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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • nucleus 1
  • cytosol 2
  • mitochondrion 1
  • plastid 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, nucleus, plastid
BaCelLo:nucleus
MultiLoc:cytosol
PProwler:mitochondrion
WoLF PSORT:plastid
YLoc:cytosol
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra019453.1-P Field mustard cytosol 66.52 98.66
CDY04474 Canola cytosol 66.52 98.66
CDY56411 Canola cytosol 66.52 98.66
PGSC0003DMT400018569 Potato cytosol 66.06 97.99
PGSC0003DMT400070437 Potato cytosol 66.06 97.99
Solyc10g077010.1.1 Tomato cytosol 66.06 97.99
Solyc11g072240.1.1 Tomato cytosol 66.06 97.99
Solyc12g099990.1.1 Tomato nucleus 66.06 97.99
CDY30947 Canola cytosol 92.31 97.61
PGSC0003DMT400046278 Potato cytosol 33.94 97.4
CDY65072 Canola cytosol 65.61 97.32
PGSC0003DMT400058435 Potato cytosol 65.61 97.32
Solyc01g008950.2.1 Tomato nucleus 65.61 97.32
Solyc10g081170.1.1 Tomato extracellular 65.61 97.32
VIT_08s0040g00470.t01 Wine grape cytosol 65.61 97.32
CDX92401 Canola cytosol 58.82 97.01
GSMUA_Achr10P... Banana cytosol 65.16 96.64
GSMUA_Achr6P15990_001 Banana cytosol 65.16 96.64
GSMUA_Achr9P17280_001 Banana cytosol 65.16 96.64
Os01t0267900-01 Rice cytosol 65.16 96.64
Os01t0279300-01 Rice cytosol, plasma membrane, plastid 65.16 96.64
Os03t0319300-01 Rice cytosol, extracellular, nucleus 65.16 96.64
Os07t0687200-02 Rice cytosol 65.16 96.64
GSMUA_Achr5P27590_001 Banana cytosol 50.68 96.55
CDY55678 Canola cytosol 64.71 95.97
GSMUA_Achr10P... Banana cytosol, plasma membrane 64.71 95.97
GSMUA_Achr3P09330_001 Banana cytosol 64.71 95.97
GSMUA_Achr5P07820_001 Banana cytosol 64.71 95.97
GSMUA_Achr6P23670_001 Banana cytosol 64.71 95.97
KRG94975 Soybean nucleus 64.71 95.97
CDY12321 Canola cytosol 62.9 95.86
PGSC0003DMT400054299 Potato cytosol 48.87 95.58
VIT_06s0009g01910.t01 Wine grape cytosol 66.06 95.42
CDX96148 Canola cytosol 64.25 95.3
GSMUA_Achr2P01120_001 Banana cytosol 64.25 95.3
GSMUA_Achr3P25040_001 Banana cytosol 64.25 95.3
Os05t0491100-01 Rice cytosol, extracellular 64.25 95.3
CDY27651 Canola cytosol 64.25 94.67
Zm00001d008278_P001 Maize cytosol 54.3 94.49
CDX99690 Canola cytosol 63.35 93.96
GSMUA_Achr11P... Banana cytosol 42.99 93.14
TraesCS1A01G308800.1 Wheat cytosol 55.2 93.13
TraesCS3A01G184500.1 Wheat cytosol 65.61 88.41
KRH18664 Soybean cytosol 55.2 87.14
TraesCS3D01G188600.1 Wheat cytosol 65.16 86.23
PGSC0003DMT400014123 Potato mitochondrion 46.61 84.43
CDY48191 Canola cytosol 68.33 84.36
Zm00001d038545_P001 Maize cytosol, mitochondrion 56.56 83.89
CDX77060 Canola cytosol 68.33 83.89
TraesCS3B01G219900.1 Wheat cytosol 65.61 83.33
Zm00001d047597_P001 Maize cytosol 55.2 82.99
TraesCS2B01G113800.2 Wheat cytosol 65.16 82.29
AT3G43810.2 Thale cress cytosol 79.19 81.78
CDX75970 Canola cytosol 41.18 79.82
TraesCS3A01G335000.1 Wheat cytosol 65.61 79.67
TraesCS3D01G328300.1 Wheat cytosol 65.61 79.67
TraesCS3A01G191900.1 Wheat cytosol 56.11 77.99
TraesCS3D01G194500.2 Wheat cytosol 56.11 77.99
HORVU3Hr1G079210.4 Barley cytosol 64.71 77.72
TraesCS3B01G365900.1 Wheat cytosol 63.35 76.5
Zm00001d038543_P004 Maize plastid 56.56 73.96
KRG89812 Soybean cytosol, mitochondrion 54.75 73.33
HORVU3Hr1G038010.1 Barley cytosol, plastid 65.16 72.36
PGSC0003DMT400097662 Potato cytosol, mitochondrion 56.56 72.25
CDX92965 Canola cytosol 49.77 71.43
EES01631 Sorghum cytosol 59.28 71.2
CDY34215 Canola cytosol 50.23 71.15
CDY10686 Canola cytosol 49.77 70.97
Zm00001d043144_P001 Maize plasma membrane 58.37 70.49
CDX94883 Canola cytosol 35.29 70.27
Os01t0810300-01 Rice plasma membrane 57.92 68.45
HORVU2Hr1G016740.4 Barley cytosol 66.52 68.37
CDY10325 Canola cytosol 34.39 67.26
CDY06478 Canola cytosol 45.25 66.23
GSMUA_Achr10P... Banana cytosol 55.2 64.55
Zm00001d028948_P001 Maize cytosol 57.47 64.47
CDY57144 Canola cytosol 42.53 64.38
GSMUA_Achr10P... Banana cytosol 54.3 63.83
EES09201 Sorghum cytosol 50.68 62.22
CDY40824 Canola cytosol 50.23 61.67
HORVU5Hr1G044710.4 Barley cytosol 50.23 61.67
TraesCS5B01G137100.1 Wheat cytosol 50.23 61.67
Zm00001d041430_P001 Maize cytosol 47.06 61.54
TraesCS5D01G068100.1 Wheat cytosol 45.25 61.35
TraesCS5A01G139700.1 Wheat cytosol 49.77 61.11
TraesCS5D01G153400.1 Wheat cytosol 49.77 61.11
EES16322 Sorghum cytosol 48.42 60.8
TraesCS5A01G057100.1 Wheat cytosol 45.25 60.61
HORVU5Hr1G014070.2 Barley cytosol 45.25 60.24
Zm00001d052415_P001 Maize cytosol 42.99 60.13
TraesCS5A01G057200.1 Wheat cytosol 44.34 60.12
Zm00001d005003_P002 Maize cytosol 48.87 60.0
Os12t0603800-00 Rice cytosol 44.8 59.64
TraesCS5D01G068000.1 Wheat cytosol 45.25 59.52
TraesCS5B01G059900.1 Wheat cytosol 44.8 58.93
Os05t0491000-01 Rice cytosol 33.48 47.74
CDX98074 Canola cytosol 31.22 46.62
CDY21044 Canola cytosol 31.22 46.62
CDY30070 Canola cytosol 31.22 46.62
CDY31259 Canola cytosol 31.22 46.62
HORVU0Hr1G001280.1 Barley cytosol 31.67 46.36
HORVU5Hr1G014060.1 Barley cytosol, plastid 44.8 46.26
TraesCS1A01G308700.1 Wheat cytosol 31.67 46.05
TraesCS1B01G319300.1 Wheat cytosol 31.22 46.0
TraesCS1D01G308000.1 Wheat cytosol 31.22 46.0
CDY26556 Canola cytosol 30.77 45.95
CDY15991 Canola cytosol 30.32 45.27
TraesCS4B01G131100.1 Wheat cytosol 46.15 44.16
Zm00001d010649_P001 Maize extracellular 28.05 43.66
TraesCS4D01G126100.1 Wheat cytosol 47.06 43.15
HORVU4Hr1G026290.3 Barley cytosol, plastid 41.63 41.63
OQU78227 Sorghum cytosol 33.03 40.78
CDY54677 Canola cytosol 28.96 38.55
CDY61824 Canola cytosol 28.96 38.55
CDY58544 Canola cytosol 29.41 38.46
CDY59874 Canola cytosol 26.24 36.02
CDX75623 Canola extracellular 28.96 35.56
CDY04172 Canola cytosol 25.79 35.4
CDY48076 Canola cytosol 25.79 35.19
CDY51605 Canola cytosol 25.79 35.19
CDY26151 Canola cytosol 24.89 35.03
CDX81878 Canola cytosol 24.43 34.62
CDY21702 Canola cytosol 24.43 34.62
CDX83123 Canola golgi 29.86 34.55
CDY19221 Canola cytosol 24.43 34.39
CDY62753 Canola cytosol 30.32 33.5
GSMUA_Achr8P05790_001 Banana cytosol 30.77 27.76
Protein Annotations
Gene3D:1.10.238.10MapMan:35.1GO:A0A078G410UniProt:A0A078G410EnsemblPlants:CDY21220ProteinID:CDY21220
ProteinID:CDY21220.1InterPro:EF-hand-dom_pairInterPro:EF_Hand_1_Ca_BSInterPro:EF_hand_domGO:GO:0003674GO:GO:0005488
GO:GO:0005509EnsemblPlantsGene:GSBRNA2T00015433001InterPro:IPR002048PFAM:PF13499PFAM:PF13833ScanProsite:PS00018
PFscan:PS50222PANTHER:PTHR23050PANTHER:PTHR23050:SF250SMART:SM00054SUPFAM:SSF47473UniParc:UPI0004EE5470
SEG:seg:::::
Description
BnaC03g54040DBnaC03g54040D protein [Source:UniProtKB/TrEMBL;Acc:A0A078G410]
Coordinates
chrLK032117:-:31095..33731
Molecular Weight (calculated)
25184.1 Da
IEP (calculated)
4.774
GRAVY (calculated)
-0.594
Length
221 amino acids
Sequence
(BLAST)
001: MADQLTDDQI SEFKEAFSLF DKDGDALLLT LLTIAFIRCI TTKELGTVMR SLGQNPTEAE LQDMINEVDA DGNGTIDFPE FLNLMARKMK DTDSEEELKE
101: AFRVFDKDQN GFISAAELRH VMTNLGEKLT DEEVDEMVRE ADVDGDGQIN YDEFVKVMMA NKLRKCATNK KKKTKKKKTK NAKQNEKQMI RQKPADSESH
201: CIPVPSCMLR FCYRPSFSSI L
Best Arabidopsis Sequence Match ( AT3G43810.2 )
(BLAST)
001: MADQLTDDQI SEFKEAFSLF DKDGDGCITT KELGTVMRSL GQNPTEAELQ DMINEVDADG NGTIDFPEFL NLMARKMKDT DSEEELKEAF RVFDKDQNGF
101: ISAAELRHVM TNLGEKLTDE EVDEMIREAD VDGDGQINYE EFVKVMMANH VWECASKLIK KRKKKKKKKK KKKTKNAKRN EKELIQHNPS QPESHRVPSR
201: LNLLCHRSHS CSIL
Arabidopsis Description
CAM7Calmodulin 7 [Source:UniProtKB/TrEMBL;Acc:A0A1I9LPJ2]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.