Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT1G12310.1 | CDX86928 | AT5G62070.1 | 21798944 |
| AT1G12310.1 | CDY00251 | AT5G62070.1 | 21798944 |
| AT1G12310.1 | CDY00253 | AT5G62070.1 | 21798944 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY21044 | Canola | cytosol | 99.32 | 99.32 |
| CDY30070 | Canola | cytosol | 95.95 | 95.95 |
| CDX98074 | Canola | cytosol | 95.95 | 95.95 |
| Bra019756.1-P | Field mustard | cytosol | 94.59 | 94.59 |
| AT1G12310.1 | Thale cress | cytosol | 94.59 | 94.59 |
| CDY26556 | Canola | cytosol | 93.92 | 93.92 |
| CDY15991 | Canola | cytosol | 93.24 | 93.24 |
| AT1G62820.1 | Thale cress | cytosol | 90.54 | 90.54 |
| PGSC0003DMT400070433 | Potato | cytosol | 86.49 | 87.07 |
| VIT_02s0241g00140.t01 | Wine grape | cytosol | 86.49 | 87.07 |
| KRH77406 | Soybean | cytosol, endoplasmic reticulum, mitochondrion, nucleus | 85.81 | 86.39 |
| KRH28027 | Soybean | cytosol, endoplasmic reticulum, nucleus | 85.81 | 86.39 |
| Solyc03g083520.2.1 | Tomato | cytosol, nucleus | 85.14 | 84.0 |
| Solyc11g072270.1.1 | Tomato | cytosol | 86.49 | 82.05 |
| Zm00001d035095_P001 | Maize | cytosol, extracellular, mitochondrion | 77.03 | 77.03 |
| OQU79799 | Sorghum | cytosol | 76.35 | 76.35 |
| TraesCS7A01G316100.1 | Wheat | cytosol, unclear | 75.68 | 75.68 |
| Os08t0117400-01 | Rice | plasma membrane | 75.0 | 75.0 |
| GSMUA_Achr3P26750_001 | Banana | cytosol, plasma membrane | 75.0 | 75.0 |
| TraesCS7B01G217200.1 | Wheat | cytosol, plastid | 75.0 | 75.0 |
| Zm00001d049665_P001 | Maize | cytosol, extracellular, mitochondrion, plasma membrane | 75.0 | 75.0 |
| TraesCS7D01G313100.1 | Wheat | cytosol | 74.32 | 74.32 |
| KRH04023 | Soybean | cytosol | 72.97 | 73.47 |
| HORVU7Hr1G075240.1 | Barley | cytosol, plastid | 75.0 | 56.92 |
| CDY65072 | Canola | cytosol | 49.32 | 48.99 |
| CDY55678 | Canola | cytosol | 48.65 | 48.32 |
| CDX92401 | Canola | cytosol | 43.24 | 47.76 |
| CDX96148 | Canola | cytosol | 47.97 | 47.65 |
| CDY04474 | Canola | cytosol | 47.97 | 47.65 |
| CDY56411 | Canola | cytosol | 47.97 | 47.65 |
| CDX99690 | Canola | cytosol | 47.3 | 46.98 |
| CDY12321 | Canola | cytosol | 45.95 | 46.9 |
| CDY27651 | Canola | cytosol | 47.3 | 46.67 |
| CDY48191 | Canola | cytosol | 49.32 | 40.78 |
| CDX77060 | Canola | cytosol | 49.32 | 40.56 |
| CDX92965 | Canola | cytosol | 39.19 | 37.66 |
| CDY10686 | Canola | cytosol | 38.51 | 36.77 |
| CDX94883 | Canola | cytosol | 27.03 | 36.04 |
| CDY34215 | Canola | cytosol | 37.84 | 35.9 |
| CDY06478 | Canola | cytosol | 36.49 | 35.76 |
| CDY57144 | Canola | cytosol | 33.78 | 34.25 |
| CDX75970 | Canola | cytosol | 26.35 | 34.21 |
| CDY10325 | Canola | cytosol | 25.68 | 33.63 |
| CDY30947 | Canola | cytosol | 47.3 | 33.49 |
| CDY21220 | Canola | cytosol | 46.62 | 31.22 |
| CDY40824 | Canola | cytosol | 37.84 | 31.11 |
| CDY58544 | Canola | cytosol | 31.76 | 27.81 |
| CDY26151 | Canola | cytosol | 29.05 | 27.39 |
| CDX81878 | Canola | cytosol | 28.38 | 26.92 |
| CDY19221 | Canola | cytosol | 28.38 | 26.75 |
| CDY21702 | Canola | cytosol | 27.7 | 26.28 |
| CDX75623 | Canola | extracellular | 31.76 | 26.11 |
| CDY61824 | Canola | cytosol | 29.05 | 25.9 |
| CDY54677 | Canola | cytosol | 29.05 | 25.9 |
| CDY04172 | Canola | cytosol | 25.68 | 23.6 |
| CDY59874 | Canola | cytosol | 25.68 | 23.6 |
| CDY51605 | Canola | cytosol | 25.68 | 23.46 |
| CDY48076 | Canola | cytosol | 25.68 | 23.46 |
| CDX83123 | Canola | golgi | 29.05 | 22.51 |
| CDY62753 | Canola | cytosol | 29.73 | 22.0 |
Protein Annotations
| Gene3D:1.10.238.10 | MapMan:35.1 | GO:A0A078H1E3 | UniProt:A0A078H1E3 | EnsemblPlants:CDY31259 | ProteinID:CDY31259 |
| ProteinID:CDY31259.1 | InterPro:EF-hand-dom_pair | InterPro:EF_Hand_1_Ca_BS | InterPro:EF_hand_dom | GO:GO:0003674 | GO:GO:0005488 |
| GO:GO:0005509 | EnsemblPlantsGene:GSBRNA2T00047412001 | InterPro:IPR002048 | PFAM:PF13405 | PFAM:PF13499 | ScanProsite:PS00018 |
| PFscan:PS50222 | PANTHER:PTHR23050 | PANTHER:PTHR23050:SF214 | SMART:SM00054 | SUPFAM:SSF47473 | UniParc:UPI0004EF3350 |
Description
BnaC08g15540DBnaC08g15540D protein [Source:UniProtKB/TrEMBL;Acc:A0A078H1E3]
Coordinates
chrLK032269:-:292741..293522
Molecular Weight (calculated)
16396.4 Da
IEP (calculated)
4.477
GRAVY (calculated)
-0.347
Length
148 amino acids
Sequence
(BLAST)
(BLAST)
001: MGKDGLSDDQ VSSMKEAFTL FDTDGDGKIA PSELGILMRS LGGNPTQAQL KSITASESLT SPFDFERFLD LMAKHLKTEP FDRQLRDAFK VLDKEGSGFV
101: AVADLRHILT SIGEKLEGSE FDEWIKEVDV GSDGKIRYED FIARMVAK
101: AVADLRHILT SIGEKLEGSE FDEWIKEVDV GSDGKIRYED FIARMVAK
001: MSKDGLSNDQ VSSMKEAFML FDTDGDGKIA PSELGILMRS LGGNPTESQL KSIITTENLS SPFDFNRFLD LMAKHLKTEP FDRQLRDAFK VLDKEGTGFV
101: AVADLRHILT SIGEKLQPSE FDEWIKEVDV GSDGKIRYED FIARMVAK
101: AVADLRHILT SIGEKLQPSE FDEWIKEVDV GSDGKIRYED FIARMVAK
Arabidopsis Description
CML14Probable calcium-binding protein CML14 [Source:UniProtKB/Swiss-Prot;Acc:Q8VZ50]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.