Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- extracellular 1
- golgi 1
- plasma membrane 1
- endoplasmic reticulum 1
- vacuole 1
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY46076 | Canola | cytosol | 97.88 | 91.55 |
| AT2G23420.1 | Thale cress | cytosol | 93.85 | 87.61 |
| KRH04597 | Soybean | cytosol | 68.08 | 83.49 |
| CDY66512 | Canola | cytosol | 88.65 | 82.91 |
| CDY29537 | Canola | cytosol | 88.46 | 81.85 |
| GSMUA_Achr11P... | Banana | cytosol | 78.08 | 78.38 |
| GSMUA_Achr2P08220_001 | Banana | cytosol | 80.19 | 77.8 |
| Zm00001d003674_P001 | Maize | extracellular | 40.38 | 77.78 |
| VIT_07s0031g00460.t01 | Wine grape | cytosol | 82.12 | 76.11 |
| KRH57934 | Soybean | cytosol, nucleus | 81.35 | 75.94 |
| PGSC0003DMT400010254 | Potato | cytosol | 80.58 | 75.09 |
| Solyc02g093290.2.1 | Tomato | cytosol, extracellular, nucleus | 80.38 | 74.91 |
| Zm00001d034777_P005 | Maize | cytosol | 79.62 | 74.33 |
| Solyc03g044430.2.1 | Tomato | cytosol | 79.04 | 72.61 |
| Os03t0837300-02 | Rice | plasma membrane | 78.08 | 72.5 |
| Os04t0429800-01 | Rice | plasma membrane, plastid | 77.5 | 71.58 |
| OQU90665 | Sorghum | peroxisome | 77.69 | 71.38 |
| KXG26318 | Sorghum | cytosol, plastid | 78.08 | 71.23 |
| KRH63322 | Soybean | extracellular | 11.35 | 71.08 |
| TraesCS2D01G301100.1 | Wheat | golgi | 77.12 | 70.85 |
| TraesCS2B01G318300.2 | Wheat | cytosol, peroxisome, plastid | 77.12 | 70.85 |
| TraesCS2A01G302400.1 | Wheat | cytosol, peroxisome, plastid | 77.12 | 70.85 |
| KRH77015 | Soybean | cytosol | 75.96 | 70.79 |
| TraesCS4A01G354500.1 | Wheat | peroxisome | 77.5 | 69.84 |
| TraesCS5B01G517900.3 | Wheat | peroxisome | 77.31 | 69.67 |
| TraesCS5D01G517600.1 | Wheat | peroxisome | 77.12 | 69.5 |
| Zm00001d025412_P001 | Maize | plastid | 77.69 | 62.73 |
| KRH28456 | Soybean | extracellular | 21.15 | 58.2 |
| Zm00001d003675_P001 | Maize | plastid | 24.23 | 56.5 |
| HORVU2Hr1G074990.1 | Barley | plastid | 5.0 | 24.76 |
Protein Annotations
| KEGG:00760+6.3.4.21 | Gene3D:3.20.140.10 | Gene3D:3.20.20.70 | MapMan:7.9.2.2 | GO:A0A078JFV1 | UniProt:A0A078JFV1 |
| InterPro:Aldolase_TIM | EnsemblPlants:CDY63965 | ProteinID:CDY63965 | ProteinID:CDY63965.1 | GO:GO:0003674 | GO:GO:0003824 |
| GO:GO:0004514 | GO:GO:0004516 | GO:GO:0006139 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 |
| GO:GO:0009435 | GO:GO:0009987 | GO:GO:0016740 | GO:GO:0019358 | EnsemblPlantsGene:GSBRNA2T00040751001 | InterPro:IPR013785 |
| InterPro:Nic_PRibTrfase-Fam | InterPro:Nic_PRibTrfase_pncB | InterPro:Nicotinate_pribotase_like_C | PIRSF:PIRSF000484 | PANTHER:PTHR11098 | PANTHER:PTHR11098:SF17 |
| MetaCyc:PWY-5381 | SUPFAM:SSF51690 | SUPFAM:SSF54675 | TIGRFAMs:TIGR01513 | UniPathway:UPA00253 | UniParc:UPI0004EE976A |
Description
BnaCnng42860DBnaCnng42860D protein (Fragment) [Source:UniProtKB/TrEMBL;Acc:A0A078JFV1]
Coordinates
chrLK034378:+:1..3146
Molecular Weight (calculated)
57907.2 Da
IEP (calculated)
5.406
GRAVY (calculated)
-0.108
Length
520 amino acids
Sequence
(BLAST)
(BLAST)
001: NDPSSDLYVS FYSFDLYFRK NPFGGEYTVF AGLEECVKFL ANFKLTHQEI DYVRDSLPGS EEAFCDYLRG LDCSDVEVYA IPEGTVVFPK VPLMRVEGPV
101: GVVQLLETPF LNLVNFASLV ATNAARHRFV AGKSKSLLEF GARRAQGPDG AISASKYCYL GGFDATSNVA AGKLFGIPLR GTHSHAFVSS FMSTDEIVDK
201: VLQSADGETT CDDFISLVQT WLTKIQYSPS LSGFFSETNQ SELAAFISYA LAFPKAFLAL VDTYDVMKSG IPNFCAVALA LNDLGYKALG IRLDSGDLAY
301: LSTEARNFFC AVERELKVPG FGKMIVTASN DLNEETIDAL NKQGHEVDAF GIGTYLVTCY AQAALGCVFK LVEINNQPRI KLSEDVTKVS IPCKKRSYRL
401: YGKEGYPLVD IMTGENEPPP KVGERLLCRH PFNESKRAYV VPQRVEELLK CYWRGSAGEA REELPPLKEI RDRCIKQLEN MRPDHMRRLN PTPYKVSVSA
501: KLYDFIHFLW LNEAPVGELQ
101: GVVQLLETPF LNLVNFASLV ATNAARHRFV AGKSKSLLEF GARRAQGPDG AISASKYCYL GGFDATSNVA AGKLFGIPLR GTHSHAFVSS FMSTDEIVDK
201: VLQSADGETT CDDFISLVQT WLTKIQYSPS LSGFFSETNQ SELAAFISYA LAFPKAFLAL VDTYDVMKSG IPNFCAVALA LNDLGYKALG IRLDSGDLAY
301: LSTEARNFFC AVERELKVPG FGKMIVTASN DLNEETIDAL NKQGHEVDAF GIGTYLVTCY AQAALGCVFK LVEINNQPRI KLSEDVTKVS IPCKKRSYRL
401: YGKEGYPLVD IMTGENEPPP KVGERLLCRH PFNESKRAYV VPQRVEELLK CYWRGSAGEA REELPPLKEI RDRCIKQLEN MRPDHMRRLN PTPYKVSVSA
501: KLYDFIHFLW LNEAPVGELQ
001: MEPKENGSEL GQKIIDGPTN PMVTPLLNDL YQFTMAYAYW KAGKHNERSV FDLYFRKNPF GGEYTVFAGL EECVKFLANF KLTDEEIDFV QECLPGSEEA
101: FCDYLRGLDC SDVEVYAIPE GSVVFPKVPL MRVEGPVGVV QLLETPFLNL VNFASLVATN AARHRFVAGK SKSLLEFGAR RAQGPDGAIS ASKYCYLGGF
201: DATSNVAAGK LFGIPLRGTH SHAYVSSFMS TDEIVDKVLR SADGKTTCED FVSHVQTWLK KIQYSPSLSG IFSETNQSEL AAFTSYALAF PKTFLALVDT
301: YDVMKSGIPN FCAVALALND FGYKALGIRL DSGDLAYLSR EARNFFCTVE RELKVPGFGK MVVTASNDLN EETIDALNKQ GHEVDAFGIG TYLVTCYSQA
401: ALGCVFKLVE INNQPRIKLS EDVTKVSIPC KKRSYRLYGK EGYPLVDIMT GENEPPPKVG ERLLCRHPFN ESKRAYVVPQ RVEELLKCYW RGSADEAREV
501: LPPLKEIRDR CIKQLENMRP DHMRRLNPTP YKVSVSAKLY DFIHFLWLNE APVGELQ
101: FCDYLRGLDC SDVEVYAIPE GSVVFPKVPL MRVEGPVGVV QLLETPFLNL VNFASLVATN AARHRFVAGK SKSLLEFGAR RAQGPDGAIS ASKYCYLGGF
201: DATSNVAAGK LFGIPLRGTH SHAYVSSFMS TDEIVDKVLR SADGKTTCED FVSHVQTWLK KIQYSPSLSG IFSETNQSEL AAFTSYALAF PKTFLALVDT
301: YDVMKSGIPN FCAVALALND FGYKALGIRL DSGDLAYLSR EARNFFCTVE RELKVPGFGK MVVTASNDLN EETIDALNKQ GHEVDAFGIG TYLVTCYSQA
401: ALGCVFKLVE INNQPRIKLS EDVTKVSIPC KKRSYRLYGK EGYPLVDIMT GENEPPPKVG ERLLCRHPFN ESKRAYVVPQ RVEELLKCYW RGSADEAREV
501: LPPLKEIRDR CIKQLENMRP DHMRRLNPTP YKVSVSAKLY DFIHFLWLNE APVGELQ
Arabidopsis Description
NAPRT2Nicotinate phosphoribosyltransferase 2 [Source:UniProtKB/Swiss-Prot;Acc:Q84WV8]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.