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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • nucleus 1
  • cytosol 3
  • mitochondrion 1
  • plastid 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, nucleus, plastid
BaCelLo:nucleus
MultiLoc:cytosol
Predotar:plastid
PProwler:mitochondrion
WoLF PSORT:cytosol
YLoc:cytosol
PPI

Inferred distinct locusB in Crop

locusBlocations
CDX68763
CDX72118
CDX72310
CDX74175
CDX80000
CDX84824
CDX86205
CDX87823
CDX89558
CDX92626
CDX97806
CDY03470
CDY05601
CDY10749
CDY10996
CDY13441
CDY20325
CDY23304
CDY23988
CDY29658
CDY33884
CDY34269
CDY36432
CDY38936
CDY40667
CDY41890
CDY42022
CDY43913
CDY45583
CDY47130
CDY48658
CDY50747
CDY56774
CDY60852

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT3G56800.1 CDX87823 AT1G51500.1 15299147
AT3G56800.1 CDY43913 AT1G51500.1 15299147
AT3G56800.1 CDX89558 AT2G23320.1 15733871
AT3G56800.1 CDY38936 AT2G23320.1 15733871
AT3G56800.1 CDY20325 AT2G24570.1 15733871
AT3G56800.1 CDY45583 AT2G24570.1 15733871
AT3G56800.1 CDX84824 AT2G30590.1 15733871
AT3G56800.1 CDX97806 AT2G30590.1 15733871
AT3G56800.1 CDY10749 AT2G30590.1 15733871
AT3G56800.1 CDY23988 AT2G30590.1 15733871
AT3G56800.1 CDY29658 AT2G30590.1 15733871
AT3G56800.1 CDY47130 AT2G30590.1 15733871
AT3G56800.1 CDX80000 AT2G46240.1 16003391
AT3G56800.1 CDY42022 AT2G46240.1 16003391
AT3G56800.1 CDX74175 AT3G04670.1 15733871
AT3G56800.1 CDY40667 AT3G04670.1 15733871
AT3G56800.1 CDY41890 AT3G04670.1 15733871
AT3G56800.1 CDY50747 AT3G04670.1 15733871
AT3G56800.1 CDX72118 AT3G56690.1 11346951
AT3G56800.1 CDY56774 AT3G56690.1 11346951
AT3G56800.1 CDX92626 AT4G24240.1 15733871
AT3G56800.1 CDY03470 AT4G24240.1 15733871
AT3G56800.1 CDY10996 AT4G24240.1 15733871
AT3G56800.1 CDY34269 AT4G24240.1 15733871
AT3G56800.1 CDX68763 AT4G31550.1 15733871
AT3G56800.1 CDX72310 AT4G31550.1 15733871
AT3G56800.1 CDY13441 AT4G31550.1 15733871
AT3G56800.1 CDY23304 AT4G31550.1 15733871
AT3G56800.1 CDY36432 AT4G31550.1 15733871
AT3G56800.1 CDY60852 AT4G31550.1 15733871
AT3G56800.1 CDX86205 AT5G28650.1 15733871
AT3G56800.1 CDY05601 AT5G28650.1 15733871
AT3G56800.1 CDY33884 AT5G28650.1 15733871
AT3G56800.1 CDY48658 AT5G28650.1 15733871
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
PGSC0003DMT400046278 Potato cytosol 41.1 77.92
PGSC0003DMT400054299 Potato cytosol 58.22 75.22
Zm00001d008278_P001 Maize cytosol 63.01 72.44
TraesCS1A01G308800.1 Wheat cytosol 63.01 70.23
CDX92401 Canola cytosol 64.38 70.15
GSMUA_Achr5P27590_001 Banana cytosol 53.42 67.24
KRH18664 Soybean cytosol 64.38 67.14
CDX75970 Canola cytosol 52.05 66.67
AT3G56800.1 Thale cress cytosol 67.12 65.77
Bra014671.1-P Field mustard cytosol 67.12 65.77
GSMUA_Achr10P... Banana cytosol, plasma membrane 67.12 65.77
GSMUA_Achr3P09330_001 Banana cytosol 67.12 65.77
GSMUA_Achr5P07820_001 Banana cytosol 67.12 65.77
GSMUA_Achr6P23670_001 Banana cytosol 67.12 65.77
PGSC0003DMT400014123 Potato mitochondrion 54.79 65.57
CDY65072 Canola cytosol 66.44 65.1
GSMUA_Achr2P01120_001 Banana cytosol 66.44 65.1
GSMUA_Achr3P25040_001 Banana cytosol 66.44 65.1
GSMUA_Achr6P15990_001 Banana cytosol 66.44 65.1
GSMUA_Achr9P17280_001 Banana cytosol 66.44 65.1
KRG94975 Soybean nucleus 66.44 65.1
Os01t0267900-01 Rice cytosol 66.44 65.1
Os03t0319300-01 Rice cytosol, extracellular, nucleus 66.44 65.1
Os05t0491100-01 Rice cytosol, extracellular 66.44 65.1
Os07t0687200-02 Rice cytosol 66.44 65.1
Solyc10g081170.1.1 Tomato extracellular 66.44 65.1
VIT_08s0040g00470.t01 Wine grape cytosol 66.44 65.1
GSMUA_Achr10P... Banana cytosol 65.75 64.43
PGSC0003DMT400018569 Potato cytosol 65.75 64.43
PGSC0003DMT400058435 Potato cytosol 65.75 64.43
PGSC0003DMT400070437 Potato cytosol 65.75 64.43
Solyc01g008950.2.1 Tomato nucleus 65.75 64.43
Solyc10g077010.1.1 Tomato cytosol 65.75 64.43
Solyc11g072240.1.1 Tomato cytosol 65.75 64.43
Solyc12g099990.1.1 Tomato nucleus 65.75 64.43
Zm00001d047597_P001 Maize cytosol 64.38 63.95
CDY04474 Canola cytosol 65.07 63.76
CDY55678 Canola cytosol 65.07 63.76
CDY56411 Canola cytosol 65.07 63.76
Os01t0279300-01 Rice cytosol, plasma membrane, plastid 65.07 63.76
GSMUA_Achr11P... Banana cytosol 44.52 63.73
VIT_06s0009g01910.t01 Wine grape cytosol 66.44 63.4
CDX96148 Canola cytosol 64.38 63.09
CDX99690 Canola cytosol 64.38 63.09
Zm00001d038545_P001 Maize cytosol, mitochondrion 64.38 63.09
CDY12321 Canola cytosol 61.64 62.07
CDY27651 Canola cytosol 63.7 62.0
TraesCS3A01G184500.1 Wheat cytosol 65.75 58.54
TraesCS3D01G188600.1 Wheat cytosol 66.44 58.08
TraesCS3A01G191900.1 Wheat cytosol 63.01 57.86
TraesCS3D01G194500.2 Wheat cytosol 63.01 57.86
Zm00001d038543_P004 Maize plastid 66.44 57.4
TraesCS2B01G113800.2 Wheat cytosol 66.44 55.43
PGSC0003DMT400097662 Potato cytosol, mitochondrion 65.07 54.91
TraesCS3B01G219900.1 Wheat cytosol 65.07 54.6
CDY48191 Canola cytosol 66.44 54.19
CDX77060 Canola cytosol 66.44 53.89
TraesCS3A01G335000.1 Wheat cytosol 65.75 52.75
TraesCS3D01G328300.1 Wheat cytosol 65.75 52.75
HORVU3Hr1G079210.4 Barley cytosol 65.75 52.17
KRG89812 Soybean cytosol, mitochondrion 58.9 52.12
TraesCS3B01G365900.1 Wheat cytosol 65.07 51.91
CDX92965 Canola cytosol 53.42 50.65
Zm00001d028948_P001 Maize cytosol 67.12 49.75
CDX94883 Canola cytosol 37.67 49.55
CDY10686 Canola cytosol 52.05 49.03
HORVU3Hr1G038010.1 Barley cytosol, plastid 66.44 48.74
CDY34215 Canola cytosol 52.05 48.72
CDY10325 Canola cytosol 36.99 47.79
CDY06478 Canola cytosol 47.95 46.36
Os01t0810300-01 Rice plasma membrane 58.9 45.99
HORVU2Hr1G016740.4 Barley cytosol 66.44 45.12
EES01631 Sorghum cytosol 56.85 45.11
CDY30947 Canola cytosol 64.38 44.98
GSMUA_Achr10P... Banana cytosol 56.85 43.92
Zm00001d043144_P001 Maize plasma membrane 54.79 43.72
Zm00001d052415_P001 Maize cytosol 46.58 43.04
GSMUA_Achr10P... Banana cytosol 54.79 42.55
CDY21220 Canola cytosol 64.38 42.53
CDY40824 Canola cytosol 52.05 42.22
HORVU5Hr1G044710.4 Barley cytosol 51.37 41.67
TraesCS5A01G139700.1 Wheat cytosol 50.68 41.11
TraesCS5B01G137100.1 Wheat cytosol 50.68 41.11
TraesCS5D01G153400.1 Wheat cytosol 50.68 41.11
TraesCS5D01G068100.1 Wheat cytosol 45.89 41.1
TraesCS5A01G057200.1 Wheat cytosol 45.21 40.49
Os12t0603800-00 Rice cytosol 45.89 40.36
EES09201 Sorghum cytosol 49.32 40.0
TraesCS5A01G057100.1 Wheat cytosol 45.21 40.0
TraesCS5B01G059900.1 Wheat cytosol 45.21 39.29
TraesCS5D01G068000.1 Wheat cytosol 45.21 39.29
HORVU5Hr1G014070.2 Barley cytosol 44.52 39.16
Zm00001d005003_P002 Maize cytosol 47.95 38.89
EES16322 Sorghum cytosol 45.89 38.07
Zm00001d041430_P001 Maize cytosol 43.15 37.28
CDX98074 Canola cytosol 34.25 33.78
CDY21044 Canola cytosol 34.25 33.78
CDY26556 Canola cytosol 34.25 33.78
CDY30070 Canola cytosol 34.25 33.78
CDY31259 Canola cytosol 34.25 33.78
CDY15991 Canola cytosol 33.56 33.11
Os05t0491000-01 Rice cytosol 33.56 31.61
HORVU5Hr1G014060.1 Barley cytosol, plastid 45.21 30.84
CDY54677 Canola cytosol 33.56 29.52
CDY61824 Canola cytosol 33.56 29.52
HORVU4Hr1G026290.3 Barley cytosol, plastid 44.52 29.41
Zm00001d010649_P001 Maize extracellular 28.08 28.87
CDY26151 Canola cytosol 30.82 28.66
TraesCS4B01G131100.1 Wheat cytosol 45.21 28.57
CDY58544 Canola cytosol 32.88 28.4
CDX81878 Canola cytosol 30.14 28.21
CDY21702 Canola cytosol 30.14 28.21
CDY19221 Canola cytosol 30.14 28.03
HORVU0Hr1G001280.1 Barley cytosol 28.77 27.81
TraesCS4D01G126100.1 Wheat cytosol 45.89 27.8
TraesCS1B01G319300.1 Wheat cytosol 28.08 27.33
TraesCS1D01G308000.1 Wheat cytosol 28.08 27.33
TraesCS1A01G308700.1 Wheat cytosol 28.08 26.97
OQU78227 Sorghum cytosol 32.88 26.82
CDX75623 Canola extracellular 32.88 26.67
CDY04172 Canola cytosol 28.77 26.09
CDY59874 Canola cytosol 28.77 26.09
CDY48076 Canola cytosol 28.77 25.93
CDY51605 Canola cytosol 28.77 25.93
CDX83123 Canola golgi 32.88 25.13
CDY62753 Canola cytosol 33.56 24.5
GSMUA_Achr8P05790_001 Banana cytosol 27.4 16.33
Protein Annotations
EnsemblPlants:CDY57144EnsemblPlantsGene:GSBRNA2T00020584001Gene3D:1.10.238.10GO:A0A078IYC0GO:GO:0003674GO:GO:0005488
GO:GO:0005509InterPro:EF-hand-dom_pairInterPro:EF_Hand_1_Ca_BSInterPro:EF_hand_domInterPro:IPR002048PANTHER:PTHR23050
PANTHER:PTHR23050:SF250PFAM:PF00036PFscan:PS50222ProteinID:CDY57144ProteinID:CDY57144.1ScanProsite:PS00018
SMART:SM00054SUPFAM:SSF47473UniParc:UPI0004EE388FUniProt:A0A078IYC0MapMan:35.1:
Description
BnaC04g53510DBnaC04g53510D protein [Source:UniProtKB/TrEMBL;Acc:A0A078IYC0]
Coordinates
chrLK033549:-:31744..32556
Molecular Weight (calculated)
16334.4 Da
IEP (calculated)
3.965
GRAVY (calculated)
-0.264
Length
146 amino acids
Sequence
(BLAST)
001: MPLYPGIHGE VVMSKSPKWL VNSGPGSKQD IFSTRVLVPV CDGLVELLSF IMNPTEAELQ DVINEVDADG NSTIDFPEFL NLMAHKMKDT DSEEELKEAF
101: RVFDKDQNGF ISAAELQEVD EMIKEADVDG DGQINYEEFV KVMMAK
Best Arabidopsis Sequence Match ( AT2G27030.1 )
(BLAST)
001: MADQLTDDQI SEFKEAFSLF DKDGDGCITT KELGTVMRSL GQNPTEAELQ DMINEVDADG NGTIDFPEFL NLMARKMKDT DSEEELKEAF RVFDKDQNGF
101: ISAAELRHVM TNLGEKLTDE EVDEMIKEAD VDGDGQINYE EFVKVMMAK
Arabidopsis Description
CAM5Calmodulin 5 [Source:UniProtKB/TrEMBL;Acc:F4IVN6]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.