Skip to main content
crop-pal logo
Canola
Search for another protein from :
Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • nucleus 2
  • cytosol 4
  • plasma membrane 1
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, mitochondrion, nucleus, plasma membrane
BaCelLo:nucleus
EpiLoc:cytosol
MultiLoc:cytosol
Plant-mPloc:cytosol, plasma membrane
PProwler:mitochondrion
WoLF PSORT:nucleus
YLoc:cytosol
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra012037.1-P Field mustard cytosol 100.0 100.0
CDY04474 Canola cytosol 100.0 100.0
PGSC0003DMT400018569 Potato cytosol 99.33 99.33
PGSC0003DMT400070437 Potato cytosol 99.33 99.33
Solyc10g077010.1.1 Tomato cytosol 99.33 99.33
Solyc11g072240.1.1 Tomato cytosol 99.33 99.33
Solyc12g099990.1.1 Tomato nucleus 99.33 99.33
PGSC0003DMT400046278 Potato cytosol 51.01 98.7
CDY65072 Canola cytosol 98.66 98.66
PGSC0003DMT400058435 Potato cytosol 98.66 98.66
Solyc01g008950.2.1 Tomato nucleus 98.66 98.66
Solyc10g081170.1.1 Tomato extracellular 98.66 98.66
VIT_08s0040g00470.t01 Wine grape cytosol 98.66 98.66
CDX92401 Canola cytosol 88.59 98.51
GSMUA_Achr5P27590_001 Banana cytosol 76.51 98.28
GSMUA_Achr10P... Banana cytosol 97.99 97.99
GSMUA_Achr6P15990_001 Banana cytosol 97.99 97.99
GSMUA_Achr9P17280_001 Banana cytosol 97.99 97.99
Os01t0267900-01 Rice cytosol 97.99 97.99
Os01t0279300-01 Rice cytosol, plasma membrane, plastid 97.99 97.99
Os03t0319300-01 Rice cytosol, extracellular, nucleus 97.99 97.99
Os07t0687200-02 Rice cytosol 97.99 97.99
CDY55678 Canola cytosol 97.32 97.32
GSMUA_Achr10P... Banana cytosol, plasma membrane 97.32 97.32
GSMUA_Achr3P09330_001 Banana cytosol 97.32 97.32
GSMUA_Achr5P07820_001 Banana cytosol 97.32 97.32
GSMUA_Achr6P23670_001 Banana cytosol 97.32 97.32
KRG94975 Soybean nucleus 97.32 97.32
CDY12321 Canola cytosol 94.63 97.24
CDX96148 Canola cytosol 96.64 96.64
GSMUA_Achr2P01120_001 Banana cytosol 96.64 96.64
GSMUA_Achr3P25040_001 Banana cytosol 96.64 96.64
Os05t0491100-01 Rice cytosol, extracellular 96.64 96.64
PGSC0003DMT400054299 Potato cytosol 73.15 96.46
VIT_06s0009g01910.t01 Wine grape cytosol 98.66 96.08
Zm00001d008278_P001 Maize cytosol 81.88 96.06
CDY27651 Canola cytosol 95.97 95.33
CDX99690 Canola cytosol 95.3 95.3
GSMUA_Achr11P... Banana cytosol 65.1 95.1
TraesCS1A01G308800.1 Wheat cytosol 83.22 94.66
KRH18664 Soybean cytosol 83.22 88.57
TraesCS3A01G184500.1 Wheat cytosol 97.32 88.41
TraesCS3D01G188600.1 Wheat cytosol 97.99 87.43
Zm00001d038545_P001 Maize cytosol, mitochondrion 85.23 85.23
TraesCS3B01G219900.1 Wheat cytosol 98.66 84.48
PGSC0003DMT400014123 Potato mitochondrion 69.13 84.43
Zm00001d047597_P001 Maize cytosol 83.22 84.35
TraesCS2B01G113800.2 Wheat cytosol 97.99 83.43
CDY48191 Canola cytosol 98.66 82.12
CDX77060 Canola cytosol 98.66 81.67
CDX75970 Canola cytosol 61.74 80.7
AT2G27030.3 Thale cress cytosol 97.99 80.66
TraesCS3A01G191900.1 Wheat cytosol 84.56 79.25
TraesCS3D01G194500.2 Wheat cytosol 84.56 79.25
TraesCS3A01G335000.1 Wheat cytosol 93.96 76.92
TraesCS3D01G328300.1 Wheat cytosol 93.96 76.92
HORVU3Hr1G079210.4 Barley cytosol 93.96 76.09
TraesCS3B01G365900.1 Wheat cytosol 92.62 75.41
Zm00001d038543_P004 Maize plastid 85.23 75.15
KRG89812 Soybean cytosol, mitochondrion 82.55 74.55
PGSC0003DMT400097662 Potato cytosol, mitochondrion 85.23 73.41
HORVU3Hr1G038010.1 Barley cytosol, plastid 97.99 73.37
CDX92965 Canola cytosol 74.5 72.08
CDY34215 Canola cytosol 75.17 71.79
CDY10686 Canola cytosol 74.5 71.61
CDX94883 Canola cytosol 53.02 71.17
CDY30947 Canola cytosol 99.33 70.81
EES01631 Sorghum cytosol 85.23 69.02
Zm00001d043144_P001 Maize plasma membrane 83.89 68.31
CDY10325 Canola cytosol 51.68 68.14
HORVU2Hr1G016740.4 Barley cytosol 97.99 67.91
CDY06478 Canola cytosol 67.79 66.89
CDY21220 Canola cytosol 98.66 66.52
Os01t0810300-01 Rice plasma membrane 83.22 66.31
Zm00001d028948_P001 Maize cytosol 86.58 65.48
CDY57144 Canola cytosol 63.76 65.07
GSMUA_Achr10P... Banana cytosol 79.19 62.43
GSMUA_Achr10P... Banana cytosol 78.52 62.23
CDY40824 Canola cytosol 75.17 62.22
TraesCS5D01G068100.1 Wheat cytosol 67.79 61.96
Zm00001d041430_P001 Maize cytosol 69.8 61.54
TraesCS5A01G057100.1 Wheat cytosol 67.79 61.21
EES09201 Sorghum cytosol 73.83 61.11
TraesCS5B01G137100.1 Wheat cytosol 73.83 61.11
EES16322 Sorghum cytosol 71.81 60.8
TraesCS5A01G057200.1 Wheat cytosol 66.44 60.74
HORVU5Hr1G044710.4 Barley cytosol 73.15 60.56
TraesCS5A01G139700.1 Wheat cytosol 73.15 60.56
TraesCS5D01G153400.1 Wheat cytosol 73.15 60.56
Os12t0603800-00 Rice cytosol 67.11 60.24
TraesCS5D01G068000.1 Wheat cytosol 67.79 60.12
HORVU5Hr1G014070.2 Barley cytosol 66.44 59.64
TraesCS5B01G059900.1 Wheat cytosol 67.11 59.52
Zm00001d005003_P002 Maize cytosol 71.14 58.89
Zm00001d052415_P001 Maize cytosol 62.42 58.86
CDX98074 Canola cytosol 47.65 47.97
CDY21044 Canola cytosol 47.65 47.97
CDY30070 Canola cytosol 47.65 47.97
CDY31259 Canola cytosol 47.65 47.97
CDY26556 Canola cytosol 46.98 47.3
Os05t0491000-01 Rice cytosol 48.99 47.1
HORVU5Hr1G014060.1 Barley cytosol, plastid 67.11 46.73
CDY15991 Canola cytosol 46.31 46.62
HORVU0Hr1G001280.1 Barley cytosol 46.31 45.7
TraesCS1A01G308700.1 Wheat cytosol 46.31 45.39
TraesCS1B01G319300.1 Wheat cytosol 45.64 45.33
TraesCS1D01G308000.1 Wheat cytosol 45.64 45.33
TraesCS4B01G131100.1 Wheat cytosol 67.11 43.29
Zm00001d010649_P001 Maize extracellular 40.94 42.96
TraesCS4D01G126100.1 Wheat cytosol 68.46 42.32
HORVU4Hr1G026290.3 Barley cytosol, plastid 62.42 42.08
OQU78227 Sorghum cytosol 48.32 40.22
CDY58544 Canola cytosol 44.3 39.05
CDY54677 Canola cytosol 42.95 38.55
CDY61824 Canola cytosol 42.95 38.55
CDY59874 Canola cytosol 38.93 36.02
CDY26151 Canola cytosol 37.58 35.67
CDX75623 Canola extracellular 42.95 35.56
CDY04172 Canola cytosol 38.26 35.4
CDX81878 Canola cytosol 36.91 35.26
CDY21702 Canola cytosol 36.91 35.26
CDY48076 Canola cytosol 38.26 35.19
CDY51605 Canola cytosol 38.26 35.19
CDX83123 Canola golgi 44.97 35.08
CDY19221 Canola cytosol 36.91 35.03
CDY62753 Canola cytosol 45.64 34.0
GSMUA_Achr8P05790_001 Banana cytosol 46.31 28.16
Protein Annotations
EnsemblPlants:CDY56411EnsemblPlantsGene:GSBRNA2T00019562001Gene3D:1.10.238.10GO:A0A078EV53GO:GO:0003674GO:GO:0005488
GO:GO:0005509InterPro:EF-hand-dom_pairInterPro:EF_Hand_1_Ca_BSInterPro:EF_hand_domInterPro:IPR002048PANTHER:PTHR23050
PANTHER:PTHR23050:SF250PFAM:PF13499PFscan:PS50222ProteinID:CDY56411ProteinID:CDY56411.1ScanProsite:PS00018
SMART:SM00054SUPFAM:SSF47473UniParc:UPI000151E3D5UniProt:A0A078EV53MapMan:35.1:
Description
BnaC04g54820DBnaA07g13000D protein [Source:UniProtKB/TrEMBL;Acc:A0A078EV53]
Coordinates
chrLK033487:+:5841..6737
Molecular Weight (calculated)
16820.5 Da
IEP (calculated)
3.871
GRAVY (calculated)
-0.621
Length
149 amino acids
Sequence
(BLAST)
001: MADQLTDDQI SEFKEAFSLF DKDGDGCITT KELGTVMRSL GQNPTEAELQ DMINEVDADG NGTIDFPEFL NLMARKMKDT DSEEELKEAF RVFDKDQNGF
101: ISAAELRHVM TNLGEKLTDE EVDEMVREAD VDGDGQINYD EFVKVMMAK
Best Arabidopsis Sequence Match ( AT2G27030.1 )
(BLAST)
001: MADQLTDDQI SEFKEAFSLF DKDGDGCITT KELGTVMRSL GQNPTEAELQ DMINEVDADG NGTIDFPEFL NLMARKMKDT DSEEELKEAF RVFDKDQNGF
101: ISAAELRHVM TNLGEKLTDE EVDEMIKEAD VDGDGQINYE EFVKVMMAK
Arabidopsis Description
CAM5Calmodulin 5 [Source:UniProtKB/TrEMBL;Acc:F4IVN6]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.