKVSIP CKNRCYRLYG
401: RESYPLVDIM TGDNELPPKV GERILCRHPF SESKRAYVVP QHVEELLKCY WPGNSDKTIA GLPSLKKPRE RCLQQLEQMR PDHMRRLNPT PYKVSVSAKL
501: YDYIHFLWLN EAPVGELQ
101: VQLLETPFIN LVNYASLVTT NAARHRLVSG KSKTLLEFGL RRAQGPDGGI SASRCCYMGG FDATSNVAAG RLFGIPLRGT HSHAFVSSYM GPDEITDKAL
201: RRRDGSSTCQ DFVSLVQTWL SKIQWANSFV GTFGETNQSE LAAFTSYALA FPNSFLALVD TYDVMKSGVP NFCAVALALS DLGYKAIGIR LDSGDLAYLS
301: TEARKFFCAI EEEFGVLDFG KMSITASNDL NEETIDALNK QGHEIDAFGI GTYLVTCYAQ AALGCVFKLV EINNQPRIKL SEDVTKVSIP CKNRCYRLYG
401: RESYPLVDIM TGDNELPPKV GERILCRHPF SESKRAYVVP QHVEELLKCY WPGNSDKTIA GLPSLKKPRE RCLQQLEQMR PDHMRRLNPT PYKVSVSAKL
501: YDYIHFLWLN EAPVGELQ
001: MEPKENGSEL GQKIIDGPTN PMVTPLLNDL YQFTMAYAYW KAGKHNERSV FDLYFRKNPF GGEYTVFAGL EECVKFLANF KLTDEEIDFV QECLPGSEEA
101: FCDYLRGLDC SDVEVYAIPE GSVVFPKVPL MRVEGPVGVV QLLETPFLNL VNFASLVATN AARHRFVAGK SKSLLEFGAR RAQGPDGAIS ASKYCYLGGF
201: DATSNVAAGK LFGIPLRGTH SHAYVSSFMS TDEIVDKVLR SADGKTTCED FVSHVQTWLK KIQYSPSLSG IFSETNQSEL AAFTSYALAF PKTFLALVDT
301: YDVMKSGIPN FCAVALALND FGYKALGIRL DSGDLAYLSR EARNFFCTVE RELKVPGFGK MVVTASNDLN EETIDALNKQ GHEVDAFGIG TYLVTCYSQA
401: ALGCVFKLVE INNQPRIKLS EDVTKVSIPC KKRSYRLYGK EGYPLVDIMT GENEPPPKVG ERLLCRHPFN ESKRAYVVPQ RVEELLKCYW RGSADEAREV
501: LPPLKEIRDR CIKQLENMRP DHMRRLNPTP YKVSVSAKLY DFIHFLWLNE APVGELQ
101: FCDYLRGLDC SDVEVYAIPE GSVVFPKVPL MRVEGPVGVV QLLETPFLNL VNFASLVATN AARHRFVAGK SKSLLEFGAR RAQGPDGAIS ASKYCYLGGF
201: DATSNVAAGK LFGIPLRGTH SHAYVSSFMS TDEIVDKVLR SADGKTTCED FVSHVQTWLK KIQYSPSLSG IFSETNQSEL AAFTSYALAF PKTFLALVDT
301: YDVMKSGIPN FCAVALALND FGYKALGIRL DSGDLAYLSR EARNFFCTVE RELKVPGFGK MVVTASNDLN EETIDALNKQ GHEVDAFGIG TYLVTCYSQA
401: ALGCVFKLVE INNQPRIKLS EDVTKVSIPC KKRSYRLYGK EGYPLVDIMT GENEPPPKVG ERLLCRHPFN ESKRAYVVPQ RVEELLKCYW RGSADEAREV
501: LPPLKEIRDR CIKQLENMRP DHMRRLNPTP YKVSVSAKLY DFIHFLWLNE APVGELQ
Arabidopsis Description
NAPRT2Nicotinate phosphoribosyltransferase 2 [Source:UniProtKB/Swiss-Prot;Acc:Q84WV8]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.