Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX94883 | Canola | cytosol | 89.38 | 90.99 |
| CDY10686 | Canola | cytosol | 94.69 | 69.03 |
| Bra023786.1-P | Field mustard | cytosol | 92.04 | 66.67 |
| CDY34215 | Canola | cytosol | 92.04 | 66.67 |
| CDX92965 | Canola | cytosol | 89.38 | 65.58 |
| AT3G22930.1 | Thale cress | cytosol | 88.5 | 57.8 |
| CDX92401 | Canola | cytosol | 68.14 | 57.46 |
| CDY40824 | Canola | cytosol | 91.15 | 57.22 |
| VIT_05s0020g04420.t01 | Wine grape | cytosol | 74.34 | 56.38 |
| KRH31638 | Soybean | cytosol | 74.34 | 56.0 |
| KRH69070 | Soybean | cytosol | 73.45 | 55.33 |
| GSMUA_Achr1P27230_001 | Banana | cytosol | 70.8 | 54.05 |
| Solyc06g053930.2.1 | Tomato | cytosol | 70.8 | 53.69 |
| CDX99690 | Canola | cytosol | 70.8 | 53.69 |
| CDY06478 | Canola | cytosol | 71.68 | 53.64 |
| GSMUA_Achr7P01390_001 | Banana | cytosol | 69.91 | 53.38 |
| PGSC0003DMT400042062 | Potato | cytosol | 70.8 | 53.33 |
| GSMUA_Achr6P24410_001 | Banana | cytosol | 69.91 | 53.02 |
| CDX96148 | Canola | cytosol | 69.91 | 53.02 |
| CDY55678 | Canola | cytosol | 69.91 | 53.02 |
| GSMUA_Achr2P12680_001 | Banana | cytosol | 69.03 | 52.7 |
| GSMUA_Achr5P09010_001 | Banana | cytosol | 68.14 | 52.03 |
| GSMUA_Achr1P04700_001 | Banana | cytosol | 68.14 | 52.03 |
| CDY27651 | Canola | cytosol | 69.03 | 52.0 |
| CDY04474 | Canola | cytosol | 68.14 | 51.68 |
| CDY65072 | Canola | cytosol | 68.14 | 51.68 |
| CDY56411 | Canola | cytosol | 68.14 | 51.68 |
| GSMUA_Achr4P22570_001 | Banana | cytosol | 67.26 | 51.35 |
| CDY12321 | Canola | cytosol | 64.6 | 50.34 |
| PGSC0003DMT400034833 | Potato | cytosol | 61.06 | 45.1 |
| Solyc03g005240.1.1 | Tomato | cytosol | 60.18 | 44.44 |
| CDY48191 | Canola | cytosol | 68.14 | 43.02 |
| Os03t0743500-02 | Rice | nucleus | 58.41 | 42.86 |
| CDX77060 | Canola | cytosol | 68.14 | 42.78 |
| KXG37587 | Sorghum | cytosol | 54.87 | 40.26 |
| CDX75970 | Canola | cytosol | 38.94 | 38.6 |
| CDY57144 | Canola | cytosol | 47.79 | 36.99 |
| CDY30947 | Canola | cytosol | 68.14 | 36.84 |
| GSMUA_Achr3P25390_001 | Banana | cytosol | 58.41 | 36.07 |
| CDY21220 | Canola | cytosol | 67.26 | 34.39 |
| GSMUA_Achr1P14070_001 | Banana | cytosol | 64.6 | 32.3 |
| TraesCS5A01G382800.2 | Wheat | plastid | 48.67 | 29.41 |
| Zm00001d033980_P001 | Maize | cytosol | 40.71 | 29.3 |
| CDY21044 | Canola | cytosol | 34.51 | 26.35 |
| CDY30070 | Canola | cytosol | 33.63 | 25.68 |
| CDY31259 | Canola | cytosol | 33.63 | 25.68 |
| CDX98074 | Canola | cytosol | 33.63 | 25.68 |
| CDX83123 | Canola | golgi | 43.36 | 25.65 |
| CDY58544 | Canola | cytosol | 38.05 | 25.44 |
| CDY62753 | Canola | cytosol | 44.25 | 25.0 |
| CDY15991 | Canola | cytosol | 32.74 | 25.0 |
| CDY26556 | Canola | cytosol | 32.74 | 25.0 |
| CDY26151 | Canola | cytosol | 34.51 | 24.84 |
| CDY04172 | Canola | cytosol | 34.51 | 24.22 |
| CDY59874 | Canola | cytosol | 34.51 | 24.22 |
| CDY19221 | Canola | cytosol | 33.63 | 24.2 |
| CDY48076 | Canola | cytosol | 34.51 | 24.07 |
| CDY51605 | Canola | cytosol | 34.51 | 24.07 |
| CDX75623 | Canola | extracellular | 38.05 | 23.89 |
| CDY21702 | Canola | cytosol | 32.74 | 23.72 |
| CDX81878 | Canola | cytosol | 32.74 | 23.72 |
| CDY61824 | Canola | cytosol | 32.74 | 22.29 |
| CDY54677 | Canola | cytosol | 32.74 | 22.29 |
| KXG37588 | Sorghum | mitochondrion, nucleus | 0.88 | 0.73 |
Protein Annotations
| Gene3D:1.10.238.10 | MapMan:35.1 | GO:A0A078F728 | UniProt:A0A078F728 | EnsemblPlants:CDY10325 | ProteinID:CDY10325 |
| ProteinID:CDY10325.1 | ncoils:Coil | InterPro:EF-hand-dom_pair | InterPro:EF_Hand_1_Ca_BS | InterPro:EF_hand_dom | GO:GO:0003674 |
| GO:GO:0005488 | GO:GO:0005509 | EnsemblPlantsGene:GSBRNA2T00032194001 | InterPro:IPR002048 | PFAM:PF13202 | PFAM:PF13499 |
| ScanProsite:PS00018 | PFscan:PS50222 | PANTHER:PTHR23050 | PANTHER:PTHR23050:SF336 | SMART:SM00054 | SUPFAM:SSF47473 |
| UniParc:UPI0004EC0DED | SEG:seg | : | : | : | : |
Description
BnaC05g29540DBnaC05g29540D protein [Source:UniProtKB/TrEMBL;Acc:A0A078F728]
Coordinates
chrLK032002:-:562460..562920
Molecular Weight (calculated)
12796.8 Da
IEP (calculated)
3.776
GRAVY (calculated)
-0.609
Length
113 amino acids
Sequence
(BLAST)
(BLAST)
001: MDETKQQLEL TQEQIMEFKE AFCLFDKDGD GCITADELAT VIRSLDQNPT EQELRDMINE IDSDGNGTIE FSEFLNLMGG KIQETDADEE LKEAFKVFDK
101: DQNGYISASK VSI
101: DQNGYISASK VSI
001: MEEIQQQQQQ QQQQQQQQQQ QQQQQQELTQ EQIMEFKEAF CLFDKDGDGC ITADELATVI RSLDQNPTEQ ELQDMITEID SDGNGTIEFS EFLNLMANQL
101: QETDADEELK EAFKVFDKDQ NGYISASEVS K
101: QETDADEELK EAFKVFDKDQ NGYISASEVS K
Arabidopsis Description
CML11Calmodulin-like protein 11 [Source:UniProtKB/Swiss-Prot;Acc:Q9LIK5]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.